Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d015123_P001 | Maize | cytosol | 96.78 | 96.17 |
| Os02t0128800-01 | Rice | cytosol | 89.71 | 90.58 |
| TraesCSU01G019700.1 | Wheat | nucleus | 90.03 | 90.03 |
| TraesCS6B01G114800.1 | Wheat | nucleus | 90.03 | 90.03 |
| TraesCS6A01G086800.1 | Wheat | nucleus | 89.71 | 89.71 |
| HORVU6Hr1G016120.2 | Barley | nucleus | 89.07 | 89.07 |
| GSMUA_Achr1P10820_001 | Banana | nucleus, peroxisome, plasma membrane | 65.92 | 84.71 |
| GSMUA_Achr11P... | Banana | nucleus | 72.99 | 76.17 |
| EER97677 | Sorghum | cytosol | 64.31 | 66.23 |
| EER92255 | Sorghum | nucleus | 63.99 | 65.89 |
| EES02178 | Sorghum | cytosol, nucleus, peroxisome | 64.63 | 65.47 |
| KXG19745 | Sorghum | extracellular | 18.65 | 60.42 |
| EES06707 | Sorghum | nucleus | 66.56 | 60.17 |
| EES19270 | Sorghum | cytosol, nucleus, peroxisome | 66.24 | 58.36 |
| KXG22272 | Sorghum | cytosol | 16.08 | 49.02 |
| KXG30435 | Sorghum | cytosol | 16.08 | 49.02 |
| KXG32011 | Sorghum | cytosol | 19.94 | 25.51 |
| KXG32010 | Sorghum | extracellular | 19.61 | 24.9 |
| KXG32008 | Sorghum | cytosol, nucleus, plastid | 20.58 | 24.06 |
| KXG37941 | Sorghum | cytosol | 20.9 | 23.21 |
| KXG37942 | Sorghum | cytosol, nucleus, plastid | 19.61 | 22.93 |
| OQU86439 | Sorghum | cytosol, mitochondrion, plastid | 18.97 | 22.18 |
| KXG32014 | Sorghum | nucleus | 15.11 | 21.36 |
| KXG32085 | Sorghum | nucleus | 14.15 | 19.47 |
| OQU86434 | Sorghum | endoplasmic reticulum, plasma membrane | 19.94 | 19.02 |
| EES00387 | Sorghum | nucleus | 19.29 | 18.81 |
| KXG32009 | Sorghum | nucleus | 17.68 | 18.58 |
| OQU78944 | Sorghum | nucleus | 18.97 | 18.1 |
| OQU86460 | Sorghum | nucleus | 19.29 | 17.96 |
| OQU77422 | Sorghum | cytosol | 16.08 | 17.48 |
| EES02573 | Sorghum | cytosol | 19.61 | 17.48 |
| KXG32019 | Sorghum | nucleus, plastid | 20.9 | 17.47 |
| KXG32028 | Sorghum | plastid | 18.65 | 17.26 |
| EES17728 | Sorghum | cytosol, mitochondrion, nucleus | 17.04 | 16.21 |
| OQU77414 | Sorghum | mitochondrion, nucleus | 18.01 | 15.82 |
| KXG21322 | Sorghum | nucleus | 18.65 | 15.51 |
| EES17731 | Sorghum | nucleus | 15.76 | 14.16 |
| OQU86453 | Sorghum | cytosol | 9.65 | 14.02 |
| OQU77425 | Sorghum | nucleus | 15.76 | 13.03 |
| EES17735 | Sorghum | mitochondrion | 16.08 | 11.14 |
| EES02574 | Sorghum | nucleus | 15.11 | 10.49 |
Protein Annotations
| MapMan:19.2.2.1.5.3.5 | Gene3D:2.60.210.10 | Gene3D:3.30.40.10 | InterPro:7-in-absentia-prot_TRAF-dom | EntrezGene:8055085 | UniProt:C5XTS0 |
| ProteinID:EES04443.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006464 | GO:GO:0006511 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016567 |
| GO:GO:0016740 | GO:GO:0019538 | GO:GO:0046872 | GO:GO:0061630 | InterPro:IPR001841 | InterPro:IPR008974 |
| InterPro:IPR013010 | InterPro:IPR013083 | EnsemblPlants:OQU84285 | ProteinID:OQU84285 | ProteinID:OQU84285.1 | PFAM:PF03145 |
| PFscan:PS50089 | PFscan:PS51081 | PANTHER:PTHR10315 | PANTHER:PTHR10315:SF73 | InterPro:SINA-like | EnsemblPlantsGene:SORBI_3004G027000 |
| SUPFAM:SSF49599 | SUPFAM:SSF57850 | InterPro:TRAF-like | UniParc:UPI0001A85374 | RefSeq:XP_002451467.1 | InterPro:Znf_RING |
| InterPro:Znf_RING/FYVE/PHD | InterPro:Znf_SIAH | : | : | : | : |
Description
hypothetical protein
Coordinates
chr4:+:2156770..2160056
Molecular Weight (calculated)
34746.7 Da
IEP (calculated)
7.092
GRAVY (calculated)
-0.279
Length
311 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPGSSIVTV VPESDCGDDD GLSEALGGIR LDVDSASKPW STSLANVALS SLSGLNDLLE CPVCTNSMRP PILQCPNGHT ICSSCKHRVE NHCPTCRQEL
101: GNIRCLALEK VAEQLQLPCK YQSMGCTEIH PYKNKLKHEE LCRFRPYNCP YAGSECLITG DVPFLVSHLI NDHKVDLHEG CTFNHRYVKP NPYEVENATW
201: MLTVFKCFGQ HFCLHFEAFL LGMAPVYMAF LRFMGEESEA QGFGYSLEVG GGGRKLTWQG TPRSIRDSHR KVRDSFDGLI IHRNMALFFS GGGRQELKLR
301: VTGRIWKEQG Q
101: GNIRCLALEK VAEQLQLPCK YQSMGCTEIH PYKNKLKHEE LCRFRPYNCP YAGSECLITG DVPFLVSHLI NDHKVDLHEG CTFNHRYVKP NPYEVENATW
201: MLTVFKCFGQ HFCLHFEAFL LGMAPVYMAF LRFMGEESEA QGFGYSLEVG GGGRKLTWQG TPRSIRDSHR KVRDSFDGLI IHRNMALFFS GGGRQELKLR
301: VTGRIWKEQG Q
001: MAPGGSALKE ALESNSTGVD YEVKMAKVEA NSKPTKSGSG SIGKFHSSNG VYELLECPVC TNLMYPPIHQ CPNGHTLCSS CKLRVQNTCP TCRYELGNIR
101: CLALEKVAES LEVPCRYQNL GCQDIFPYYS KLKHEQHCRF RSYSCPYAGS ECSVTGDIPT LVDHLKDDHK VDMHDGCTFN HRYVKSNPHE VENATWMLTV
201: FNCFGRQFCL HFEAFQLGMA PVYMAFLRFM GDENEAKKFS YSLEVGAHSR KLTWQGIPRS IRDSHRKVRD SQDGLIIPRN LALYFSGSDK EELKLRVTGR
301: IWKEE
101: CLALEKVAES LEVPCRYQNL GCQDIFPYYS KLKHEQHCRF RSYSCPYAGS ECSVTGDIPT LVDHLKDDHK VDMHDGCTFN HRYVKSNPHE VENATWMLTV
201: FNCFGRQFCL HFEAFQLGMA PVYMAFLRFM GDENEAKKFS YSLEVGAHSR KLTWQGIPRS IRDSHRKVRD SQDGLIIPRN LALYFSGSDK EELKLRVTGR
301: IWKEE
Arabidopsis Description
SINAT1E3 ubiquitin-protein ligase [Source:UniProtKB/TrEMBL;Acc:A0A178VZ75]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.