Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- vacuole 1
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026324.1-P | Field mustard | cytosol | 100.0 | 100.0 |
| GSMUA_Achr4P16480_001 | Banana | cytosol | 16.67 | 46.88 |
| GSMUA_Achr8P31000_001 | Banana | cytosol | 26.67 | 38.1 |
| CDY50760 | Canola | cytosol | 73.33 | 25.19 |
| CDY41904 | Canola | cytosol | 73.33 | 25.19 |
| CDX74165 | Canola | cytosol | 72.22 | 24.81 |
| CDY40680 | Canola | cytosol | 71.11 | 24.43 |
| CDX75453 | Canola | cytosol | 70.0 | 24.05 |
| CDY45324 | Canola | cytosol, extracellular | 68.89 | 23.75 |
| CDX72495 | Canola | cytosol | 68.89 | 23.75 |
| CDX69078 | Canola | cytosol, extracellular | 68.89 | 23.66 |
| CDX76296 | Canola | cytosol | 67.78 | 23.37 |
| AT3G04840.1 | Thale cress | cytosol | 65.56 | 22.52 |
| CDY30019 | Canola | plasma membrane | 73.33 | 21.85 |
| CDY17474 | Canola | cytosol | 58.89 | 21.63 |
| KRG91350 | Soybean | nucleus | 60.0 | 20.69 |
| PGSC0003DMT400019867 | Potato | cytosol | 58.89 | 20.38 |
| KRH35477 | Soybean | nucleus | 58.89 | 20.31 |
| Solyc06g072490.2.1 | Tomato | cytosol, nucleus, plastid, unclear | 58.89 | 20.31 |
| Solyc09g082520.2.1 | Tomato | cytosol, nucleus | 57.78 | 20.0 |
| PGSC0003DMT400069575 | Potato | cytosol | 57.78 | 19.92 |
| PGSC0003DMT400083968 | Potato | cytosol | 57.78 | 19.92 |
| KRH77835 | Soybean | nucleus | 57.78 | 19.92 |
| KRH27653 | Soybean | endoplasmic reticulum | 57.78 | 19.92 |
| Solyc03g097900.2.1 | Tomato | cytosol, nucleus, unclear | 56.67 | 19.54 |
| OQU92889 | Sorghum | cytosol | 51.11 | 19.25 |
| VIT_14s0030g01810.t01 | Wine grape | cytosol | 55.56 | 19.16 |
| GSMUA_Achr3P30060_001 | Banana | cytosol | 55.56 | 19.16 |
| VIT_05s0020g03900.t01 | Wine grape | cytosol | 55.56 | 19.16 |
| GSMUA_Achr1P22500_001 | Banana | cytosol | 54.44 | 18.77 |
| TraesCS4A01G044700.1 | Wheat | cytosol, golgi, unclear | 54.44 | 18.63 |
| GSMUA_Achr6P24760_001 | Banana | cytosol | 53.33 | 18.46 |
| GSMUA_Achr5P08700_001 | Banana | cytosol | 53.33 | 18.39 |
| Os03t0200500-01 | Rice | nucleus | 53.33 | 18.32 |
| TraesCS4D01G260400.1 | Wheat | cytosol, golgi, nucleus, unclear | 53.33 | 18.25 |
| TraesCS4B01G260600.1 | Wheat | cytosol, nucleus, unclear | 53.33 | 18.25 |
| EER99658 | Sorghum | cytosol | 53.33 | 18.25 |
| EER99659 | Sorghum | cytosol | 53.33 | 18.25 |
| KRH53243 | Soybean | cytosol, endoplasmic reticulum | 53.33 | 18.18 |
| Zm00001d048157_P001 | Maize | cytosol | 52.22 | 18.08 |
| Zm00001d028117_P002 | Maize | cytosol | 52.22 | 18.08 |
| Zm00001d048159_P001 | Maize | cytosol | 52.22 | 18.08 |
| KXG39941 | Sorghum | cytosol | 51.11 | 17.69 |
| Os02t0287000-02 | Rice | cytosol, golgi, nucleus, plasma membrane | 52.22 | 17.28 |
| KRH37543 | Soybean | cytosol | 41.11 | 17.21 |
| HORVU4Hr1G070370.1 | Barley | cytosol, plastid | 52.22 | 16.26 |
| OQU90205 | Sorghum | mitochondrion | 51.11 | 16.03 |
| HORVU1Hr1G032060.4 | Barley | cytosol | 48.89 | 15.22 |
| Zm00001d048158_P002 | Maize | plastid | 52.22 | 14.6 |
| Zm00001d006766_P001 | Maize | cytosol | 17.78 | 12.4 |
| EER99660 | Sorghum | cytosol | 20.0 | 8.26 |
| GSMUA_Achr4P16490_001 | Banana | cytosol, mitochondrion | 2.22 | 0.73 |
| VIT_05s0094g00620.t01 | Wine grape | cytosol | 0.0 | 0.0 |
| HORVU6Hr1G080910.1 | Barley | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY52999 | EnsemblPlantsGene:GSBRNA2T00008292001 | PANTHER:PTHR11830 | PANTHER:PTHR11830:SF12 | ProteinID:CDY52999 | ProteinID:CDY52999.1 |
| UniParc:UPI0002545919 | UniProt:A0A078IU63 | MapMan:35.1 | : | : | : |
Description
BnaAnng11930DBnaAnng11930D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IU63]
Coordinates
chrLK033150:-:61441..61820
Molecular Weight (calculated)
9849.8 Da
IEP (calculated)
4.895
GRAVY (calculated)
-0.348
Length
90 amino acids
Sequence
(BLAST)
(BLAST)
1: MREIMIKEAS SCDLKELVAK FIPESIGKDI EKANSGHLPS SECFHPLSQD PKFDLGKKLK EALHGDYTAV DVGVKVDRPA VEEPTEIIGA
001: MAVGKNKRIS KGRKGGKKKA VDPFSKKDWY DVKAPGSFTN RNVGKTLVSR TQGTKIASEG LKHRVFEVSL ADLQNDEDNA YRKIRLRAED VQGRNVLTQF
101: WGMDFTTDKL RSLVKKWQTL IEAHVDVKTT DGYTLRMFCI AFTKRRANQV KRTCYAQSSQ IRQIRRKMSE IMVKEASSCD LKELVAKFIP EAIGREIEKA
201: TQGIYPLQNV FIRKVKILKA PKFDLGKLME VHGDYTAEDV GVKVDRPADE TMVEEPTEII GA
101: WGMDFTTDKL RSLVKKWQTL IEAHVDVKTT DGYTLRMFCI AFTKRRANQV KRTCYAQSSQ IRQIRRKMSE IMVKEASSCD LKELVAKFIP EAIGREIEKA
201: TQGIYPLQNV FIRKVKILKA PKFDLGKLME VHGDYTAEDV GVKVDRPADE TMVEEPTEII GA
Arabidopsis Description
RPS3AB40S ribosomal protein S3a [Source:UniProtKB/TrEMBL;Acc:A0A178UZT1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.