Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_14s0060g01930.t01 | Wine grape | cytosol | 82.26 | 81.82 |
| AT5G27850.1 | Thale cress | nucleus | 79.57 | 79.14 |
| PGSC0003DMT400081310 | Potato | nucleus | 79.57 | 79.14 |
| KRG96455 | Soybean | nucleus | 79.57 | 79.14 |
| GSMUA_Achr9P16300_001 | Banana | cytosol, mitochondrion | 38.71 | 79.12 |
| AT3G05590.1 | Thale cress | nucleus | 79.03 | 78.61 |
| KRH68205 | Soybean | nucleus | 79.03 | 78.61 |
| KRH33871 | Soybean | nucleus | 79.03 | 78.61 |
| KRH68491 | Soybean | nucleus | 77.96 | 77.54 |
| KRG92914 | Soybean | nucleus | 77.96 | 77.54 |
| EES17748 | Sorghum | cytosol | 77.42 | 76.6 |
| Zm00001d022462_P001 | Maize | plastid | 76.88 | 76.47 |
| EER97722 | Sorghum | cytosol | 76.88 | 76.47 |
| OQU92626 | Sorghum | cytosol | 76.88 | 76.47 |
| PGSC0003DMT400063593 | Potato | cytosol | 76.34 | 75.94 |
| Zm00001d009848_P001 | Maize | cytosol | 76.34 | 75.94 |
| TraesCS1D01G105500.2 | Wheat | golgi | 75.81 | 75.0 |
| TraesCS1A01G096500.2 | Wheat | cytosol | 75.27 | 74.87 |
| TraesCS1B01G127200.1 | Wheat | cytosol | 75.27 | 74.87 |
| TraesCS4D01G169400.1 | Wheat | cytosol, unclear | 75.27 | 74.87 |
| GSMUA_Achr5P27080_001 | Banana | cytosol | 53.76 | 74.63 |
| Os05t0155100-01 | Rice | nucleus | 75.27 | 74.47 |
| TraesCS4B01G166800.1 | Wheat | cytosol | 74.73 | 74.33 |
| Os03t0341100-01 | Rice | nucleus | 74.73 | 74.33 |
| HORVU2Hr1G018820.1 | Barley | cytosol | 74.73 | 74.33 |
| VIT_05s0077g02070.t01 | Wine grape | cytosol | 58.6 | 74.15 |
| GSMUA_Achr11P... | Banana | cytosol | 53.23 | 73.88 |
| TraesCS2A01G109900.1 | Wheat | plastid | 74.19 | 73.8 |
| TraesCS2B01G127900.1 | Wheat | cytosol | 74.19 | 73.8 |
| TraesCS2D01G110100.1 | Wheat | golgi, unclear | 74.19 | 73.8 |
| Os07t0674700-01 | Rice | plasma membrane | 74.73 | 71.28 |
| GSMUA_Achr2P01730_001 | Banana | cytosol | 76.88 | 71.14 |
| VIT_07s0005g00690.t01 | Wine grape | plastid | 81.72 | 67.56 |
| VIT_05s0077g02060.t01 | Wine grape | mitochondrion | 24.19 | 66.18 |
| HORVU2Hr1G018840.4 | Barley | cytosol | 32.26 | 65.93 |
| HORVU1Hr1G022570.1 | Barley | cytosol, plasma membrane | 75.27 | 64.52 |
| KRG96775 | Soybean | mitochondrion, nucleus | 77.96 | 64.16 |
| Zm00001d037603_P002 | Maize | cytosol | 76.34 | 61.74 |
| VIT_14s0036g01220.t01 | Wine grape | cytosol | 39.25 | 61.34 |
| GSMUA_Achr8P10280_001 | Banana | cytosol | 75.81 | 56.85 |
| CDY27753 | Canola | cytosol, mitochondrion | 22.04 | 34.75 |
| Bra039423.1-P | Field mustard | cytosol | 22.04 | 34.75 |
Protein Annotations
| MapMan:17.1.2.1.18 | Gene3D:3.100.10.10 | ArrayExpress:AT2G47570 | EnsemblPlantsGene:AT2G47570 | RefSeq:AT2G47570 | TAIR:AT2G47570 |
| RefSeq:AT2G47570-TAIR-G | EnsemblPlants:AT2G47570.1 | TAIR:AT2G47570.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005829 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0022625 | GO:GO:0030529 | InterPro:L18e/L15P_sf |
| PFAM:PF17135 | PANTHER:PTHR10934 | PANTHER:PTHR10934:SF9 | InterPro:Ribosomal_L18e | InterPro:Ribosomal_L18e/L15P | SUPFAM:SSF52080 |
| UniParc:UPI000848A40A | : | : | : | : | : |
Description
Ribosomal protein L18e/L15 superfamily protein [Source:TAIR;Acc:AT2G47570]
Coordinates
chr2:-:19515764..19516922
Molecular Weight (calculated)
20806.6 Da
IEP (calculated)
11.207
GRAVY (calculated)
-0.420
Length
186 amino acids
Sequence
(BLAST)
(BLAST)
001: IDLIAGGKSK KTKRTEPKSD DVYLKLLVKA NRYLVRRTES KFNAVILKRL FMSKVNKAPL SLSRLVRYMD GKDGKIAVIV GTVTDDVRIE DVPALTVTAL
101: RFTESARARI HKAGGECLTF DQLALPCPTW SENTVLLRGP KNTREAVKHF GPAPGVPHSH TKPYVRQTGK KIEIARGRRR SRGFKV
101: RFTESARARI HKAGGECLTF DQLALPCPTW SENTVLLRGP KNTREAVKHF GPAPGVPHSH TKPYVRQTGK KIEIARGRRR SRGFKV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.