Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- plastid 1
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os11t0143500-01 | Rice | mitochondrion | 63.55 | 47.86 |
| TraesCS5D01G140400.2 | Wheat | mitochondrion | 63.55 | 47.77 |
| Os12t0139600-01 | Rice | mitochondrion | 63.33 | 47.68 |
| TraesCS5B01G132600.1 | Wheat | plastid | 63.33 | 47.6 |
| HORVU5Hr1G043060.2 | Barley | mitochondrion | 63.1 | 47.43 |
| KRH71746 | Soybean | mitochondrion | 63.1 | 47.43 |
| KXG27706 | Sorghum | mitochondrion | 63.1 | 47.35 |
| VIT_08s0007g05710.t01 | Wine grape | mitochondrion | 64.46 | 46.47 |
| Solyc10g079470.2.1 | Tomato | nucleus | 62.19 | 46.43 |
| Bra018100.1-P | Field mustard | mitochondrion | 62.41 | 45.59 |
| CDY36916 | Canola | mitochondrion | 62.41 | 45.59 |
| PGSC0003DMT400020997 | Potato | mitochondrion | 60.82 | 45.33 |
| TraesCS5A01G132300.2 | Wheat | mitochondrion | 63.33 | 45.13 |
| CDY24145 | Canola | mitochondrion | 61.5 | 45.0 |
| AT3G47930.1 | Thale cress | mitochondrion | 62.19 | 44.75 |
| KRH33172 | Soybean | mitochondrion | 55.13 | 41.51 |
| Zm00001d004956_P001 | Maize | mitochondrion | 64.01 | 31.08 |
Protein Annotations
| KEGG:00053+1.3.2.3 | MapMan:10.3.1.8 | Gene3D:3.30.465.10 | InterPro:ALO | InterPro:FAD_lactone_oxidase | InterPro:GL_DH |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003885 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009536 | GO:GO:0016020 | GO:GO:0016633 | GO:GO:0016899 | GO:GO:0050660 | GO:GO:0055114 |
| GO:GO:0080049 | EnsemblPlantsGene:GSMUA_Achr6G21390_001 | EnsemblPlants:GSMUA_Achr6P21390_001 | EnsemblPlants:GSMUA_Achr6T21390_001 | UniProt:M0T8Y7 | PFAM:PF04030 |
| PANTHER:PTHR43762 | PANTHER:PTHR43762:SF1 | TIGRFAMs:TIGR01676 | UniParc:UPI0002954CCC | SEG:seg | : |
Description
L-galactono-1,4-lactone dehydrogenase 2, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr6G21390_001]
Coordinates
chr6:+:17512656..17520720
Molecular Weight (calculated)
51172.5 Da
IEP (calculated)
7.066
GRAVY (calculated)
-0.372
Length
439 amino acids
Sequence
(BLAST)
(BLAST)
001: MKGTIVVSKE KNPELFFLAR CGLGGLGVVA EVTIQCVDRH ELVEHTFVSN ASEIRKNHKK WLAENKHIKY LWIPYTDAVV VVRCNPLSKW KNPKFKPKYG
101: KDEALKHIRD LYRDSLRKYR TDVGNDEQDI NQLSFTELRD KLLALDPLNK DHVMKVNQAE AEYWKKSEGY RVGWSDEILG FDCGGQQWVS ETCFPAGTLK
201: MPNMKDLDYI EELKQLIEQE DIPAPAPIEQ RWTACSKSLM SPASSSEEDD IFSWVGIIMY LPTIDARQRK DITEEFFHYR YLTQTRLWDE YSAYEHWAKI
301: EVPKDKEELA ALQERLRKRF PVDTYNKVRG ELDPNRILSN AVLEKLFPWK ETARVSYNWN LLRETNNLLL LWFNNCIGGK ILFHAFHLVN ISGLAIAIAK
401: EFLTFLLEIR SGCFSVQHEM LYLLCVILFT PKCSTSYLP
101: KDEALKHIRD LYRDSLRKYR TDVGNDEQDI NQLSFTELRD KLLALDPLNK DHVMKVNQAE AEYWKKSEGY RVGWSDEILG FDCGGQQWVS ETCFPAGTLK
201: MPNMKDLDYI EELKQLIEQE DIPAPAPIEQ RWTACSKSLM SPASSSEEDD IFSWVGIIMY LPTIDARQRK DITEEFFHYR YLTQTRLWDE YSAYEHWAKI
301: EVPKDKEELA ALQERLRKRF PVDTYNKVRG ELDPNRILSN AVLEKLFPWK ETARVSYNWN LLRETNNLLL LWFNNCIGGK ILFHAFHLVN ISGLAIAIAK
401: EFLTFLLEIR SGCFSVQHEM LYLLCVILFT PKCSTSYLP
001: MLRSLLLRRS VGHSLGTLSP SSSTIRSSFS PHRTLCTTGQ TLTPPPPPPP RPPPPPPATA SEAQFRKYAG YAALAIFSGV ATYFSFPFPE NAKHKKAQIF
101: RYAPLPEDLH TVSNWSGTHE VQTRNFNQPE NLADLEALVK ESHEKKLRIR PVGSGLSPNG IGLSRSGMVN LALMDKVLEV DKEKKRVTVQ AGIRVQQLVD
201: AIKDYGLTLQ NFASIREQQI GGIIQVGAHG TGARLPPIDE QVISMKLVTP AKGTIELSRE KDPELFHLAR CGLGGLGVVA EVTLQCVARH ELVEHTYVSN
301: LQEIKKNHKK LLSANKHVKY LYIPYTDTVV VVTCNPVSKW SGPPKDKPKY TTDEAVQHVR DLYRESIVKY RVQDSGKKSP DSSEPDIQEL SFTELRDKLL
401: ALDPLNDVHV AKVNQAEAEF WKKSEGYRVG WSDEILGFDC GGQQWVSESC FPAGTLANPS MKDLEYIEEL KKLIEKEAIP APAPIEQRWT ARSKSPISPA
501: FSTSEDDIFS WVGIIMYLPT ADPRQRKDIT DEFFHYRHLT QKQLWDQFSA YEHWAKIEIP KDKEELEALQ ARIRKRFPVD AYNKARRELD PNRILSNNMV
601: EKLFPVSTTA
101: RYAPLPEDLH TVSNWSGTHE VQTRNFNQPE NLADLEALVK ESHEKKLRIR PVGSGLSPNG IGLSRSGMVN LALMDKVLEV DKEKKRVTVQ AGIRVQQLVD
201: AIKDYGLTLQ NFASIREQQI GGIIQVGAHG TGARLPPIDE QVISMKLVTP AKGTIELSRE KDPELFHLAR CGLGGLGVVA EVTLQCVARH ELVEHTYVSN
301: LQEIKKNHKK LLSANKHVKY LYIPYTDTVV VVTCNPVSKW SGPPKDKPKY TTDEAVQHVR DLYRESIVKY RVQDSGKKSP DSSEPDIQEL SFTELRDKLL
401: ALDPLNDVHV AKVNQAEAEF WKKSEGYRVG WSDEILGFDC GGQQWVSESC FPAGTLANPS MKDLEYIEEL KKLIEKEAIP APAPIEQRWT ARSKSPISPA
501: FSTSEDDIFS WVGIIMYLPT ADPRQRKDIT DEFFHYRHLT QKQLWDQFSA YEHWAKIEIP KDKEELEALQ ARIRKRFPVD AYNKARRELD PNRILSNNMV
601: EKLFPVSTTA
Arabidopsis Description
GLDHGLDH [Source:UniProtKB/TrEMBL;Acc:A0A178VN92]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.