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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3D01G497400.1 Wheat cytosol 90.86 91.38
TraesCS7B01G281500.1 Wheat cytosol 57.71 89.38
TraesCS3B01G505000.1 Wheat golgi 57.71 89.38
TraesCS3A01G379600.1 Wheat cytosol 54.29 87.96
TraesCS1A01G215000.1 Wheat cytosol 53.71 87.04
HORVU1Hr1G079370.1 Barley cytosol, peroxisome, plastid 56.57 67.35
Os05t0541900-01 Rice cytosol, golgi, nucleus, plasma membrane, plastid 44.0 57.89
KXG22440 Sorghum cytosol 45.71 54.79
TraesCS6D01G263800.1 Wheat cytosol 54.29 54.6
TraesCS3A01G252700.1 Wheat cytosol, golgi 44.57 54.55
Zm00001d009417_P006 Maize cytosol 45.71 54.42
TraesCS1A01G363700.1 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole 58.29 51.78
KRH45415 Soybean mitochondrion 20.57 51.43
CDX91669 Canola mitochondrion 17.71 47.69
Solyc03g121330.2.1 Tomato nucleus 38.29 46.85
PGSC0003DMT400006681 Potato extracellular 37.71 46.15
AT2G19730.2 Thale cress cytosol 37.71 46.15
PGSC0003DMT400016607 Potato cytosol 37.14 45.45
PGSC0003DMT400012339 Potato cytosol 37.14 45.45
GSMUA_Achr1P05120_001 Banana cytosol 38.29 45.27
CDY30215 Canola cytosol 36.57 44.76
CDY35881 Canola cytosol 36.57 44.76
CDY14213 Canola cytosol 36.57 44.76
Bra039014.1-P Field mustard cytosol 36.57 44.76
CDY62032 Canola cytosol 36.57 44.76
Bra024145.1-P Field mustard cytosol 36.57 44.76
Bra011106.1-P Field mustard cytosol 36.57 44.76
Bra010329.1-P Field mustard cytosol 36.57 44.76
VIT_09s0002g02560.t01 Wine grape cytosol 37.71 44.3
AT4G29410.1 Thale cress cytosol 36.0 44.06
Bra036710.1-P Field mustard cytosol 36.0 44.06
CDX82715 Canola cytosol 36.0 44.06
KRH44206 Soybean nucleus 37.71 44.0
KRH47170 Soybean endoplasmic reticulum 37.71 44.0
Bra031093.1-P Field mustard cytosol 35.43 43.36
CDX81940 Canola cytosol 35.43 43.36
KRH09991 Soybean cytosol, endoplasmic reticulum 37.14 43.33
KRH23342 Soybean endoplasmic reticulum 37.14 43.33
VIT_04s0008g00790.t01 Wine grape cytosol 35.43 43.06
CDY21652 Canola cytosol 34.86 42.66
Os02t0821200-01 Rice plastid 22.29 42.39
Zm00001d038865_P003 Maize cytosol, mitochondrion, nucleus, plastid 44.0 40.74
CDY06809 Canola extracellular 38.29 39.41
CDY43499 Canola mitochondrion 38.86 39.31
GSMUA_Achr5P09610_001 Banana plasma membrane 40.0 38.04
CDY03348 Canola plastid 37.14 37.14
GSMUA_Achr6P33480_001 Banana nucleus 40.0 35.35
CDY48720 Canola cytosol 37.14 32.02
Bra001548.1-P Field mustard nucleus 21.14 31.09
GSMUA_Achr1P28120_001 Banana mitochondrion 41.14 31.03
Solyc06g062500.2.1 Tomato endoplasmic reticulum, plastid 19.43 28.57
TraesCS6A01G220700.1 Wheat cytosol 30.86 24.88
CDY47764 Canola cytosol 26.86 23.98
Solyc12g044720.1.1 Tomato nucleus 5.14 16.67
CDY41134 Canola cytosol 5.14 15.0
Bra033205.1-P Field mustard cytosol 5.14 15.0
Protein Annotations
EnsemblPlants:TraesCS5A01G102300.1EnsemblPlantsGene:TraesCS5A01G102300Gene3D:3.30.390.110GO:GO:0003674GO:GO:0003735GO:GO:0005198
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005840GO:GO:0006412
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0019538InterPro:L28e/Mak16
InterPro:Ribosomal_L28ePANTHER:PTHR10544PANTHER:PTHR10544:SF5PFAM:PF01778MapMan:17.1.2.1.29:
Description
No Description!
Coordinates
chr5A:+:155590440..155592258
Molecular Weight (calculated)
19474.3 Da
IEP (calculated)
10.326
GRAVY (calculated)
-0.651
Length
175 amino acids
Sequence
(BLAST)
001: MPKSGYAGRS ALVQGENQHH DSERQPPGGW WFPWGADLQC IPPPIHIQIS CVAGAGSTHR PGEMTTIPGS PVWELVKKNN YFLIKQFGNN TKVQFSKEPN
101: NLYNVHSYKF SGLANSKTVA VQPSAGEDKA VVLSTTKTKK QNTPAKLQHK TLMRKEFHKM TKSVKNQVLT PEFCT
Best Arabidopsis Sequence Match ( AT2G19730.1 )
(BLAST)
001: MATVPGQLIW EIVKNNNCFL VKQFGRGNSK VQFSKETNNL TNVHSYKHSG LANKKTVTIQ AADKDQAVVL ATTKTKKQNK PKLSVNKSIL KKEFPRMSKA
101: VANQVVDNYY RPDLKKAALA RLSAISKGLR VAKSGAKQRN RQA
Arabidopsis Description
RPL28A60S ribosomal protein L28-1 [Source:UniProtKB/Swiss-Prot;Acc:O82204]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.