CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 2
plastid 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER99660	Sorghum	cytosol	68.64	90.37
OQU92889	Sorghum	cytosol	73.52	88.28
EER99659	Sorghum	cytosol	79.44	86.69
EER99658	Sorghum	cytosol	79.09	86.31
KXG39941	Sorghum	cytosol	76.66	84.62
Zm00001d006766_P001	Maize	cytosol	37.63	83.72
Os03t0200500-01	Rice	nucleus	75.61	82.82
GSMUA_Achr3P30060_001	Banana	cytosol	71.78	78.93
GSMUA_Achr1P22500_001	Banana	cytosol	71.08	78.16
VIT_05s0020g03900.t01	Wine grape	cytosol	70.38	77.39
VIT_14s0030g01810.t01	Wine grape	cytosol	70.03	77.01
KRH77835	Soybean	nucleus	69.69	76.63
PGSC0003DMT400069575	Potato	cytosol	69.34	76.25
KRH27653	Soybean	endoplasmic reticulum	69.34	76.25
GSMUA_Achr6P24760_001	Banana	cytosol	68.99	76.15
Solyc06g072490.2.1	Tomato	cytosol, nucleus, plastid, unclear	68.99	75.86
Solyc03g097900.2.1	Tomato	cytosol, nucleus, unclear	68.99	75.86
GSMUA_Achr5P08700_001	Banana	cytosol	68.99	75.86
CDX76296	Canola	cytosol	68.64	75.48
PGSC0003DMT400083968	Potato	cytosol	68.64	75.48
KRH35477	Soybean	nucleus	68.64	75.48
KRG91350	Soybean	nucleus	68.64	75.48
Bra034643.1-P	Field mustard	cytosol	68.64	75.48
PGSC0003DMT400019867	Potato	cytosol	67.94	75.0
CDX69078	Canola	cytosol, extracellular	68.29	74.81
CDY50760	Canola	cytosol	68.29	74.81
CDX75453	Canola	cytosol	68.29	74.81
CDY41904	Canola	cytosol	68.29	74.81
CDX72495	Canola	cytosol	67.94	74.71
CDY45324	Canola	cytosol, extracellular	67.94	74.71
Bra017669.1-P	Field mustard	cytosol	67.94	74.71
Solyc09g082520.2.1	Tomato	cytosol, nucleus	67.6	74.62
Bra040409.1-P	Field mustard	cytosol	67.94	74.43
Bra011551.1-P	Field mustard	cytosol	67.94	74.43
CDY17474	Canola	cytosol	63.41	74.29
CDX74165	Canola	cytosol	67.6	74.05
Bra001127.1-P	Field mustard	cytosol	67.6	74.05
Bra040119.1-P	Field mustard	cytosol	67.25	73.95
VIT_05s0094g00620.t01	Wine grape	cytosol	27.53	73.83
AT4G34670.1	Thale cress	cytosol	67.25	73.66
CDY40680	Canola	cytosol	67.25	73.66
AT3G04840.1	Thale cress	cytosol	66.55	72.9
GSMUA_Achr8P31000_001	Banana	cytosol	15.68	71.43
KRH53243	Soybean	cytosol, endoplasmic reticulum	62.37	67.8
CDY30019	Canola	plasma membrane	68.64	65.23
KRH37543	Soybean	cytosol	40.77	54.42
GSMUA_Achr4P16480_001	Banana	cytosol	5.92	53.12
CDY52999	Canola	cytosol	16.03	51.11
Bra026324.1-P	Field mustard	cytosol	16.03	51.11
GSMUA_Achr4P16490_001	Banana	cytosol, mitochondrion	36.93	38.55

Protein Annotations

MapMan:17.1.3.1.4	UniProt:A0A1W0W7A2	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0005840	GO:GO:0006412
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	GO:GO:0022627
GO:GO:0030529	HAMAP:MF_03122	EnsemblPlants:OQU90205	ProteinID:OQU90205	ProteinID:OQU90205.1	PFAM:PF01015
ScanProsite:PS01191	PANTHER:PTHR11830	PANTHER:PTHR11830:SF13	InterPro:Ribosomal_S1/3_euk	InterPro:Ribosomal_S3Ae	InterPro:Ribosomal_S3Ae_CS
SMART:SM01397	EnsemblPlantsGene:SORBI_3002G364301	UniParc:UPI0009DC8632	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr2:-:72508158..72513413

Molecular Weight (calculated)

31946.8 Da

IEP (calculated)

10.393

GRAVY (calculated)

-0.395

Length

287 amino acids

Sequence
(BLAST)

001: MKGEHPALFV QLLLRPCKST GLPPSALAAP ASADGRNSHA VGKNKSISKS KKGGKKKTVD PFSKKDWYDI KAPSVFSVRN IGKTLVSRTQ GTKIASEGLK
101: NRVFEASLAD LQSDEDQAYM KIRLRAEDVQ GRNVLTNFWG MSFTIDKLRS LVKKWQTLIE AHVDVKTADN YMLRLFCIGF TKRRPNQIRR KMTEIMSNQA
201: SSCDLKELVS KFIPEVIGKE IEKATSSIFP LQNVFIRKVK ILKAPKFDIG KLMEVHGDYA KDDVGVHIER PAEGDLAMGG HEVAASE

Best Arabidopsis Sequence Match ( AT4G34670.1 )
(BLAST)

001: MAVGKNKRIS KGRKGGKKKA VDPFSKKDWY DVKAPGSFTN RNVGKTLVSR TQGTKIASEG LKHRVFEVSL ADLQNDEDNA YRKIRLRAED VQGRNVLTQF
101: WGMDFTTDKL RSLVKKWQTL IEAHVDVKTT DGYTLRMFCI AFTKRRANQV KRTCYAQSSQ IRQIRRKMSE IMVKEASSCD LKELVAKFIP EAIGREIEKA
201: TQGIYPLQNV FIRKVKILKA PKFDLGKLME VHGDYTAEDV GVKVDRPADE TMVEEPTEII GA

Arabidopsis Description

RPS3AB40S ribosomal protein S3a [Source:UniProtKB/TrEMBL;Acc:A0A178UZT1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.