Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG39941 | Sorghum | cytosol | 96.65 | 88.85 |
| EER99659 | Sorghum | cytosol | 93.31 | 84.79 |
| EER99658 | Sorghum | cytosol | 92.89 | 84.41 |
| Os03t0200500-01 | Rice | nucleus | 92.05 | 83.97 |
| EER99660 | Sorghum | cytosol | 73.22 | 80.28 |
| GSMUA_Achr3P30060_001 | Banana | cytosol | 86.19 | 78.93 |
| GSMUA_Achr1P22500_001 | Banana | cytosol | 85.36 | 78.16 |
| GSMUA_Achr6P24760_001 | Banana | cytosol | 84.1 | 77.31 |
| PGSC0003DMT400069575 | Potato | cytosol | 84.1 | 77.01 |
| Solyc06g072490.2.1 | Tomato | cytosol, nucleus, plastid, unclear | 83.68 | 76.63 |
| VIT_05s0020g03900.t01 | Wine grape | cytosol | 83.26 | 76.25 |
| Solyc03g097900.2.1 | Tomato | cytosol, nucleus, unclear | 83.26 | 76.25 |
| PGSC0003DMT400083968 | Potato | cytosol | 83.26 | 76.25 |
| VIT_14s0030g01810.t01 | Wine grape | cytosol | 82.85 | 75.86 |
| KRH77835 | Soybean | nucleus | 82.85 | 75.86 |
| GSMUA_Achr5P08700_001 | Banana | cytosol | 82.85 | 75.86 |
| PGSC0003DMT400019867 | Potato | cytosol | 82.43 | 75.77 |
| KRH27653 | Soybean | endoplasmic reticulum | 82.43 | 75.48 |
| Solyc09g082520.2.1 | Tomato | cytosol, nucleus | 82.01 | 75.38 |
| CDY45324 | Canola | cytosol, extracellular | 82.01 | 75.1 |
| Bra017669.1-P | Field mustard | cytosol | 82.01 | 75.1 |
| CDX76296 | Canola | cytosol | 82.01 | 75.1 |
| CDX72495 | Canola | cytosol | 82.01 | 75.1 |
| CDX75453 | Canola | cytosol | 82.01 | 74.81 |
| CDX69078 | Canola | cytosol, extracellular | 82.01 | 74.81 |
| Bra034643.1-P | Field mustard | cytosol | 81.59 | 74.71 |
| KRH35477 | Soybean | nucleus | 81.59 | 74.71 |
| KRG91350 | Soybean | nucleus | 81.59 | 74.71 |
| CDY41904 | Canola | cytosol | 81.59 | 74.43 |
| Bra011551.1-P | Field mustard | cytosol | 81.59 | 74.43 |
| CDY50760 | Canola | cytosol | 81.59 | 74.43 |
| AT3G04840.1 | Thale cress | cytosol | 81.17 | 74.05 |
| Bra001127.1-P | Field mustard | cytosol | 81.17 | 74.05 |
| Bra040409.1-P | Field mustard | cytosol | 81.17 | 74.05 |
| CDY17474 | Canola | cytosol | 75.73 | 73.88 |
| CDX74165 | Canola | cytosol | 80.75 | 73.66 |
| CDY40680 | Canola | cytosol | 80.75 | 73.66 |
| AT4G34670.1 | Thale cress | cytosol | 80.75 | 73.66 |
| Bra040119.1-P | Field mustard | cytosol | 80.33 | 73.56 |
| OQU90205 | Sorghum | mitochondrion | 88.28 | 73.52 |
| GSMUA_Achr8P31000_001 | Banana | cytosol | 19.25 | 73.02 |
| VIT_05s0094g00620.t01 | Wine grape | cytosol | 31.38 | 70.09 |
| KRH53243 | Soybean | cytosol, endoplasmic reticulum | 74.06 | 67.05 |
| CDY30019 | Canola | plasma membrane | 81.17 | 64.24 |
| GSMUA_Achr4P16480_001 | Banana | cytosol | 7.95 | 59.38 |
| KRH37543 | Soybean | cytosol | 49.79 | 55.35 |
| Bra026324.1-P | Field mustard | cytosol | 19.25 | 51.11 |
| CDY52999 | Canola | cytosol | 19.25 | 51.11 |
| GSMUA_Achr4P16490_001 | Banana | cytosol, mitochondrion | 44.35 | 38.55 |
Protein Annotations
| MapMan:17.1.3.1.4 | UniProt:A0A1Z5SAK7 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0005840 | GO:GO:0006412 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0022627 |
| GO:GO:0030529 | HAMAP:MF_03122 | EnsemblPlants:OQU92889 | ProteinID:OQU92889 | ProteinID:OQU92889.1 | PFAM:PF01015 |
| ScanProsite:PS01191 | PANTHER:PTHR11830 | PANTHER:PTHR11830:SF13 | InterPro:Ribosomal_S1/3_euk | InterPro:Ribosomal_S3Ae | InterPro:Ribosomal_S3Ae_CS |
| SMART:SM01397 | EnsemblPlantsGene:SORBI_3001G431400 | UniParc:UPI000B8BB13A | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr1:+:71037019..71039276
Molecular Weight (calculated)
27153.1 Da
IEP (calculated)
10.305
GRAVY (calculated)
-0.461
Length
239 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVGKNKRIS KGKKGGKKKT VDPFSKKDWY DIKAPSVFSV RNIGKTSIAS EGLKHRVFEV CLADLQGDED QAYRKIRLRA EDVQGRNVLT NFWGMSFTTD
101: KLRSLVKKWQ TLIEAHVDVK TTDNYMLRLF CIGFTKRRPN QIRRKMVDIM VNQASSCDLK ELVSKFIPEV IGKEIEKATS SIFPLQNVFI RKVKILKAPK
201: FDLGKLMEVH GDYKEDVGVK LERPVEGDEA GQEVAATAE
101: KLRSLVKKWQ TLIEAHVDVK TTDNYMLRLF CIGFTKRRPN QIRRKMVDIM VNQASSCDLK ELVSKFIPEV IGKEIEKATS SIFPLQNVFI RKVKILKAPK
201: FDLGKLMEVH GDYKEDVGVK LERPVEGDEA GQEVAATAE
001: MAVGKNKRIS KGRKGGKKKA VDPFSKKDWY DVKAPSIFTH RNVGKTLVSR TQGTKIASEG LKHRVFEVSL ADLQGDEDNA YRKIRLRAED VQGRNVLCQF
101: WGMDFTTDKL RSLVKKWQTL IEAHVDVKTT DSYTLRLFCI AFTKRRANQV KRTCYAQSSQ IRQIRRKMRD IMVREASSCD LKDLVAKFIP EAIGREIEKA
201: TQGIYPLQNV FIRKVKILKA PKFDLGKLMD VHGDYSAEDV GVKVDRPADE MAVEEPTEII GA
101: WGMDFTTDKL RSLVKKWQTL IEAHVDVKTT DSYTLRLFCI AFTKRRANQV KRTCYAQSSQ IRQIRRKMRD IMVREASSCD LKDLVAKFIP EAIGREIEKA
201: TQGIYPLQNV FIRKVKILKA PKFDLGKLMD VHGDYSAEDV GVKVDRPADE MAVEEPTEII GA
Arabidopsis Description
RPS3AA40S ribosomal protein S3a-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAV0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.