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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 3
  • cytosol 2
  • mitochondrion 5
PPI

Inferred distinct locusB in Crop

Inferred from Arabidopsis experimental PPI

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr6P08770_001 Banana cytosol, golgi, plastid 20.87 72.73
Os11t0425800-01 Rice mitochondrion 42.61 70.0
GSMUA_Achr6P23390_001 Banana cytosol 80.0 65.71
GSMUA_Achr6P08790_001 Banana cytosol 79.13 65.0
Os03t0755700-00 Rice nucleus 69.57 60.61
CDY19938 Canola mitochondrion 54.78 55.26
VIT_07s0005g06490.t01 Wine grape cytosol 95.65 53.4
VIT_05s0029g00020.t01 Wine grape cytosol, mitochondrion, nucleus, plastid 93.91 52.43
GSMUA_Achr10P... Banana mitochondrion 80.87 51.67
GSMUA_Achr3P17910_001 Banana mitochondrion 80.0 51.11
GSMUA_Achr6P15590_001 Banana mitochondrion 80.0 51.11
PGSC0003DMT400096774 Potato mitochondrion, plastid 88.7 50.75
PGSC0003DMT400019917 Potato mitochondrion 90.43 50.49
PGSC0003DMT400040760 Potato mitochondrion, plastid 90.43 50.49
PGSC0003DMT400076290 Potato cytosol, plastid 89.57 50.0
Solyc05g053670.2.1 Tomato nucleus 89.57 50.0
Solyc12g098330.1.1 Tomato nucleus, unclear 89.57 50.0
AT3G24830.1 Thale cress cytosol 87.83 49.03
Zm00001d013252_P001 Maize plasma membrane 87.83 49.03
CDY39786 Canola cytosol 87.83 49.03
AT4G13170.1 Thale cress cytosol 87.83 49.03
AT5G48760.1 Thale cress cytosol 87.83 49.03
CDY03292 Canola cytosol 87.83 49.03
Bra036669.1-P Field mustard cytosol 87.83 49.03
CDY52083 Canola cytosol 86.96 48.54
Bra013239.1-P Field mustard cytosol 86.96 48.54
Bra015088.1-P Field mustard cytosol 86.96 48.54
Bra020681.1-P Field mustard cytosol 86.96 48.54
Bra036161.1-P Field mustard cytosol 86.96 48.54
CDX77383 Canola cytosol 86.96 48.54
CDX85362 Canola cytosol 86.96 48.54
CDX86281 Canola cytosol 86.96 48.54
KRH36792 Soybean nucleus 86.96 48.54
KRH07489 Soybean nucleus 86.96 48.54
EER93429 Sorghum cytosol 86.96 48.54
EES17613 Sorghum mitochondrion 86.96 48.54
CDY33947 Canola cytosol 86.96 48.54
CDY15113 Canola cytosol 86.96 48.54
CDY05663 Canola cytosol 86.96 48.54
CDY00046 Canola cytosol 86.96 48.54
CDX93039 Canola cytosol 86.96 48.54
KRH11781 Soybean nucleus 86.09 48.06
KRH46742 Soybean nucleus 86.09 48.06
Solyc09g091740.2.1 Tomato nucleus 89.57 47.69
KRH46743 Soybean cytosol 85.22 47.57
TraesCS5A01G392900.1 Wheat cytosol, golgi, nucleus, unclear 85.22 47.57
TraesCS5D01G402800.1 Wheat cytosol 85.22 47.57
TraesCS5B01G397800.1 Wheat cytosol 85.22 47.57
AT3G07110.2 Thale cress cytosol 85.22 47.34
HORVU2Hr1G063880.5 Barley mitochondrion 82.61 46.12
TraesCS2B01G281300.1 Wheat mitochondrion 80.87 45.15
TraesCS2D01G263000.1 Wheat mitochondrion 80.0 44.66
TraesCS2A01G260700.1 Wheat golgi, unclear 80.0 44.66
Zm00001d034059_P006 Maize cytosol 86.96 42.02
GSMUA_Achr3P13700_001 Banana mitochondrion 38.26 40.74
TraesCS5A01G541100.1 Wheat cytosol, mitochondrion 34.78 36.7
HORVU2Hr1G063900.1 Barley cytosol, nucleus 6.96 16.67
Protein Annotations
MapMan:17.1.2.1.14Gene3D:3.90.1180.10ProteinID:CCB43930ProteinID:CCB43930.1UniProt:F6GVE7EMBL:FN594952
GO:GO:0003674GO:GO:0003676GO:GO:0003723GO:GO:0003729GO:GO:0003735GO:GO:0005198
GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005829
GO:GO:0005840GO:GO:0006412GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987
GO:GO:0015934GO:GO:0019538GO:GO:0022625GO:GO:0030529InterPro:IPR036899PFAM:PF00572
PIRSF:PIRSF002181ScanProsite:PS00783PANTHER:PTHR11545PANTHER:PTHR11545:SF3InterPro:Ribosomal_L13InterPro:Ribosomal_L13_CS
InterPro:Ribosomal_L13_euk/arcInterPro:Ribosomal_L13_sfSUPFAM:SSF52161TIGRFAMs:TIGR01077UniParc:UPI000210A60CArrayExpress:VIT_15s0021g00760
EnsemblPlantsGene:VIT_15s0021g00760EnsemblPlants:VIT_15s0021g00760.t01RefSeq:XP_002267951RefSeq:XP_002267951.1SEG:seg:
Description
No Description!
Coordinates
chr15:+:10574193..10574605
Molecular Weight (calculated)
13616.2 Da
IEP (calculated)
11.652
GRAVY (calculated)
-0.670
Length
115 amino acids
Sequence
(BLAST)
001: MKYLRFLRKR MNTKPSHGPI HFRAPSKILW RTIRGMIPHK TKRGAATLAR LKAYEGIPPP YDKMKRMVIP DALKVLRLQA GHKYCLLGRL SLEVGWNHYD
101: TIRELEKKRK ERRLA
Best Arabidopsis Sequence Match ( AT3G24830.1 )
(BLAST)
001: MVSGSGICSK RVVVDARHHM CGRLASIIAK ELLNGQSVVV VRCEEICLSG GLVRQKMKYM RFLRKRMNTK PSHGPIHFRA PSKIFWRTVR GMIPHKTKRG
101: AAALARLKVF EGVPPPYDKV KRMVIPDALK VLRLQAGHKY CLLGRLSSEV GWNHYDTIKE LEVKRKERSQ ALYERKKQLT KLRAKAEKVA EEKLGSQLDV
201: LASIKY
Arabidopsis Description
RPL13AB60S ribosomal protein L13a-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRX8]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.