Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 6
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY36916 | Canola | mitochondrion | 97.17 | 97.0 |
| AT3G47930.1 | Thale cress | mitochondrion | 87.17 | 85.74 |
| KRH71746 | Soybean | mitochondrion | 74.5 | 76.54 |
| VIT_08s0007g05710.t01 | Wine grape | mitochondrion | 76.5 | 75.37 |
| Solyc10g079470.2.1 | Tomato | nucleus | 72.67 | 74.15 |
| PGSC0003DMT400020997 | Potato | mitochondrion | 72.5 | 73.85 |
| TraesCS5B01G132600.1 | Wheat | plastid | 68.33 | 70.21 |
| TraesCS5D01G140400.2 | Wheat | mitochondrion | 68.33 | 70.21 |
| KXG27706 | Sorghum | mitochondrion | 67.83 | 69.57 |
| HORVU5Hr1G043060.2 | Barley | mitochondrion | 67.67 | 69.52 |
| KRH33172 | Soybean | mitochondrion | 67.5 | 69.47 |
| Os11t0143500-01 | Rice | mitochondrion | 66.5 | 68.44 |
| Os12t0139600-01 | Rice | mitochondrion | 66.5 | 68.44 |
| TraesCS5A01G132300.2 | Wheat | mitochondrion | 67.33 | 65.58 |
| GSMUA_Achr6P21390_001 | Banana | cytosol | 45.0 | 61.5 |
| Zm00001d004956_P001 | Maize | mitochondrion | 67.83 | 45.02 |
Protein Annotations
| KEGG:00053+1.3.2.3 | MapMan:10.3.1.8 | Gene3D:3.30.43.10 | Gene3D:3.30.465.10 | GO:A0A078GCD4 | UniProt:A0A078GCD4 |
| InterPro:ALO | EnsemblPlants:CDY24145 | ProteinID:CDY24145 | ProteinID:CDY24145.1 | InterPro:FAD-bd_2 | InterPro:FAD-bd_2-like_sf |
| InterPro:FAD-bd_2_sub1 | InterPro:FAD_lactone_oxidase | InterPro:GL_DH | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0003885 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 |
| GO:GO:0016491 | GO:GO:0016614 | GO:GO:0016633 | GO:GO:0016899 | GO:GO:0050660 | GO:GO:0055114 |
| GO:GO:0071949 | EnsemblPlantsGene:GSBRNA2T00024727001 | InterPro:IPR016166 | InterPro:IPR016167 | InterPro:Oxid_FAD_bind_N | PFAM:PF01565 |
| PFAM:PF04030 | PIRSF:PIRSF000136 | PFscan:PS51387 | PANTHER:PTHR43762 | PANTHER:PTHR43762:SF1 | MetaCyc:PWY-882 |
| SUPFAM:SSF101447 | SUPFAM:SSF56176 | TIGRFAMs:TIGR01676 | UniPathway:UPA00132 | UniParc:UPI0000030219 | SEG:seg |
Description
BnaC03g57320DBnaC03g57320D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GCD4]
Coordinates
chrLK032154:+:178398..181199
Molecular Weight (calculated)
67833.2 Da
IEP (calculated)
8.812
GRAVY (calculated)
-0.533
Length
600 amino acids
Sequence
(BLAST)
(BLAST)
001: MLRSLLLRRS NARSLRPPFP PLRTLCTSGQ TLTPAPPPPP PPPPPISSSA SEKEFRKYAG YAALALFSGA ATYFSFPFPE NAKHKKAQIF RYAPLPEDLH
101: TVSNWSGTHE VQTRNFNQPE TLADLEALVK EAHEKKNRIR PVGSGLSPNG IGLSRSGMVN LALMDKVLEV DKEKKRVRVQ AGIRVQQLVD AIQEYGLTLQ
201: NFASIREQQI GGIIQVGAHG TGARLPPIDE QVIGMKLVTP AKGTIELSKD NDPELFHLAR CGLGGLGVVA EVTLQCVERQ ELLEHTYVST LEEIKKNHKK
301: LLSTNKHVKY LYIPYTDTVV VVTCNPVSKW SGAPKDKPKY TTEEALKHVR DLYRESIVKY RVQDSSKKTP DSREPDINEL SFTELRDKLI ALDPLNDVHV
401: GKVNQAEAEF WKKSEGYRVG WSDEILGFDC GGQQWVSETC FPAGTLAKPS MKDLEYIEQL KELIQKEAIP APSPIEQRWT GRSKSPMSPA FSTAEEDIFS
501: WVGIIMYLPT ADPRQRKDIT DEFFHYRHLT QAKLWDQYSA YEHWAKIEIP KDKEELEALQ ERLRKRFPVD AYNKARRELD PNRILSNNMV EKLFPVSKTA
101: TVSNWSGTHE VQTRNFNQPE TLADLEALVK EAHEKKNRIR PVGSGLSPNG IGLSRSGMVN LALMDKVLEV DKEKKRVRVQ AGIRVQQLVD AIQEYGLTLQ
201: NFASIREQQI GGIIQVGAHG TGARLPPIDE QVIGMKLVTP AKGTIELSKD NDPELFHLAR CGLGGLGVVA EVTLQCVERQ ELLEHTYVST LEEIKKNHKK
301: LLSTNKHVKY LYIPYTDTVV VVTCNPVSKW SGAPKDKPKY TTEEALKHVR DLYRESIVKY RVQDSSKKTP DSREPDINEL SFTELRDKLI ALDPLNDVHV
401: GKVNQAEAEF WKKSEGYRVG WSDEILGFDC GGQQWVSETC FPAGTLAKPS MKDLEYIEQL KELIQKEAIP APSPIEQRWT GRSKSPMSPA FSTAEEDIFS
501: WVGIIMYLPT ADPRQRKDIT DEFFHYRHLT QAKLWDQYSA YEHWAKIEIP KDKEELEALQ ERLRKRFPVD AYNKARRELD PNRILSNNMV EKLFPVSKTA
001: MLRSLLLRRS VGHSLGTLSP SSSTIRSSFS PHRTLCTTGQ TLTPPPPPPP RPPPPPPATA SEAQFRKYAG YAALAIFSGV ATYFSFPFPE NAKHKKAQIF
101: RYAPLPEDLH TVSNWSGTHE VQTRNFNQPE NLADLEALVK ESHEKKLRIR PVGSGLSPNG IGLSRSGMVN LALMDKVLEV DKEKKRVTVQ AGIRVQQLVD
201: AIKDYGLTLQ NFASIREQQI GGIIQVGAHG TGARLPPIDE QVISMKLVTP AKGTIELSRE KDPELFHLAR CGLGGLGVVA EVTLQCVARH ELVEHTYVSN
301: LQEIKKNHKK LLSANKHVKY LYIPYTDTVV VVTCNPVSKW SGPPKDKPKY TTDEAVQHVR DLYRESIVKY RVQDSGKKSP DSSEPDIQEL SFTELRDKLL
401: ALDPLNDVHV AKVNQAEAEF WKKSEGYRVG WSDEILGFDC GGQQWVSESC FPAGTLANPS MKDLEYIEEL KKLIEKEAIP APAPIEQRWT ARSKSPISPA
501: FSTSEDDIFS WVGIIMYLPT ADPRQRKDIT DEFFHYRHLT QKQLWDQFSA YEHWAKIEIP KDKEELEALQ ARIRKRFPVD AYNKARRELD PNRILSNNMV
601: EKLFPVSTTA
101: RYAPLPEDLH TVSNWSGTHE VQTRNFNQPE NLADLEALVK ESHEKKLRIR PVGSGLSPNG IGLSRSGMVN LALMDKVLEV DKEKKRVTVQ AGIRVQQLVD
201: AIKDYGLTLQ NFASIREQQI GGIIQVGAHG TGARLPPIDE QVISMKLVTP AKGTIELSRE KDPELFHLAR CGLGGLGVVA EVTLQCVARH ELVEHTYVSN
301: LQEIKKNHKK LLSANKHVKY LYIPYTDTVV VVTCNPVSKW SGPPKDKPKY TTDEAVQHVR DLYRESIVKY RVQDSGKKSP DSSEPDIQEL SFTELRDKLL
401: ALDPLNDVHV AKVNQAEAEF WKKSEGYRVG WSDEILGFDC GGQQWVSESC FPAGTLANPS MKDLEYIEEL KKLIEKEAIP APAPIEQRWT ARSKSPISPA
501: FSTSEDDIFS WVGIIMYLPT ADPRQRKDIT DEFFHYRHLT QKQLWDQFSA YEHWAKIEIP KDKEELEALQ ARIRKRFPVD AYNKARRELD PNRILSNNMV
601: EKLFPVSTTA
Arabidopsis Description
GLDHGLDH [Source:UniProtKB/TrEMBL;Acc:A0A178VN92]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.