Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 2
- mitochondrion 5
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| mitochondrion:
27780359
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH71746 | Soybean | mitochondrion | 86.45 | 86.3 |
| VIT_08s0007g05710.t01 | Wine grape | mitochondrion | 72.9 | 69.79 |
| Bra018100.1-P | Field mustard | mitochondrion | 69.98 | 67.89 |
| CDY36916 | Canola | mitochondrion | 69.98 | 67.89 |
| Solyc10g079470.2.1 | Tomato | nucleus | 68.44 | 67.86 |
| PGSC0003DMT400020997 | Potato | mitochondrion | 68.44 | 67.74 |
| CDY24145 | Canola | mitochondrion | 69.47 | 67.5 |
| AT3G47930.1 | Thale cress | mitochondrion | 70.5 | 67.38 |
| TraesCS5B01G132600.1 | Wheat | plastid | 66.72 | 66.61 |
| TraesCS5D01G140400.2 | Wheat | mitochondrion | 66.55 | 66.44 |
| HORVU5Hr1G043060.2 | Barley | mitochondrion | 66.21 | 66.1 |
| Os12t0139600-01 | Rice | mitochondrion | 66.04 | 66.04 |
| KXG27706 | Sorghum | mitochondrion | 65.87 | 65.64 |
| Os11t0143500-01 | Rice | mitochondrion | 65.35 | 65.35 |
| TraesCS5A01G132300.2 | Wheat | mitochondrion | 66.04 | 62.5 |
| GSMUA_Achr6P21390_001 | Banana | cytosol | 41.51 | 55.13 |
| Zm00001d004956_P001 | Maize | mitochondrion | 65.69 | 42.37 |
Protein Annotations
| KEGG:00053+1.3.2.3 | MapMan:10.3.1.8 | Gene3D:3.30.43.10 | Gene3D:3.30.465.10 | UniProt:A0A0R0I2I0 | EMBL:ACUP02006392 |
| InterPro:ALO | InterPro:FAD-bd_2 | InterPro:FAD-bd_2-like_sf | InterPro:FAD-bd_2_sub1 | InterPro:FAD_lactone_oxidase | EnsemblPlantsGene:GLYMA_10G104100 |
| InterPro:GL_DH | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003885 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016491 |
| GO:GO:0016614 | GO:GO:0016633 | GO:GO:0016899 | GO:GO:0050660 | GO:GO:0055114 | GO:GO:0071949 |
| InterPro:IPR016166 | InterPro:IPR016167 | EnsemblPlants:KRH33172 | ProteinID:KRH33172 | ProteinID:KRH33172.1 | InterPro:Oxid_FAD_bind_N |
| PFAM:PF01565 | PFAM:PF04030 | PIRSF:PIRSF000136 | PFscan:PS51387 | PANTHER:PTHR43762 | PANTHER:PTHR43762:SF1 |
| MetaCyc:PWY-882 | SUPFAM:SSF56176 | TIGRFAMs:TIGR01676 | TMHMM:TMhelix | UniParc:UPI0006ED8373 | SEG:seg |
Description
hypothetical protein
Coordinates
chr10:-:22026907..22040539
Molecular Weight (calculated)
65910.2 Da
IEP (calculated)
8.776
GRAVY (calculated)
-0.366
Length
583 amino acids
Sequence
(BLAST)
(BLAST)
001: MLRTLVLKRS LGLHSHFHHL LLRRCSSSAA PNSSADAETR KYAGYAALLL FCGGATYYTF PLPDDAKHKK AQIFRYAPLP EDLHTVSNWS GTHEVQTRNF
101: LQPENAEQLE RALREARSRI RPVGSGLSPN GIGLSRTGMV NLALMDGILD VDKQSKTVRV QAGIRVQQLV DGLKDHGLTL QNFASIREQQ IGGIIQVGAH
201: GTGARLPPID EQVIAMKLVT PAKGTIEISK DKDPELFYLA RCGLGGLGVV AEVTLQCVDR QELVEHTVVS TMNEIKKNHK KLLSENKHVK YLYIPYTDSV
301: VVVRCNPVSK WKGPPKFKPQ YTKDEAIQHV RDLYRESLKK YGAEGSRGKS AEDGEQNIDE LSFTELRDKL IALDPLNKKH IISINKAEAE FWRKSEGYRV
401: GWSDEILGFD CGGQQWVSEA CFPAGKLANP SMKDLEYIEE LKLLIEKEDI PAPAPIEQRW TASSRSSLSP ASSPSGDDIF SWVGIIMYLP TMDGRQRKDI
501: TEEFFHYRHL TQAKLWDRYS AYEHWAKIEV IISIIKNERS NMVFGYDVPI FIFLFFLFLL SKNNICINKV QHGINKPFRT KWD
101: LQPENAEQLE RALREARSRI RPVGSGLSPN GIGLSRTGMV NLALMDGILD VDKQSKTVRV QAGIRVQQLV DGLKDHGLTL QNFASIREQQ IGGIIQVGAH
201: GTGARLPPID EQVIAMKLVT PAKGTIEISK DKDPELFYLA RCGLGGLGVV AEVTLQCVDR QELVEHTVVS TMNEIKKNHK KLLSENKHVK YLYIPYTDSV
301: VVVRCNPVSK WKGPPKFKPQ YTKDEAIQHV RDLYRESLKK YGAEGSRGKS AEDGEQNIDE LSFTELRDKL IALDPLNKKH IISINKAEAE FWRKSEGYRV
401: GWSDEILGFD CGGQQWVSEA CFPAGKLANP SMKDLEYIEE LKLLIEKEDI PAPAPIEQRW TASSRSSLSP ASSPSGDDIF SWVGIIMYLP TMDGRQRKDI
501: TEEFFHYRHL TQAKLWDRYS AYEHWAKIEV IISIIKNERS NMVFGYDVPI FIFLFFLFLL SKNNICINKV QHGINKPFRT KWD
001: MLRSLLLRRS VGHSLGTLSP SSSTIRSSFS PHRTLCTTGQ TLTPPPPPPP RPPPPPPATA SEAQFRKYAG YAALAIFSGV ATYFSFPFPE NAKHKKAQIF
101: RYAPLPEDLH TVSNWSGTHE VQTRNFNQPE NLADLEALVK ESHEKKLRIR PVGSGLSPNG IGLSRSGMVN LALMDKVLEV DKEKKRVTVQ AGIRVQQLVD
201: AIKDYGLTLQ NFASIREQQI GGIIQVGAHG TGARLPPIDE QVISMKLVTP AKGTIELSRE KDPELFHLAR CGLGGLGVVA EVTLQCVARH ELVEHTYVSN
301: LQEIKKNHKK LLSANKHVKY LYIPYTDTVV VVTCNPVSKW SGPPKDKPKY TTDEAVQHVR DLYRESIVKY RVQDSGKKSP DSSEPDIQEL SFTELRDKLL
401: ALDPLNDVHV AKVNQAEAEF WKKSEGYRVG WSDEILGFDC GGQQWVSESC FPAGTLANPS MKDLEYIEEL KKLIEKEAIP APAPIEQRWT ARSKSPISPA
501: FSTSEDDIFS WVGIIMYLPT ADPRQRKDIT DEFFHYRHLT QKQLWDQFSA YEHWAKIEVI VDFLI
101: RYAPLPEDLH TVSNWSGTHE VQTRNFNQPE NLADLEALVK ESHEKKLRIR PVGSGLSPNG IGLSRSGMVN LALMDKVLEV DKEKKRVTVQ AGIRVQQLVD
201: AIKDYGLTLQ NFASIREQQI GGIIQVGAHG TGARLPPIDE QVISMKLVTP AKGTIELSRE KDPELFHLAR CGLGGLGVVA EVTLQCVARH ELVEHTYVSN
301: LQEIKKNHKK LLSANKHVKY LYIPYTDTVV VVTCNPVSKW SGPPKDKPKY TTDEAVQHVR DLYRESIVKY RVQDSGKKSP DSSEPDIQEL SFTELRDKLL
401: ALDPLNDVHV AKVNQAEAEF WKKSEGYRVG WSDEILGFDC GGQQWVSESC FPAGTLANPS MKDLEYIEEL KKLIEKEAIP APAPIEQRWT ARSKSPISPA
501: FSTSEDDIFS WVGIIMYLPT ADPRQRKDIT DEFFHYRHLT QKQLWDQFSA YEHWAKIEVI VDFLI
Arabidopsis Description
GLDHGLDH [Source:UniProtKB/TrEMBL;Acc:A0A178VN92]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.