Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY37172 | Canola | cytosol | 97.27 | 70.86 |
| Bra017511.1-P | Field mustard | nucleus | 71.36 | 51.99 |
| AT5G47050.1 | Thale cress | nucleus | 70.45 | 51.67 |
| Bra024967.1-P | Field mustard | plastid | 55.0 | 48.99 |
| Bra012650.1-P | Field mustard | nucleus | 52.27 | 32.95 |
| KRH77271 | Soybean | plastid | 43.64 | 29.81 |
| Solyc08g077460.2.1 | Tomato | nucleus | 46.82 | 29.6 |
| PGSC0003DMT400004642 | Potato | nucleus | 46.36 | 29.48 |
| KRH28216 | Soybean | nucleus | 42.27 | 28.27 |
| VIT_02s0012g00290.t01 | Wine grape | cytosol, nucleus, plastid | 43.18 | 28.19 |
| Solyc06g061020.2.1 | Tomato | nucleus | 41.82 | 27.79 |
| PGSC0003DMT400068387 | Potato | nucleus | 41.36 | 26.61 |
| KRH04275 | Soybean | nucleus | 42.73 | 26.33 |
| Solyc08g007120.2.1 | Tomato | nucleus | 39.55 | 26.28 |
| KRH57556 | Soybean | nucleus | 40.45 | 25.43 |
| PGSC0003DMT400052841 | Potato | nucleus | 38.64 | 24.36 |
| GSMUA_Achr1P00560_001 | Banana | nucleus | 29.55 | 22.49 |
| GSMUA_Achr2P18250_001 | Banana | nucleus | 33.64 | 22.42 |
| GSMUA_Achr2P12040_001 | Banana | plastid | 26.82 | 21.93 |
| GSMUA_Achr4P30100_001 | Banana | plastid | 30.0 | 21.64 |
| GSMUA_Achr8P14860_001 | Banana | nucleus | 32.73 | 21.36 |
| Os02t0687500-01 | Rice | cytosol, nucleus, plastid | 30.45 | 21.07 |
| TraesCS6D01G243000.1 | Wheat | cytosol | 31.36 | 20.66 |
| TraesCS6B01G289500.1 | Wheat | nucleus | 31.36 | 20.41 |
| Os10t0565500-01 | Rice | nucleus | 32.27 | 20.23 |
| TraesCS6A01G262200.1 | Wheat | nucleus | 30.91 | 20.0 |
| HORVU6Hr1G066640.4 | Barley | nucleus | 30.45 | 19.53 |
| Zm00001d051484_P001 | Maize | nucleus, plastid | 29.55 | 18.41 |
| TraesCS1D01G217800.1 | Wheat | cytosol | 26.82 | 18.38 |
| EES05709 | Sorghum | nucleus | 29.09 | 18.13 |
| Zm00001d047069_P001 | Maize | cytosol | 27.27 | 18.07 |
| Bra040255.1-P | Field mustard | nucleus | 18.64 | 17.9 |
| Zm00001d029988_P001 | Maize | cytosol, mitochondrion, nucleus | 27.27 | 17.86 |
| TraesCS1A01G215300.1 | Wheat | cytosol | 25.91 | 17.59 |
| Zm00001d017649_P001 | Maize | plastid | 26.36 | 17.52 |
| TraesCS1B01G228800.1 | Wheat | cytosol | 25.91 | 17.48 |
| GSMUA_Achr4P21690_001 | Banana | nucleus | 25.45 | 17.28 |
| KXG38894 | Sorghum | cytosol, mitochondrion, nucleus | 27.27 | 17.24 |
| HORVU1Hr1G054930.3 | Barley | cytosol | 25.0 | 16.77 |
| Bra031495.1-P | Field mustard | nucleus | 23.18 | 15.6 |
| Bra011582.1-P | Field mustard | cytosol, nucleus, plastid | 15.45 | 15.38 |
| Bra019910.1-P | Field mustard | nucleus, plastid | 20.91 | 15.13 |
| Bra018428.1-P | Field mustard | nucleus | 22.73 | 14.79 |
| Bra017691.1-P | Field mustard | cytosol, extracellular, nucleus | 15.45 | 14.47 |
| Bra034672.1-P | Field mustard | cytosol | 15.91 | 13.94 |
| Bra014051.1-P | Field mustard | nucleus | 19.55 | 13.83 |
| Bra039354.1-P | Field mustard | cytosol | 17.27 | 11.69 |
| Bra034718.1-P | Field mustard | nucleus | 17.27 | 11.28 |
| Bra013423.1-P | Field mustard | nucleus | 15.0 | 11.15 |
| Bra012532.1-P | Field mustard | nucleus | 15.0 | 10.78 |
| Bra001477.1-P | Field mustard | nucleus | 16.36 | 10.59 |
| Bra039533.1-P | Field mustard | cytosol, nucleus, plastid | 14.09 | 10.47 |
| Bra035092.1-P | Field mustard | nucleus | 14.55 | 10.13 |
| Bra027588.1-P | Field mustard | cytosol, nucleus, plastid | 10.45 | 8.24 |
| Bra028364.1-P | Field mustard | cytosol, nucleus, plastid | 10.45 | 8.16 |
Protein Annotations
| EnsemblPlants:Bra022093.1 | EnsemblPlants:Bra022093.1-P | EnsemblPlantsGene:Bra022093 | InterPro:E3ligase_BOI_like | ncoils:Coil | PANTHER:PTHR42647 |
| PANTHER:PTHR42647:SF13 | PIRSF:PIRSF036836 | UniParc:UPI000254611E | UniProt:M4DZZ6 | MapMan:35.2 | : |
Description
AT5G47050 (E=2e-074) | protein binding / zinc ion binding
Coordinates
chrA02:+:19229196..19230100
Molecular Weight (calculated)
24977.7 Da
IEP (calculated)
10.204
GRAVY (calculated)
-0.692
Length
220 amino acids
Sequence
(BLAST)
(BLAST)
001: MVVQTHDHLS TLLFLNRNGQ EGNAFSPELQ KSQFPSITAG VGSRKRAREV SSVIDLDITA SPMNPTPSTP PQFIGRGQTP NVVSTGLRLS QGQWQNREHR
101: LTTFPMITRY IAGENKRATD ELDMLLQTQE AELRRMLAEN NERHYRELLR TTEESVRRRL REKEAEIVKA TRRYAELEAR AAQMETESRA WQVRAAAREA
201: EATSLQVRLQ PGAVLEKVGL
101: LTTFPMITRY IAGENKRATD ELDMLLQTQE AELRRMLAEN NERHYRELLR TTEESVRRRL REKEAEIVKA TRRYAELEAR AAQMETESRA WQVRAAAREA
201: EATSLQVRLQ PGAVLEKVGL
001: MAVQAHHHPS TLFFLNNGQE GNDQPHKSQF HSINAGVDTR KRAREVSSVI DLDITAAPMN PPPQTPPQVI GRRQNPNVVS TGLRLSREQS QNQEQRFLSF
101: PITGDVAGEI KSQTDELNRF LQIQGEQLKR MLAENSERNY RELLRTTEES VRRRLREKEA EIEKATRRHV ELEARATQIE TEARAWQMRA AAREAEATSL
201: QAQLHQAVVV AHGGGVITTV EPQSGSVDGV DEAEDAESAY VDPDRVEMIG PGCRICRRRS ATVLALPCRH LVMCTECDGS VRICPLCLST KNSSVEVFYS
101: PITGDVAGEI KSQTDELNRF LQIQGEQLKR MLAENSERNY RELLRTTEES VRRRLREKEA EIEKATRRHV ELEARATQIE TEARAWQMRA AAREAEATSL
201: QAQLHQAVVV AHGGGVITTV EPQSGSVDGV DEAEDAESAY VDPDRVEMIG PGCRICRRRS ATVLALPCRH LVMCTECDGS VRICPLCLST KNSSVEVFYS
Arabidopsis Description
SBP (S-ribonuclease binding protein) family protein [Source:UniProtKB/TrEMBL;Acc:Q9FJQ8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.