Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 3
- cytosol 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d040046_P001 | Maize | cytosol, mitochondrion, nucleus | 52.26 | 62.05 |
| TraesCS3A01G101600.1 | Wheat | nucleus | 28.57 | 42.94 |
| TraesCS4A01G369000.1 | Wheat | cytosol | 28.95 | 41.4 |
| KXG32011 | Sorghum | cytosol | 37.22 | 40.74 |
| KXG32010 | Sorghum | extracellular | 36.84 | 40.0 |
| HORVU3Hr1G018640.1 | Barley | cytosol | 30.45 | 38.94 |
| TraesCS5D01G504400.1 | Wheat | cytosol | 29.32 | 38.81 |
| TraesCS3A01G101400.1 | Wheat | cytosol | 28.2 | 35.89 |
| KXG32085 | Sorghum | nucleus | 28.2 | 33.19 |
| HORVU3Hr1G018420.2 | Barley | plastid | 38.35 | 32.18 |
| OQU86434 | Sorghum | endoplasmic reticulum, plasma membrane | 36.84 | 30.06 |
| EES02573 | Sorghum | cytosol | 39.1 | 29.8 |
| KXG32019 | Sorghum | nucleus, plastid | 40.23 | 28.76 |
| KXG32028 | Sorghum | plastid | 26.32 | 20.83 |
| OQU86460 | Sorghum | nucleus | 24.06 | 19.16 |
| OQU84285 | Sorghum | cytosol | 22.18 | 18.97 |
| KXG32008 | Sorghum | cytosol, nucleus, plastid | 18.42 | 18.42 |
| OQU78944 | Sorghum | nucleus | 22.56 | 18.4 |
| KXG37942 | Sorghum | cytosol, nucleus, plastid | 18.05 | 18.05 |
| EER97677 | Sorghum | cytosol | 19.55 | 17.22 |
| EER92255 | Sorghum | nucleus | 19.55 | 17.22 |
| EES06707 | Sorghum | nucleus | 21.8 | 16.86 |
| OQU86453 | Sorghum | cytosol | 13.53 | 16.82 |
| KXG37941 | Sorghum | cytosol | 17.67 | 16.79 |
| EES02178 | Sorghum | cytosol, nucleus, peroxisome | 18.8 | 16.29 |
| KXG32009 | Sorghum | nucleus | 18.05 | 16.22 |
| EES00387 | Sorghum | nucleus | 18.05 | 15.05 |
| OQU77422 | Sorghum | cytosol | 16.17 | 15.04 |
| KXG32014 | Sorghum | nucleus | 12.41 | 15.0 |
| KXG19745 | Sorghum | extracellular | 5.26 | 14.58 |
| EES19270 | Sorghum | cytosol, nucleus, peroxisome | 18.8 | 14.16 |
| EES17728 | Sorghum | cytosol, mitochondrion, nucleus | 17.29 | 14.07 |
| EES17731 | Sorghum | nucleus | 16.92 | 13.01 |
| OQU77414 | Sorghum | mitochondrion, nucleus | 16.92 | 12.71 |
| KXG21322 | Sorghum | nucleus | 16.54 | 11.76 |
| KXG22272 | Sorghum | cytosol | 4.51 | 11.76 |
| KXG30435 | Sorghum | cytosol | 4.51 | 11.76 |
| OQU77425 | Sorghum | nucleus | 16.17 | 11.44 |
| EES17735 | Sorghum | mitochondrion | 18.42 | 10.91 |
| EES02574 | Sorghum | nucleus | 16.54 | 9.82 |
Protein Annotations
| MapMan:35.1 | UniProt:A0A1W0VWC5 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006511 | GO:GO:0007275 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0019538 | InterPro:IPR008974 | EnsemblPlants:OQU86439 |
| ProteinID:OQU86439 | ProteinID:OQU86439.1 | PANTHER:PTHR10315 | PANTHER:PTHR10315:SF71 | InterPro:SINA-like | EnsemblPlantsGene:SORBI_3003G091400 |
| SUPFAM:SSF49599 | InterPro:TRAF-like | UniParc:UPI0009DC8D19 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr3:+:7953606..7954584
Molecular Weight (calculated)
28649.6 Da
IEP (calculated)
8.437
GRAVY (calculated)
-0.222
Length
266 amino acids
Sequence
(BLAST)
(BLAST)
001: MTGKKTMASS AAGTSKKPRK TKKATKAKDV PVVVLEDEED AALTLSVEEK DTLECDICCL PFESQVFMCK NGHSGCANCC LRTSGKCWSC PEPMGIRCRP
101: LEKLLAAATT ACKFRKNGCN KAVRYTEKLR HEETLPARAD HGGPDGFAAI VGGLRGTAVT VHRDAPFRVL LPRDRDDRVF LLLNGRDLLQ GRSLSLLCLG
201: PRPESGVELE YEMEVGGAAA PGELALSASG TVPCARRLEG FQAKGFLFVP DAYWGSSGTV SVRVRV
101: LEKLLAAATT ACKFRKNGCN KAVRYTEKLR HEETLPARAD HGGPDGFAAI VGGLRGTAVT VHRDAPFRVL LPRDRDDRVF LLLNGRDLLQ GRSLSLLCLG
201: PRPESGVELE YEMEVGGAAA PGELALSASG TVPCARRLEG FQAKGFLFVP DAYWGSSGTV SVRVRV
001: MARFSVCGGD DGEGPSNNNH QSRKRQRLPS IDENEEDAET SDAGSSGEED EDETQNQGMR PESEDRGSTS DDSDREVVIE ERRFGKFVNS QSSSSSKDSP
101: LSVTLLDPDV LDCPICCEPL KIPIFQCDNG HLACTLCCTK VRNRCPSCTL PIGYVRCRAM EKVIEASRVS CLNAKYGCKE STSYGNRFSH EQVCVFTPCS
201: CPILDCHYTG YYKDLNNHVR AEHKDDLISF VWNTRLTISL DLNKKTTILQ EENDGHVIVV QVFRALHAVY VSVSCIAPLT PGVGRLSCRL AKITVDSLLK
301: QGFMVKNIQK VTNEHPEDGF MLIPSYLFSG NDNLNLQIWI GHGRIFVHS
101: LSVTLLDPDV LDCPICCEPL KIPIFQCDNG HLACTLCCTK VRNRCPSCTL PIGYVRCRAM EKVIEASRVS CLNAKYGCKE STSYGNRFSH EQVCVFTPCS
201: CPILDCHYTG YYKDLNNHVR AEHKDDLISF VWNTRLTISL DLNKKTTILQ EENDGHVIVV QVFRALHAVY VSVSCIAPLT PGVGRLSCRL AKITVDSLLK
301: QGFMVKNIQK VTNEHPEDGF MLIPSYLFSG NDNLNLQIWI GHGRIFVHS
Arabidopsis Description
E3 ubiquitin-protein ligase SINA-like 10 [Source:UniProtKB/Swiss-Prot;Acc:Q84K34]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.