Factsheet for Os05t0490300-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os04t0128900-01
Os07t0437000-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G78100.1	Os04t0128900-01	AT4G28720.1	21798944
AT1G78100.1	Os07t0437000-01	AT4G28720.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G307800.1	Wheat	cytosol	70.67	89.33
EES19721	Sorghum	cytosol	70.22	89.27
TraesCS1B01G318500.1	Wheat	cytosol	70.44	89.04
TraesCS1D01G307200.1	Wheat	cytosol	70.22	88.76
Zm00001d038537_P001	Maize	cytosol	69.56	88.42
HORVU1Hr1G068570.1	Barley	cytosol	69.11	88.1
HORVU0Hr1G030450.1	Barley	cytosol	68.67	87.54
Zm00001d010640_P001	Maize	cytosol, peroxisome, plastid	67.56	85.88
TraesCS3D01G518800.1	Wheat	cytosol	59.78	84.86
Os01t0812200-01	Rice	cytosol	65.33	83.29
GSMUA_Achr7P21580_001	Banana	cytosol	58.22	74.22
GSMUA_Achr10P...	Banana	cytosol	54.67	69.49
Os03t0321300-01	Rice	cytosol	48.22	56.51
VIT_18s0001g05310.t01	Wine grape	cytosol	30.22	45.33
Os05t0510400-02	Rice	cytosol	38.67	42.23
Os01t0770400-01	Rice	cytosol	36.44	41.41
Bra016384.1-P	Field mustard	cytosol	17.56	39.5
CDY46634	Canola	cytosol	23.33	37.77
AT1G22220.1	Thale cress	cytosol	26.0	37.26
CDX91668	Canola	cytosol	26.22	36.99
Bra012314.1-P	Field mustard	cytosol	26.0	36.79
CDY41488	Canola	cytosol	26.0	36.68
CDY00435	Canola	cytosol	25.78	36.48
PGSC0003DMT400024512	Potato	cytosol	27.56	36.47
Solyc04g072930.1.1	Tomato	cytosol	27.56	36.47
VIT_06s0009g03690.t01	Wine grape	cytosol	27.56	36.26
CDY26850	Canola	cytosol	23.78	35.91
CDX88418	Canola	cytosol	25.56	35.83
CDY21348	Canola	cytosol	25.78	35.8
Bra031373.1-P	Field mustard	cytosol	25.78	35.8
AT1G78100.1	Thale cress	cytosol	26.44	35.63
CDX87476	Canola	cytosol	25.11	35.2
Bra015630.1-P	Field mustard	cytosol	25.11	35.2
CDY38235	Canola	cytosol	25.33	35.19
CDY14629	Canola	cytosol	20.89	34.43
VIT_06s0009g03670.t01	Wine grape	cytosol	25.78	34.02
Bra008345.1-P	Field mustard	cytosol	23.78	33.75
VIT_06s0009g03680.t01	Wine grape	cytosol	15.33	33.17
PGSC0003DMT400097155	Potato	cytosol	24.67	31.71
CDY32130	Canola	cytosol	15.33	25.46

Protein Annotations

Gene3D:1.20.1280.50	MapMan:19.2.2.8.1.4.6	ProteinID:BAF17813.2	ProteinID:BAS94653.1	InterPro:F-box-like_dom_sf	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0006810	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0009506	GO:GO:0009719	GO:GO:0009736	GO:GO:0009914	GO:GO:0009987
EnsemblPlantsGene:Os05g0490300	EnsemblPlants:Os05t0490300-01	PANTHER:PTHR31215	PANTHER:PTHR31215:SF3	UniProt:Q0DH60	SUPFAM:SSF81383
UniParc:UPI0001B66D78	SEG:seg	:	:	:	:

Description

F-box protein 265Cyclin-like F-box domain containing protein. (Os05t0490300-01)

Coordinates

chr5:-:24089745..24091692

Molecular Weight (calculated)

50086.6 Da

IEP (calculated)

9.593

GRAVY (calculated)

-0.158

Length

450 amino acids

Sequence
(BLAST)

001: ENGATLLPIS RFRYRTVARR RRIRTRVGGE RLALAVDLVV ARCLRWLREP FGEDKVEEEQ QLLFVAFLLQ RLVLHFSATS RGGEGGRAFD PFLHFGWFPM
101: ARIHADPVLE ADQFDRLPDS LVLVILNNVE DVRSLGRCSA VSKRFYGLVP LVHDVYVKID RVVTVDGEAE DALNLSSPKP RNILSHFLKM MLFTIIKPFH
201: SMRGPNGAGR PLFPQLAQHS PAQVLRNFTH IRNLRVELPS GDVGTEEGVL LKWRAEYGST LQNCVILGGT QVDRKPVGAE HELYSEDNGS MPESFYTNGG
301: LKLRVVWTIS SLIAASTRHY LLRSIIKDHP TLTSLVLTDA DGQGTLSMGA EQLKEFRENQ LSASACSNRT QVPACNMKLK YAPYLELPGG IALQGATLVA
401: IKPSPEGSNG GHTSRKETDA FVSGAFDGPF KFAVKALMKR RTYLLEMNGF

Best Arabidopsis Sequence Match ( AT4G18380.1 )
(BLAST)

001: MAIILRSSDP LLSRIHPEPQ EIDHFDNLPD SILLLIFNNI GDVKALGRCS VVSKRFHSLI PQVENVFVRV DCVISDDDSS SLLSDKPRSA SAASPFSAIF
101: RLVFKPLQAL GQFLKRSGSS SLPSGSSPSS LLISGGDDGE IEQGGVTHHS PTQVLKNFDE IKFLKIELPS GELGIDDGVL LKWRAEFGST LENCVILGAS
201: SVIPPTNSDK TEASSAPVAA VEDNGSIPES FYTNGGLKLR VVWTISSLIA ASARHYLLQP IIAEHKTLDS LVLTDVDGQG VLCMNRDQLE ELRVKPLSAS
301: SASKRTLVPA LNMRLWYAPS LELPDGTVLK GATLVAIRPS ESKKEVCDVS WVSSAFDEPY GVAAKMLVKR RTYCLEMNSF

Arabidopsis Description

F-box protein At4g18380 [Source:UniProtKB/Swiss-Prot;Acc:O49508]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.