Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 6
- plastid 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G140400.2 | Wheat | mitochondrion | 92.86 | 97.95 |
| TraesCS5B01G132600.1 | Wheat | plastid | 92.69 | 97.77 |
| HORVU5Hr1G043060.2 | Barley | mitochondrion | 91.88 | 96.92 |
| Os11t0143500-01 | Rice | mitochondrion | 83.77 | 88.51 |
| Os12t0139600-01 | Rice | mitochondrion | 83.6 | 88.34 |
| KXG27706 | Sorghum | mitochondrion | 79.38 | 83.59 |
| KRH71746 | Soybean | mitochondrion | 67.69 | 71.4 |
| VIT_08s0007g05710.t01 | Wine grape | mitochondrion | 68.34 | 69.13 |
| Solyc10g079470.2.1 | Tomato | nucleus | 65.75 | 68.88 |
| PGSC0003DMT400020997 | Potato | mitochondrion | 65.1 | 68.08 |
| Bra018100.1-P | Field mustard | mitochondrion | 65.91 | 67.55 |
| CDY36916 | Canola | mitochondrion | 65.91 | 67.55 |
| AT3G47930.1 | Thale cress | mitochondrion | 66.72 | 67.38 |
| CDY24145 | Canola | mitochondrion | 65.58 | 67.33 |
| KRH33172 | Soybean | mitochondrion | 62.5 | 66.04 |
| GSMUA_Achr6P21390_001 | Banana | cytosol | 45.13 | 63.33 |
| Zm00001d004956_P001 | Maize | mitochondrion | 81.01 | 55.2 |
Protein Annotations
| KEGG:00053+1.3.2.3 | MapMan:10.3.1.8 | Gene3D:3.30.43.10 | Gene3D:3.30.465.10 | InterPro:ALO | InterPro:FAD-bd_2 |
| InterPro:FAD-bd_2-like_sf | InterPro:FAD-bd_2_sub1 | InterPro:FAD_lactone_oxidase | InterPro:GL_DH | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0003885 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005739 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009536 | GO:GO:0016020 |
| GO:GO:0016491 | GO:GO:0016614 | GO:GO:0016633 | GO:GO:0016899 | GO:GO:0050660 | GO:GO:0055114 |
| GO:GO:0080049 | InterPro:IPR016166 | InterPro:IPR016167 | InterPro:Oxid_FAD_bind_N | PFAM:PF01565 | PFAM:PF04030 |
| PIRSF:PIRSF000136 | PFscan:PS51387 | PANTHER:PTHR43762 | PANTHER:PTHR43762:SF1 | SUPFAM:SSF56176 | TIGRFAMs:TIGR01676 |
| EnsemblPlantsGene:TraesCS5A01G132300 | EnsemblPlants:TraesCS5A01G132300.2 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr5A:-:298803663..298809245
Molecular Weight (calculated)
69682.5 Da
IEP (calculated)
8.300
GRAVY (calculated)
-0.399
Length
616 amino acids
Sequence
(BLAST)
(BLAST)
001: MRHLLLSRLL RRASSPSQPH HNLQLIRALS SSSPLPASDT DLRKYAGYAL LVLGCGAATY YSFPFPPDAL HKKAVPFKYA PLPDDLHTVS NWSGTHEVHT
101: RVLLQPDSIP ALEDALATAH RERRRLRPLG SGLSPNGLGL SRAGMVNLAL MDKVLDVDVK KKTVTVQAGI RVAELVDALS KHGLTLQNFA SIREQQVGGI
201: IQVGAHGTGA RLPPIDEQVI SMKLVTPAKG TIELSREKNP DLFYLARCGL GGLGVVAEVT LQCVERHQLV EHTFVSNADE IKKNHQNWLS ENKHIKYLWI
301: PYTDTVVVVQ CNPPSRWKTP KLASKYVKDE ALQHVRDLYR ESLKKYSLRL CCGSYRKAWG AVMFVGRVAY AISYTRSVRT EADSKDPAID QLSFTELRDQ
401: LLALDPLDKD HVIRINKAEA EYWKKSEGYR MCWSDEILGF DCGGQQWVSE TCFPTGTLAK PNMKDLYYME ELLQLIEEED IPAPAPIEQR WTAHSRSPMS
501: PASSSEEDDI FSWVGIIMYL PTSDPRQRKD ITEEFFNYRS LTQTSLWDDY SAYEHWAKIE VPKDKDELAQ LQARLRKRFP VDAYNKARME LDPNKVLSSA
601: KLEKFFPGMQ TVQHAR
101: RVLLQPDSIP ALEDALATAH RERRRLRPLG SGLSPNGLGL SRAGMVNLAL MDKVLDVDVK KKTVTVQAGI RVAELVDALS KHGLTLQNFA SIREQQVGGI
201: IQVGAHGTGA RLPPIDEQVI SMKLVTPAKG TIELSREKNP DLFYLARCGL GGLGVVAEVT LQCVERHQLV EHTFVSNADE IKKNHQNWLS ENKHIKYLWI
301: PYTDTVVVVQ CNPPSRWKTP KLASKYVKDE ALQHVRDLYR ESLKKYSLRL CCGSYRKAWG AVMFVGRVAY AISYTRSVRT EADSKDPAID QLSFTELRDQ
401: LLALDPLDKD HVIRINKAEA EYWKKSEGYR MCWSDEILGF DCGGQQWVSE TCFPTGTLAK PNMKDLYYME ELLQLIEEED IPAPAPIEQR WTAHSRSPMS
501: PASSSEEDDI FSWVGIIMYL PTSDPRQRKD ITEEFFNYRS LTQTSLWDDY SAYEHWAKIE VPKDKDELAQ LQARLRKRFP VDAYNKARME LDPNKVLSSA
601: KLEKFFPGMQ TVQHAR
001: MLRSLLLRRS VGHSLGTLSP SSSTIRSSFS PHRTLCTTGQ TLTPPPPPPP RPPPPPPATA SEAQFRKYAG YAALAIFSGV ATYFSFPFPE NAKHKKAQIF
101: RYAPLPEDLH TVSNWSGTHE VQTRNFNQPE NLADLEALVK ESHEKKLRIR PVGSGLSPNG IGLSRSGMVN LALMDKVLEV DKEKKRVTVQ AGIRVQQLVD
201: AIKDYGLTLQ NFASIREQQI GGIIQVGAHG TGARLPPIDE QVISMKLVTP AKGTIELSRE KDPELFHLAR CGLGGLGVVA EVTLQCVARH ELVEHTYVSN
301: LQEIKKNHKK LLSANKHVKY LYIPYTDTVV VVTCNPVSKW SGPPKDKPKY TTDEAVQHVR DLYRESIVKY RVQDSGKKSP DSSEPDIQEL SFTELRDKLL
401: ALDPLNDVHV AKVNQAEAEF WKKSEGYRVG WSDEILGFDC GGQQWVSESC FPAGTLANPS MKDLEYIEEL KKLIEKEAIP APAPIEQRWT ARSKSPISPA
501: FSTSEDDIFS WVGIIMYLPT ADPRQRKDIT DEFFHYRHLT QKQLWDQFSA YEHWAKIEIP KDKEELEALQ ARIRKRFPVD AYNKARRELD PNRILSNNMV
601: EKLFPVSTTA
101: RYAPLPEDLH TVSNWSGTHE VQTRNFNQPE NLADLEALVK ESHEKKLRIR PVGSGLSPNG IGLSRSGMVN LALMDKVLEV DKEKKRVTVQ AGIRVQQLVD
201: AIKDYGLTLQ NFASIREQQI GGIIQVGAHG TGARLPPIDE QVISMKLVTP AKGTIELSRE KDPELFHLAR CGLGGLGVVA EVTLQCVARH ELVEHTYVSN
301: LQEIKKNHKK LLSANKHVKY LYIPYTDTVV VVTCNPVSKW SGPPKDKPKY TTDEAVQHVR DLYRESIVKY RVQDSGKKSP DSSEPDIQEL SFTELRDKLL
401: ALDPLNDVHV AKVNQAEAEF WKKSEGYRVG WSDEILGFDC GGQQWVSESC FPAGTLANPS MKDLEYIEEL KKLIEKEAIP APAPIEQRWT ARSKSPISPA
501: FSTSEDDIFS WVGIIMYLPT ADPRQRKDIT DEFFHYRHLT QKQLWDQFSA YEHWAKIEIP KDKEELEALQ ARIRKRFPVD AYNKARRELD PNRILSNNMV
601: EKLFPVSTTA
Arabidopsis Description
GLDHGLDH [Source:UniProtKB/TrEMBL;Acc:A0A178VN92]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.