Factsheet for AT2G19730.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra031093.1-P	Field mustard	cytosol	91.61	91.61
CDX81940	Canola	cytosol	91.61	91.61
Bra039014.1-P	Field mustard	cytosol	90.91	90.91
CDY21652	Canola	cytosol	90.91	90.91
CDY35881	Canola	cytosol	90.91	90.91
Bra036710.1-P	Field mustard	cytosol	90.21	90.21
CDX82715	Canola	cytosol	90.21	90.21
AT4G29410.1	Thale cress	cytosol	90.21	90.21
Solyc12g044720.1.1	Tomato	nucleus	29.37	77.78
PGSC0003DMT400016607	Potato	cytosol	74.83	74.83
VIT_04s0008g00790.t01	Wine grape	cytosol	74.83	74.31
CDY03348	Canola	plastid	90.21	73.71
PGSC0003DMT400006681	Potato	extracellular	73.43	73.43
Solyc03g121330.2.1	Tomato	nucleus	73.43	73.43
PGSC0003DMT400012339	Potato	cytosol	73.43	73.43
VIT_09s0002g02560.t01	Wine grape	cytosol	75.52	72.48
KRH09991	Soybean	cytosol, endoplasmic reticulum	73.43	70.0
KRH47170	Soybean	endoplasmic reticulum	72.73	69.33
KRH23342	Soybean	endoplasmic reticulum	72.03	68.67
KRH44206	Soybean	nucleus	72.03	68.67
KXG22440	Sorghum	cytosol	69.93	68.49
EES01347	Sorghum	cytosol	69.23	68.28
Os01t0706500-00	Rice	plastid	69.23	68.28
GSMUA_Achr1P05120_001	Banana	cytosol	69.93	67.57
Zm00001d009417_P006	Maize	cytosol	69.23	67.35
HORVU3Hr1G066430.1	Barley	cytosol	65.73	65.73
TraesCS3A01G252700.1	Wheat	cytosol, golgi	65.73	65.73
TraesCS3B01G284300.1	Wheat	cytosol	65.73	65.73
TraesCS3D01G253300.1	Wheat	cytosol	65.73	65.73
CDY48720	Canola	cytosol	90.21	63.55
TraesCS1D01G368700.1	Wheat	nucleus	65.03	63.27
HORVU1Hr1G079370.1	Barley	cytosol, peroxisome, plastid	65.03	63.27
TraesCS1B01G380800.1	Wheat	golgi	64.34	62.59
Os05t0541900-01	Rice	cytosol, golgi, nucleus, plasma membrane, plastid	56.64	60.9
Os02t0821200-01	Rice	plastid	39.16	60.87
TraesCS2D01G587700.1	Wheat	cytosol, plastid	45.45	60.75
Solyc06g062500.2.1	Tomato	endoplasmic reticulum, plastid	49.65	59.66
TraesCS5D01G549700.1	Wheat	cytosol	43.36	59.62
TraesCS3A01G379600.1	Wheat	cytosol	44.06	58.33
TraesCS7B01G324000.1	Wheat	plastid	41.26	56.73
TraesCS3B01G505000.1	Wheat	golgi	44.76	56.64
TraesCS1A01G215000.1	Wheat	cytosol	42.66	56.48
GSMUA_Achr5P09610_001	Banana	plasma membrane	72.03	55.98
TraesCS7B01G281500.1	Wheat	cytosol	44.06	55.75
KRH45415	Soybean	mitochondrion	27.27	55.71
Zm00001d038865_P003	Maize	cytosol, mitochondrion, nucleus, plastid	68.53	51.85
GSMUA_Achr6P33480_001	Banana	nucleus	69.23	50.0
TraesCS1A01G363700.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	65.03	47.21
GSMUA_Achr1P28120_001	Banana	mitochondrion	70.63	43.53
TraesCS6D01G263800.1	Wheat	cytosol	46.15	37.93
TraesCS5A01G102300.1	Wheat	cytosol	46.15	37.71
TraesCS3D01G497400.1	Wheat	cytosol	44.76	36.78
TraesCS6A01G220700.1	Wheat	cytosol	25.87	17.05

Protein Annotations

MapMan:17.1.2.1.29	Gene3D:3.30.390.110	EntrezGene:816492	UniProt:A0A178VXA5	ProteinID:AAC62149.1	ProteinID:AEC06918.1
ProteinID:AEC06919.1	ProteinID:AEC06920.1	ArrayExpress:AT2G19730	EnsemblPlantsGene:AT2G19730	RefSeq:AT2G19730	TAIR:AT2G19730
RefSeq:AT2G19730-TAIR-G	EnsemblPlants:AT2G19730.2	TAIR:AT2G19730.2	EMBL:AY050769	EMBL:AY079378	Unigene:At.12891
GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005618	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0005840	GO:GO:0005886	GO:GO:0006412
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009506	GO:GO:0009507	GO:GO:0009536
GO:GO:0009719	GO:GO:0009735	GO:GO:0009987	GO:GO:0016020	GO:GO:0019538	GO:GO:0022625
GO:GO:0022626	GO:GO:0030312	GO:GO:0030529	InterPro:L28e/Mak16	RefSeq:NP_001031374.1	RefSeq:NP_001077920.1
RefSeq:NP_179563.1	UniProt:O82204	ProteinID:OAP09673.1	PFAM:PF01778	PO:PO:0000013	PO:PO:0000037
PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185
PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115
PO:PO:0007123	PO:PO:0007131	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005
PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030
PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030
PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281	PANTHER:PTHR10544
PANTHER:PTHR10544:SF5	InterPro:Ribosomal_L28e	UniParc:UPI00000A71CF	:	:	:

Description

RPL28A60S ribosomal protein L28-1 [Source:UniProtKB/Swiss-Prot;Acc:O82204]

Coordinates

chr2:+:8511486..8513291

Molecular Weight (calculated)

15896.4 Da

IEP (calculated)

11.305

GRAVY (calculated)

-0.622

Length

143 amino acids

Sequence
(BLAST)

001: MATVPGQLIW EIVKNNNCFL VKQFGRGNSK VQFSKETNNL TNVHSYKHSG LANKKTVTIQ AADKDQAVVL ATTKTKKQNK PKLSVNKSIL KKEFPRMSKA
101: VANQVVDNYY RPDLKKAALA RLSAISKGLR VAKSGAKQRN RQA

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.