Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra036710.1-P | Field mustard | cytosol | 70.44 | 100.0 |
| CDX82715 | Canola | cytosol | 70.44 | 100.0 |
| CDY35881 | Canola | cytosol | 69.95 | 99.3 |
| CDX81940 | Canola | cytosol | 68.47 | 97.2 |
| CDY21652 | Canola | cytosol | 67.49 | 95.8 |
| AT2G19730.2 | Thale cress | cytosol | 63.55 | 90.21 |
| CDY14213 | Canola | cytosol | 63.55 | 90.21 |
| CDY30215 | Canola | cytosol | 63.05 | 89.51 |
| CDY62032 | Canola | cytosol | 63.05 | 89.51 |
| CDY03348 | Canola | plastid | 71.43 | 82.86 |
| CDY06809 | Canola | extracellular | 64.53 | 77.06 |
| CDY43499 | Canola | mitochondrion | 65.52 | 76.88 |
| Solyc12g044720.1.1 | Tomato | nucleus | 19.7 | 74.07 |
| PGSC0003DMT400006681 | Potato | extracellular | 51.72 | 73.43 |
| PGSC0003DMT400016607 | Potato | cytosol | 51.72 | 73.43 |
| PGSC0003DMT400012339 | Potato | cytosol | 51.23 | 72.73 |
| Solyc03g121330.2.1 | Tomato | nucleus | 51.23 | 72.73 |
| VIT_04s0008g00790.t01 | Wine grape | cytosol | 51.23 | 72.22 |
| VIT_09s0002g02560.t01 | Wine grape | cytosol | 51.72 | 70.47 |
| KRH09991 | Soybean | cytosol, endoplasmic reticulum | 51.72 | 70.0 |
| CDY41134 | Canola | cytosol | 20.69 | 70.0 |
| KRH23342 | Soybean | endoplasmic reticulum | 50.74 | 68.67 |
| KRH47170 | Soybean | endoplasmic reticulum | 50.74 | 68.67 |
| KRH44206 | Soybean | nucleus | 50.25 | 68.0 |
| EES01347 | Sorghum | cytosol | 48.28 | 67.59 |
| Os01t0706500-00 | Rice | plastid | 48.28 | 67.59 |
| KXG22440 | Sorghum | cytosol | 48.28 | 67.12 |
| GSMUA_Achr1P05120_001 | Banana | cytosol | 48.28 | 66.22 |
| Zm00001d009417_P006 | Maize | cytosol | 47.78 | 65.99 |
| TraesCS3D01G253300.1 | Wheat | cytosol | 46.31 | 65.73 |
| TraesCS3A01G252700.1 | Wheat | cytosol, golgi | 46.31 | 65.73 |
| TraesCS3B01G284300.1 | Wheat | cytosol | 46.31 | 65.73 |
| HORVU3Hr1G066430.1 | Barley | cytosol | 46.31 | 65.73 |
| CDX91669 | Canola | mitochondrion | 19.7 | 61.54 |
| HORVU1Hr1G079370.1 | Barley | cytosol, peroxisome, plastid | 44.34 | 61.22 |
| TraesCS1D01G368700.1 | Wheat | nucleus | 44.34 | 61.22 |
| TraesCS1B01G380800.1 | Wheat | golgi | 43.84 | 60.54 |
| Os02t0821200-01 | Rice | plastid | 27.09 | 59.78 |
| TraesCS2D01G587700.1 | Wheat | cytosol, plastid | 31.03 | 58.88 |
| KRH45415 | Soybean | mitochondrion | 20.2 | 58.57 |
| Solyc06g062500.2.1 | Tomato | endoplasmic reticulum, plastid | 33.99 | 57.98 |
| Os05t0541900-01 | Rice | cytosol, golgi, nucleus, plasma membrane, plastid | 37.93 | 57.89 |
| TraesCS7B01G324000.1 | Wheat | plastid | 29.06 | 56.73 |
| TraesCS5D01G549700.1 | Wheat | cytosol | 29.06 | 56.73 |
| GSMUA_Achr5P09610_001 | Banana | plasma membrane | 51.23 | 56.52 |
| TraesCS3A01G379600.1 | Wheat | cytosol | 30.05 | 56.48 |
| TraesCS1A01G215000.1 | Wheat | cytosol | 29.06 | 54.63 |
| TraesCS3B01G505000.1 | Wheat | golgi | 30.05 | 53.98 |
| TraesCS7B01G281500.1 | Wheat | cytosol | 29.56 | 53.1 |
| Zm00001d038865_P003 | Maize | cytosol, mitochondrion, nucleus, plastid | 49.26 | 52.91 |
| CDY47764 | Canola | cytosol | 49.75 | 51.53 |
| GSMUA_Achr6P33480_001 | Banana | nucleus | 50.25 | 51.52 |
| TraesCS1A01G363700.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 45.32 | 46.7 |
| GSMUA_Achr1P28120_001 | Banana | mitochondrion | 52.71 | 46.12 |
| TraesCS6D01G263800.1 | Wheat | cytosol | 32.02 | 37.36 |
| TraesCS5A01G102300.1 | Wheat | cytosol | 32.02 | 37.14 |
| TraesCS3D01G497400.1 | Wheat | cytosol | 31.53 | 36.78 |
| TraesCS6A01G220700.1 | Wheat | cytosol | 20.2 | 18.89 |
Protein Annotations
| MapMan:17.1.2.1.29 | Gene3D:3.30.390.110 | GO:A0A078ICT9 | UniProt:A0A078ICT9 | EnsemblPlants:CDY48720 | ProteinID:CDY48720 |
| ProteinID:CDY48720.1 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00091611001 | InterPro:L28e/Mak16 | PFAM:PF01778 |
| PANTHER:PTHR10544 | PANTHER:PTHR10544:SF5 | InterPro:Ribosomal_L28e | UniParc:UPI0004EECEDA | SEG:seg | : |
Description
BnaA09g09950DBnaA09g09950D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ICT9]
Coordinates
chrLK032788:+:44425..46055
Molecular Weight (calculated)
22759.7 Da
IEP (calculated)
10.892
GRAVY (calculated)
-0.470
Length
203 amino acids
Sequence
(BLAST)
(BLAST)
001: MTPVVLQNES KTETEITQSF RFDDVFQHNI VFYKAPAPPL NPSLALTISH SLSAKFHGLE MATVPGQLIW EIVKTNNCFL VKQFGRGNAK VQFSKEKNNL
101: CNLNSYKHSG LANKKTVTIQ PADKEQGVVL ATTKTKKQNK PKVSVNKSIL KKEFPRMSKA VANQVVDNYY RPDLKKFALA RLSVISKSIR VAKSGAKQRN
201: RQA
101: CNLNSYKHSG LANKKTVTIQ PADKEQGVVL ATTKTKKQNK PKVSVNKSIL KKEFPRMSKA VANQVVDNYY RPDLKKFALA RLSVISKSIR VAKSGAKQRN
201: RQA
001: MATVPGQLIW EIVKNNNCFL VKQFGRGNSK VQFSKETNNL TNVHSYKHSG LANKKTVTIQ AADKDQAVVL ATTKTKKQNK PKLSVNKSIL KKEFPRMSKA
101: VANQVVDNYY RPDLKKAALA RLSAISKGLR VAKSGAKQRN RQA
101: VANQVVDNYY RPDLKKAALA RLSAISKGLR VAKSGAKQRN RQA
Arabidopsis Description
RPL28A60S ribosomal protein L28-1 [Source:UniProtKB/Swiss-Prot;Acc:O82204]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.