Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- mitochondrion 6
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plastid:
22160430
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G140400.2 | Wheat | mitochondrion | 98.8 | 98.8 |
| HORVU5Hr1G043060.2 | Barley | mitochondrion | 97.77 | 97.77 |
| TraesCS5A01G132300.2 | Wheat | mitochondrion | 97.77 | 92.69 |
| Os11t0143500-01 | Rice | mitochondrion | 89.04 | 89.19 |
| Os12t0139600-01 | Rice | mitochondrion | 88.87 | 89.02 |
| KXG27706 | Sorghum | mitochondrion | 84.59 | 84.44 |
| KRH71746 | Soybean | mitochondrion | 72.09 | 72.09 |
| VIT_08s0007g05710.t01 | Wine grape | mitochondrion | 72.6 | 69.62 |
| Solyc10g079470.2.1 | Tomato | nucleus | 70.03 | 69.56 |
| PGSC0003DMT400020997 | Potato | mitochondrion | 69.35 | 68.76 |
| Bra018100.1-P | Field mustard | mitochondrion | 70.55 | 68.55 |
| CDY36916 | Canola | mitochondrion | 70.55 | 68.55 |
| CDY24145 | Canola | mitochondrion | 70.21 | 68.33 |
| AT3G47930.1 | Thale cress | mitochondrion | 70.72 | 67.7 |
| KRH33172 | Soybean | mitochondrion | 66.61 | 66.72 |
| GSMUA_Achr6P21390_001 | Banana | cytosol | 47.6 | 63.33 |
| Zm00001d004956_P001 | Maize | mitochondrion | 86.3 | 55.75 |
Protein Annotations
| KEGG:00053+1.3.2.3 | MapMan:10.3.1.8 | Gene3D:3.30.43.10 | Gene3D:3.30.465.10 | InterPro:ALO | InterPro:FAD-bd_2 |
| InterPro:FAD-bd_2-like_sf | InterPro:FAD-bd_2_sub1 | InterPro:FAD_lactone_oxidase | InterPro:GL_DH | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0003885 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005739 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009536 | GO:GO:0016020 |
| GO:GO:0016491 | GO:GO:0016614 | GO:GO:0016633 | GO:GO:0016899 | GO:GO:0050660 | GO:GO:0055114 |
| GO:GO:0080049 | InterPro:IPR016166 | InterPro:IPR016167 | InterPro:Oxid_FAD_bind_N | PFAM:PF01565 | PFAM:PF04030 |
| PIRSF:PIRSF000136 | PFscan:PS51387 | PANTHER:PTHR43762 | PANTHER:PTHR43762:SF1 | SUPFAM:SSF56176 | TIGRFAMs:TIGR01676 |
| EnsemblPlantsGene:TraesCS5B01G132600 | EnsemblPlants:TraesCS5B01G132600.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr5B:+:247251434..247257118
Molecular Weight (calculated)
66120.1 Da
IEP (calculated)
7.695
GRAVY (calculated)
-0.457
Length
584 amino acids
Sequence
(BLAST)
(BLAST)
001: MRHLLLSRLL RRASSPSQPH HNLQLIRAFS SSSPLPASDT DLRKYAGYAL LVLGCGAATY YSFPFPPDAL HKKAVPFKYA PLPDDLHTVS NWSGTHEVHT
101: RVLLQPDSIP ALEDALATAH RERRRLRPLG SGLSPNGLGL SRAGMVNLAL MDKVLDVDVK KKTVTVQAGI RVAELVDALR EHGLTLQNFA SIREQQVGGI
201: IQVGAHGTGA RLPPIDEQVI SMKLVTPAKG TIELSTEKDP DLFYLARCGL GGLGVVAEVT LQCVERHQLV EHTFVSNADE IKKNHQKWLS ENKHIKYLWI
301: PYTDTVVVVQ CNPPSRWKTP KLASKYGKDE ALQYVRDLYR ESLKKYRTEA DSKDPAIDQL SFTELRDQLI ALDPLDKDHV IRINKAEAEY WKKSEGYRMG
401: WSDEILGFDC GGQQWVSETC FPTGTLAKPN MKDLYYMEEL LQLIEKEDIP APAPIEQRWT ARSRSPMSPA SSSEEDDIFS WVGIIMYLPT SDPRQRKDIT
501: EEFFNYRSLT QTSLWDDYSA YEHWAKIEVP KDKDELAQLQ ARLRKRFPVD AYNKARMELD PNKVLSSAKL EKFFPGMQTV QHAK
101: RVLLQPDSIP ALEDALATAH RERRRLRPLG SGLSPNGLGL SRAGMVNLAL MDKVLDVDVK KKTVTVQAGI RVAELVDALR EHGLTLQNFA SIREQQVGGI
201: IQVGAHGTGA RLPPIDEQVI SMKLVTPAKG TIELSTEKDP DLFYLARCGL GGLGVVAEVT LQCVERHQLV EHTFVSNADE IKKNHQKWLS ENKHIKYLWI
301: PYTDTVVVVQ CNPPSRWKTP KLASKYGKDE ALQYVRDLYR ESLKKYRTEA DSKDPAIDQL SFTELRDQLI ALDPLDKDHV IRINKAEAEY WKKSEGYRMG
401: WSDEILGFDC GGQQWVSETC FPTGTLAKPN MKDLYYMEEL LQLIEKEDIP APAPIEQRWT ARSRSPMSPA SSSEEDDIFS WVGIIMYLPT SDPRQRKDIT
501: EEFFNYRSLT QTSLWDDYSA YEHWAKIEVP KDKDELAQLQ ARLRKRFPVD AYNKARMELD PNKVLSSAKL EKFFPGMQTV QHAK
001: MLRSLLLRRS VGHSLGTLSP SSSTIRSSFS PHRTLCTTGQ TLTPPPPPPP RPPPPPPATA SEAQFRKYAG YAALAIFSGV ATYFSFPFPE NAKHKKAQIF
101: RYAPLPEDLH TVSNWSGTHE VQTRNFNQPE NLADLEALVK ESHEKKLRIR PVGSGLSPNG IGLSRSGMVN LALMDKVLEV DKEKKRVTVQ AGIRVQQLVD
201: AIKDYGLTLQ NFASIREQQI GGIIQVGAHG TGARLPPIDE QVISMKLVTP AKGTIELSRE KDPELFHLAR CGLGGLGVVA EVTLQCVARH ELVEHTYVSN
301: LQEIKKNHKK LLSANKHVKY LYIPYTDTVV VVTCNPVSKW SGPPKDKPKY TTDEAVQHVR DLYRESIVKY RVQDSGKKSP DSSEPDIQEL SFTELRDKLL
401: ALDPLNDVHV AKVNQAEAEF WKKSEGYRVG WSDEILGFDC GGQQWVSESC FPAGTLANPS MKDLEYIEEL KKLIEKEAIP APAPIEQRWT ARSKSPISPA
501: FSTSEDDIFS WVGIIMYLPT ADPRQRKDIT DEFFHYRHLT QKQLWDQFSA YEHWAKIEIP KDKEELEALQ ARIRKRFPVD AYNKARRELD PNRILSNNMV
601: EKLFPVSTTA
101: RYAPLPEDLH TVSNWSGTHE VQTRNFNQPE NLADLEALVK ESHEKKLRIR PVGSGLSPNG IGLSRSGMVN LALMDKVLEV DKEKKRVTVQ AGIRVQQLVD
201: AIKDYGLTLQ NFASIREQQI GGIIQVGAHG TGARLPPIDE QVISMKLVTP AKGTIELSRE KDPELFHLAR CGLGGLGVVA EVTLQCVARH ELVEHTYVSN
301: LQEIKKNHKK LLSANKHVKY LYIPYTDTVV VVTCNPVSKW SGPPKDKPKY TTDEAVQHVR DLYRESIVKY RVQDSGKKSP DSSEPDIQEL SFTELRDKLL
401: ALDPLNDVHV AKVNQAEAEF WKKSEGYRVG WSDEILGFDC GGQQWVSESC FPAGTLANPS MKDLEYIEEL KKLIEKEAIP APAPIEQRWT ARSKSPISPA
501: FSTSEDDIFS WVGIIMYLPT ADPRQRKDIT DEFFHYRHLT QKQLWDQFSA YEHWAKIEIP KDKEELEALQ ARIRKRFPVD AYNKARRELD PNRILSNNMV
601: EKLFPVSTTA
Arabidopsis Description
GLDHGLDH [Source:UniProtKB/TrEMBL;Acc:A0A178VN92]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.