Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 4
- cytosol 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_08s0007g04380.t01 | Wine grape | cytosol | 53.37 | 51.26 |
| KRH67800 | Soybean | cytosol | 53.04 | 51.11 |
| Solyc10g085750.1.1 | Tomato | nucleus | 52.05 | 50.96 |
| PGSC0003DMT400021673 | Potato | cytosol | 52.22 | 50.64 |
| KRG96088 | Soybean | cytosol | 52.87 | 50.63 |
| KRH32613 | Soybean | cytosol | 40.56 | 50.51 |
| KRH19986 | Soybean | cytosol | 40.39 | 49.7 |
| PGSC0003DMT400033802 | Potato | cytosol | 47.45 | 47.53 |
| Solyc09g008620.1.1 | Tomato | cytosol | 46.96 | 47.27 |
| AT4G34110.1 | Thale cress | cytosol | 40.39 | 39.11 |
| GSMUA_Achr9P10860_001 | Banana | cytosol | 45.81 | 39.02 |
| Os03t0278500-01 | Rice | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 41.05 | 38.64 |
| HORVU4Hr1G059070.1 | Barley | cytosol | 40.39 | 37.61 |
| AT2G23350.1 | Thale cress | nucleus | 40.89 | 37.61 |
| TraesCS4A01G099500.1 | Wheat | cytosol | 40.23 | 37.58 |
| TraesCS4B01G204800.1 | Wheat | cytosol | 40.07 | 37.48 |
| AT1G34140.1 | Thale cress | nucleus | 24.79 | 37.1 |
| TraesCS4D01G205700.1 | Wheat | cytosol | 39.41 | 36.75 |
| AT1G49760.1 | Thale cress | cytosol | 39.57 | 35.92 |
| KXG40160 | Sorghum | nucleus | 41.05 | 34.67 |
| Zm00001d047790_P001 | Maize | plastid | 41.38 | 34.29 |
| AT1G22760.1 | Thale cress | nucleus, plastid | 36.12 | 33.33 |
| AT3G16380.1 | Thale cress | nucleus | 28.74 | 32.59 |
| AT1G71770.1 | Thale cress | cytosol, plastid | 36.29 | 32.4 |
| AT5G19350.1 | Thale cress | cytosol | 15.27 | 21.88 |
| AT2G18510.1 | Thale cress | nucleus | 12.97 | 21.76 |
| AT5G54900.1 | Thale cress | nucleus | 13.63 | 21.45 |
| AT4G27000.1 | Thale cress | nucleus | 14.29 | 20.96 |
| AT3G14100.1 | Thale cress | nucleus | 14.45 | 20.61 |
| AT1G17370.1 | Thale cress | mitochondrion, nucleus | 14.12 | 20.53 |
| AT1G47490.1 | Thale cress | nucleus | 14.29 | 20.14 |
| AT1G11650.2 | Thale cress | nucleus | 13.3 | 20.0 |
| AT1G54080.2 | Thale cress | nucleus | 14.12 | 20.0 |
| AT1G47500.1 | Thale cress | nucleus | 13.63 | 19.12 |
| AT3G19130.1 | Thale cress | nucleus | 12.97 | 18.16 |
| AT1G49600.3 | Thale cress | nucleus | 12.97 | 17.56 |
Protein Annotations
| Gene3D:1.10.1900.10 | MapMan:17.4.2.5 | Gene3D:3.30.70.330 | EntrezGene:818238 | ProteinID:AAD20142.1 | ProteinID:AEC09279.1 |
| ArrayExpress:AT2G36660 | EnsemblPlantsGene:AT2G36660 | RefSeq:AT2G36660 | TAIR:AT2G36660 | RefSeq:AT2G36660-TAIR-G | EnsemblPlants:AT2G36660.1 |
| TAIR:AT2G36660.1 | Unigene:At.50119 | EMBL:BX819570 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003723 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005737 | GO:GO:0006412 | GO:GO:0006417 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0019538 | InterPro:IPR000504 | InterPro:IPR002004 | InterPro:IPR012677 | RefSeq:NP_181204.1 |
| InterPro:Nucleotide-bd_a/b_plait_sf | Symbol:PAB7 | InterPro:PABP-dom | InterPro:PABP_1234 | InterPro:PABP_HYD | PFAM:PF00076 |
| PFAM:PF00658 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009052 | PO:PO:0020100 | PO:PO:0025022 | PO:PO:0025195 |
| PO:PO:0025281 | PFscan:PS50102 | PFscan:PS51309 | PANTHER:PTHR24012 | PANTHER:PTHR24012:SF455 | UniProt:Q9ZQA8 |
| InterPro:RBD_domain_sf | InterPro:RRM_dom | InterPro:RRM_dom_euk | SMART:SM00360 | SMART:SM00361 | SMART:SM00517 |
| SUPFAM:SSF54928 | SUPFAM:SSF63570 | TIGRFAMs:TIGR01628 | UniParc:UPI00001311C1 | SEG:seg | : |
Description
PAB7Polyadenylate-binding protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZQA8]
Coordinates
chr2:-:15361321..15364398
Molecular Weight (calculated)
67921.3 Da
IEP (calculated)
9.538
GRAVY (calculated)
-0.454
Length
609 amino acids
Sequence
(BLAST)
(BLAST)
001: MATVHAALHA ADASSSGSSS PVTASLYVGD LHPSVTEGIL YDAFAEFKSL TSVRLCKDAS SGRSLCYGYA NFLSRQDANL AIEKKNNSLL NGKMIRVMWS
101: VRAPDARRNG VGNVFVKNLP ESVTNAVLQD MFKKFGNIVS CKVATLEDGK SRGYGFVQFE QEDAAHAAIQ TLNSTIVADK EIYVGKFMKK TDRVKPEEKY
201: TNLYMKNLDA DVSEDLLREK FAEFGKIVSL AIAKDENRLC RGYAFVNFDN PEDARRAAET VNGTKFGSKC LYVGRAQKKA EREQLLREQF KEKHEEQKMI
301: AKVSNIYVKN VNVAVTEEEL RKHFSQCGTI TSTKLMCDEK GKSKGFGFVC FSTPEEAIDA VKTFHGQMFH GKPLYVAIAQ KKEDRKMQLQ VQFGNRVEAR
401: KSSSSASVNP GTYAPLYYTN THPGMVYQSY PLMWKSANMI GSSYPNSEAV TYPPMVANAP SKNRQNRIGK LDRNAVSYVP NVYQSTQMLP LSRDFSKQQH
501: SRTYGRGKEM KKSIQQRQSE TVGMEMQLLG ELLHPLVEKL EPQLANKITG MLLEMDKSEL LLLLKSPEDL AVRVDEAFEV LKSSKTNLTA PNTHRSDYLA
601: SGIAGVSIK
101: VRAPDARRNG VGNVFVKNLP ESVTNAVLQD MFKKFGNIVS CKVATLEDGK SRGYGFVQFE QEDAAHAAIQ TLNSTIVADK EIYVGKFMKK TDRVKPEEKY
201: TNLYMKNLDA DVSEDLLREK FAEFGKIVSL AIAKDENRLC RGYAFVNFDN PEDARRAAET VNGTKFGSKC LYVGRAQKKA EREQLLREQF KEKHEEQKMI
301: AKVSNIYVKN VNVAVTEEEL RKHFSQCGTI TSTKLMCDEK GKSKGFGFVC FSTPEEAIDA VKTFHGQMFH GKPLYVAIAQ KKEDRKMQLQ VQFGNRVEAR
401: KSSSSASVNP GTYAPLYYTN THPGMVYQSY PLMWKSANMI GSSYPNSEAV TYPPMVANAP SKNRQNRIGK LDRNAVSYVP NVYQSTQMLP LSRDFSKQQH
501: SRTYGRGKEM KKSIQQRQSE TVGMEMQLLG ELLHPLVEKL EPQLANKITG MLLEMDKSEL LLLLKSPEDL AVRVDEAFEV LKSSKTNLTA PNTHRSDYLA
601: SGIAGVSIK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.