CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
extracellular 1
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH09991	Soybean	cytosol, endoplasmic reticulum	77.14	36.0
KRH23342	Soybean	endoplasmic reticulum	75.71	35.33
KRH44206	Soybean	nucleus	71.43	33.33
KRH47170	Soybean	endoplasmic reticulum	71.43	33.33
PGSC0003DMT400012339	Potato	cytosol	65.71	32.17
Solyc03g121330.2.1	Tomato	nucleus	64.29	31.47
TraesCS7B01G281500.1	Wheat	cytosol	50.0	30.97
TraesCS5D01G549700.1	Wheat	cytosol	45.71	30.77
VIT_04s0008g00790.t01	Wine grape	cytosol	62.86	30.56
TraesCS3A01G379600.1	Wheat	cytosol	47.14	30.56
PGSC0003DMT400006681	Potato	extracellular	61.43	30.07
TraesCS2D01G587700.1	Wheat	cytosol, plastid	45.71	29.91
TraesCS7B01G324000.1	Wheat	plastid	44.29	29.81
TraesCS1A01G215000.1	Wheat	cytosol	45.71	29.63
PGSC0003DMT400016607	Potato	cytosol	60.0	29.37
Bra039014.1-P	Field mustard	cytosol	60.0	29.37
CDY35881	Canola	cytosol	60.0	29.37
Bra011106.1-P	Field mustard	cytosol	60.0	29.37
Os01t0706500-00	Rice	plastid	60.0	28.97
VIT_09s0002g02560.t01	Wine grape	cytosol	61.43	28.86
AT4G29410.1	Thale cress	cytosol	58.57	28.67
CDX82715	Canola	cytosol	58.57	28.67
Bra036710.1-P	Field mustard	cytosol	58.57	28.67
Os05t0541900-01	Rice	cytosol, golgi, nucleus, plasma membrane, plastid	54.29	28.57
GSMUA_Achr1P05120_001	Banana	cytosol	60.0	28.38
TraesCS3B01G505000.1	Wheat	golgi	45.71	28.32
CDX81940	Canola	cytosol	57.14	27.97
CDY21652	Canola	cytosol	57.14	27.97
Bra031093.1-P	Field mustard	cytosol	57.14	27.97
Zm00001d009417_P006	Maize	cytosol	58.57	27.89
CDX91669	Canola	mitochondrion	25.71	27.69
EES01347	Sorghum	cytosol	57.14	27.59
AT2G19730.2	Thale cress	cytosol	55.71	27.27
CDY30215	Canola	cytosol	55.71	27.27
CDY14213	Canola	cytosol	55.71	27.27
Bra024145.1-P	Field mustard	cytosol	55.71	27.27
Bra010329.1-P	Field mustard	cytosol	55.71	27.27
CDY62032	Canola	cytosol	55.71	27.27
KXG22440	Sorghum	cytosol	55.71	26.71
TraesCS3A01G252700.1	Wheat	cytosol, golgi	52.86	25.87
TraesCS3B01G284300.1	Wheat	cytosol	52.86	25.87
TraesCS3D01G253300.1	Wheat	cytosol	52.86	25.87
HORVU3Hr1G066430.1	Barley	cytosol	52.86	25.87
CDY06809	Canola	extracellular	60.0	24.71
CDY43499	Canola	mitochondrion	60.0	24.28
TraesCS1B01G380800.1	Wheat	golgi	50.0	23.81
TraesCS1D01G368700.1	Wheat	nucleus	50.0	23.81
HORVU1Hr1G079370.1	Barley	cytosol, peroxisome, plastid	50.0	23.81
CDY03348	Canola	plastid	58.57	23.43
GSMUA_Achr5P09610_001	Banana	plasma membrane	60.0	22.83
Bra001548.1-P	Field mustard	nucleus	38.57	22.69
GSMUA_Achr6P33480_001	Banana	nucleus	58.57	20.71
Zm00001d038865_P003	Maize	cytosol, mitochondrion, nucleus, plastid	55.71	20.63
TraesCS5A01G102300.1	Wheat	cytosol	51.43	20.57
CDY48720	Canola	cytosol	58.57	20.2
TraesCS3D01G497400.1	Wheat	cytosol	50.0	20.11
TraesCS6D01G263800.1	Wheat	cytosol	48.57	19.54
TraesCS1A01G363700.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	50.0	17.77
GSMUA_Achr1P28120_001	Banana	mitochondrion	58.57	17.67
CDY47764	Canola	cytosol	45.71	16.33
Solyc06g062500.2.1	Tomato	endoplasmic reticulum, plastid	27.14	15.97
Os02t0821200-01	Rice	plastid	12.86	9.78
TraesCS6A01G220700.1	Wheat	cytosol	25.71	8.29
Bra033205.1-P	Field mustard	cytosol	0.0	0.0
Solyc12g044720.1.1	Tomato	nucleus	0.0	0.0
CDY41134	Canola	cytosol	0.0	0.0

Protein Annotations

MapMan:17.1.2.1.29	Gene3D:3.30.390.110	EMBL:ACUP02005212	EnsemblPlantsGene:GLYMA_08G270100	GO:GO:0003674	GO:GO:0003735
GO:GO:0005198	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829
GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0019538	GO:GO:0022625	UniProt:K7L965	EnsemblPlants:KRH45415	ProteinID:KRH45415	ProteinID:KRH45415.1
InterPro:L28e/Mak16	PFAM:PF01778	PANTHER:PTHR10544	PANTHER:PTHR10544:SF5	InterPro:Ribosomal_L28e	UniParc:UPI000296B7BA

Description

hypothetical protein

Coordinates

chr8:-:34867288..34867681

Molecular Weight (calculated)

7882.7 Da

IEP (calculated)

10.915

GRAVY (calculated)

-0.416

Length

70 amino acids

Sequence
(BLAST)

1: MAIILRACKK LMSILKKNNS FLVKEFGRGT QSVQFSKEPK NLYNLNTFKY SGLANKKTVT VQPTGKDQSV

Best Arabidopsis Sequence Match ( AT4G29410.2 )
(BLAST)

001: MATVPGQLIW EIVKRNNCFL VKQFGRGNAK VQFSKESNNL VNINSYKHSG LANKKTVTIQ AAGKDQGVVL GTTKTKRQNK PKLSVNKSIL KKEFSRMSKV
101: VANQVVDNYY RPDLKKAALA RLSAISKGLR VAKSGPKRRN RQA

Arabidopsis Description

RPL28C60S ribosomal protein L28-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0E2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.