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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 2
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:plastid
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU3Hr1G066430.1 Barley cytosol 100.0 100.0
TraesCS3D01G253300.1 Wheat cytosol 100.0 100.0
TraesCS3A01G252700.1 Wheat cytosol, golgi 98.6 98.6
EES01347 Sorghum cytosol 88.81 87.59
Os01t0706500-00 Rice plastid 88.11 86.9
TraesCS1B01G380800.1 Wheat golgi 82.52 80.27
Solyc12g044720.1.1 Tomato nucleus 29.37 77.78
TraesCS7B01G324000.1 Wheat plastid 52.45 72.12
TraesCS3B01G505000.1 Wheat golgi 55.94 70.8
TraesCS7B01G281500.1 Wheat cytosol 54.55 69.03
PGSC0003DMT400012339 Potato cytosol 67.83 67.83
KRH09991 Soybean cytosol, endoplasmic reticulum 70.63 67.33
Solyc03g121330.2.1 Tomato nucleus 67.13 67.13
PGSC0003DMT400006681 Potato extracellular 67.13 67.13
PGSC0003DMT400016607 Potato cytosol 67.13 67.13
GSMUA_Achr1P05120_001 Banana cytosol 69.23 66.89
KRH47170 Soybean endoplasmic reticulum 69.93 66.67
KRH44206 Soybean nucleus 69.93 66.67
VIT_04s0008g00790.t01 Wine grape cytosol 67.13 66.67
CDY14213 Canola cytosol 66.43 66.43
Bra011106.1-P Field mustard cytosol 66.43 66.43
Bra010329.1-P Field mustard cytosol 66.43 66.43
VIT_09s0002g02560.t01 Wine grape cytosol 68.53 65.77
AT2G19730.2 Thale cress cytosol 65.73 65.73
Bra024145.1-P Field mustard cytosol 65.73 65.73
Bra031093.1-P Field mustard cytosol 65.73 65.73
Bra036710.1-P Field mustard cytosol 65.73 65.73
CDX81940 Canola cytosol 65.73 65.73
CDX82715 Canola cytosol 65.73 65.73
CDY30215 Canola cytosol 65.73 65.73
CDY21652 Canola cytosol 65.73 65.73
CDY62032 Canola cytosol 65.73 65.73
KRH23342 Soybean endoplasmic reticulum 68.53 65.33
Bra039014.1-P Field mustard cytosol 65.03 65.03
CDY35881 Canola cytosol 65.03 65.03
AT4G29410.1 Thale cress cytosol 64.34 64.34
CDY06809 Canola extracellular 67.13 56.47
GSMUA_Achr5P09610_001 Banana plasma membrane 72.03 55.98
CDY43499 Canola mitochondrion 67.13 55.49
Solyc06g062500.2.1 Tomato endoplasmic reticulum, plastid 45.45 54.62
CDY03348 Canola plastid 65.73 53.71
CDY41134 Canola cytosol 22.38 53.33
Bra033205.1-P Field mustard cytosol 22.38 53.33
KRH45415 Soybean mitochondrion 25.87 52.86
GSMUA_Achr6P33480_001 Banana nucleus 68.53 49.49
CDX91669 Canola mitochondrion 21.68 47.69
CDY48720 Canola cytosol 65.73 46.31
GSMUA_Achr1P28120_001 Banana mitochondrion 72.03 44.4
CDY47764 Canola cytosol 54.55 39.8
Bra001548.1-P Field mustard nucleus 25.17 30.25
Protein Annotations
EnsemblPlants:TraesCS3B01G284300.1EnsemblPlantsGene:TraesCS3B01G284300Gene3D:3.30.390.110GO:GO:0003674GO:GO:0003735GO:GO:0005198
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005840GO:GO:0006412
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0019538InterPro:L28e/Mak16
InterPro:Ribosomal_L28ePANTHER:PTHR10544PANTHER:PTHR10544:SF5PFAM:PF01778MapMan:17.1.2.1.29:
Description
No Description!
Coordinates
chr3B:-:455065788..455066856
Molecular Weight (calculated)
16259.8 Da
IEP (calculated)
10.998
GRAVY (calculated)
-0.692
Length
143 amino acids
Sequence
(BLAST)
001: MATVSDSLVW ELVRKNNCFL IKQFGNSNAK VQFSKEPNNL YNVHSYKYSG LANKKTVTVQ PAAEKEMTVV LSTTKSKKQN KPAAFTHKTV MRKEFRKMAK
101: AVKNQVSDNY YRPDLTKPAL ARLSAVYRSL QVAKSGVKKK NRQ
Best Arabidopsis Sequence Match ( AT2G19730.2 )
(BLAST)
001: MATVPGQLIW EIVKNNNCFL VKQFGRGNSK VQFSKETNNL TNVHSYKHSG LANKKTVTIQ AADKDQAVVL ATTKTKKQNK PKLSVNKSIL KKEFPRMSKA
101: VANQVVDNYY RPDLKKAALA RLSAISKGLR VAKSGAKQRN RQA
Arabidopsis Description
RPL28A60S ribosomal protein L28-1 [Source:UniProtKB/Swiss-Prot;Acc:O82204]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.