Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra016384.1-P | Field mustard | cytosol | 61.13 | 97.5 |
| CDX91668 | Canola | cytosol | 94.67 | 94.67 |
| CDY38235 | Canola | cytosol | 77.43 | 76.23 |
| CDY00435 | Canola | cytosol | 73.35 | 73.58 |
| CDY21348 | Canola | cytosol | 74.61 | 73.46 |
| CDY46634 | Canola | cytosol | 60.81 | 69.78 |
| AT1G22220.1 | Thale cress | cytosol | 64.26 | 65.29 |
| CDY26850 | Canola | cytosol | 54.23 | 58.05 |
| CDY14629 | Canola | cytosol | 49.22 | 57.51 |
| CDX87476 | Canola | cytosol | 57.68 | 57.32 |
| CDX88418 | Canola | cytosol | 57.68 | 57.32 |
| CDY32130 | Canola | cytosol | 47.96 | 56.46 |
| VIT_18s0001g05310.t01 | Wine grape | cytosol | 42.63 | 45.33 |
| Solyc04g072930.1.1 | Tomato | cytosol | 43.89 | 41.18 |
| PGSC0003DMT400024512 | Potato | cytosol | 43.57 | 40.88 |
| CDX78848 | Canola | cytosol | 10.34 | 34.02 |
| GSMUA_Achr7P21580_001 | Banana | cytosol | 36.99 | 33.43 |
| HORVU1Hr1G068570.1 | Barley | cytosol | 36.68 | 33.14 |
| HORVU0Hr1G030450.1 | Barley | cytosol | 36.68 | 33.14 |
| Zm00001d006501_P001 | Maize | cytosol | 22.57 | 33.03 |
| Os01t0812200-01 | Rice | cytosol | 36.36 | 32.86 |
| TraesCS1A01G307800.1 | Wheat | cytosol | 36.36 | 32.58 |
| TraesCS1B01G318500.1 | Wheat | cytosol | 36.36 | 32.58 |
| TraesCS1D01G307200.1 | Wheat | cytosol | 36.05 | 32.3 |
| TraesCS3B01G368000.1 | Wheat | cytosol | 35.74 | 32.2 |
| TraesCS3D01G518800.1 | Wheat | cytosol | 31.97 | 32.18 |
| GSMUA_Achr10P... | Banana | cytosol | 35.42 | 31.92 |
| TraesCS3D01G329900.1 | Wheat | cytosol | 35.11 | 31.46 |
| EES01639 | Sorghum | cytosol | 34.8 | 31.36 |
| Zm00001d038537_P001 | Maize | cytosol | 34.8 | 31.36 |
| EES19721 | Sorghum | cytosol | 34.48 | 31.07 |
| TraesCS3A01G336900.1 | Wheat | cytosol, peroxisome, plastid | 34.8 | 30.92 |
| CDX99890 | Canola | cytosol, golgi, nucleus | 35.11 | 30.52 |
| CDY33458 | Canola | cytosol | 34.17 | 30.28 |
| CDY26286 | Canola | cytosol, nucleus, vacuole | 35.42 | 30.21 |
| Zm00001d043125_P001 | Maize | cytosol | 32.92 | 30.0 |
| Zm00001d010640_P001 | Maize | cytosol, peroxisome, plastid | 33.23 | 29.94 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, peroxisome | 32.6 | 29.89 |
| GSMUA_Achr3P18400_001 | Banana | cytosol | 33.86 | 29.75 |
| CDX77641 | Canola | cytosol | 33.23 | 29.28 |
| CDY43956 | Canola | cytosol | 34.17 | 29.22 |
| CDX87738 | Canola | cytosol | 34.17 | 29.22 |
| TraesCS4A01G127600.1 | Wheat | cytosol, peroxisome, plastid | 33.54 | 28.84 |
| HORVU4Hr1G052070.1 | Barley | cytosol | 32.6 | 28.34 |
| TraesCS4B01G177100.1 | Wheat | cytosol | 32.92 | 28.3 |
| EER94941 | Sorghum | cytosol, peroxisome, plastid | 33.54 | 28.16 |
| Os03t0321300-01 | Rice | cytosol | 33.86 | 28.12 |
| TraesCS4D01G178800.1 | Wheat | cytosol, peroxisome, plastid | 32.29 | 27.99 |
| GSMUA_Achr6P32090_001 | Banana | cytosol | 30.72 | 27.76 |
| Zm00001d028957_P001 | Maize | cytosol | 29.47 | 27.01 |
| Os05t0490300-01 | Rice | mitochondrion | 36.68 | 26.0 |
| Zm00001d043016_P001 | Maize | plastid | 20.69 | 25.88 |
| Zm00001d047573_P001 | Maize | plastid | 34.8 | 25.52 |
| CDX99469 | Canola | nucleus | 16.3 | 22.91 |
| CDX78847 | Canola | cytosol | 15.99 | 21.43 |
| GSMUA_Achr6P15980_001 | Banana | mitochondrion | 33.23 | 14.21 |
Protein Annotations
| EnsemblPlants:CDY41488 | EnsemblPlantsGene:GSBRNA2T00073098001 | Gene3D:1.20.1280.50 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:F-box-like_dom_sf | PANTHER:PTHR31215 | ProteinID:CDY41488 | ProteinID:CDY41488.1 | SUPFAM:SSF81383 | UniParc:UPI0004EDC421 |
| UniProt:A0A078HXM1 | MapMan:19.2.2.8.1.4.6 | : | : | : | : |
Description
BnaA08g20900DBnaA08g20900D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HXM1]
Coordinates
chrLK032498:-:244043..245002
Molecular Weight (calculated)
35225.6 Da
IEP (calculated)
8.719
GRAVY (calculated)
-0.222
Length
319 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVFDGLPDP IVVYILDKVG DVKTLLRCSS LSKRFNSLVP QSESLILRLD QVVTTESPPD SPVSNFFKSV CKPFHGLFSL FSKPAKPIPT TNLSPVIPSK
101: LLSRFDRIKN LDVELLGGDA KPEKGAGIKW KADFGKTLKT CVVVAFRSAS TVSSSDGESD AEFVTGLKTR VEWTIKALMA ASTRHHLMSQ VVKEHKEMES
201: LVMHERGGEG TVVMKSEGLR EFRKTEVARD QELEERVEKK QRSVVPSVRM SMRHAPSLKL KSGICLESAT LVIVRPSEEY SDVGDDKLAT EAFAGSCMYG
301: EAVAALLKRN KNTLDMNSF
101: LLSRFDRIKN LDVELLGGDA KPEKGAGIKW KADFGKTLKT CVVVAFRSAS TVSSSDGESD AEFVTGLKTR VEWTIKALMA ASTRHHLMSQ VVKEHKEMES
201: LVMHERGGEG TVVMKSEGLR EFRKTEVARD QELEERVEKK QRSVVPSVRM SMRHAPSLKL KSGICLESAT LVIVRPSEEY SDVGDDKLAT EAFAGSCMYG
301: EAVAALLKRN KNTLDMNSF
001: MDVFDGLPDP IIVDILNKVG DVKTLLRCSS LSKRFNSLVP QSESLTLRLD HSVSDSPVVT SIFRSLFNGL VSLLSKPAKP ITITTLSPSL PFKILSRFDR
101: IRNLDVELPG GDVKLEKGAA VKWKAEFGKT LKSCVIVAFR SAGTVSSPVA VEGESDAEFV TGLKTRVVWT ISALMAASSR HYLMREVVKE HEEIESLVMR
201: DKEREGTVVM NEEGLKELRN TEARVEDEER VVKNKRSVVP SVRMSMRHAP SLKLKSGICL ESATLVIVRP SGADFEVGDD AELATEAFVG DCMYGEAVVA
301: LLKCKKNALE MNSF
101: IRNLDVELPG GDVKLEKGAA VKWKAEFGKT LKSCVIVAFR SAGTVSSPVA VEGESDAEFV TGLKTRVVWT ISALMAASSR HYLMREVVKE HEEIESLVMR
201: DKEREGTVVM NEEGLKELRN TEARVEDEER VVKNKRSVVP SVRMSMRHAP SLKLKSGICL ESATLVIVRP SGADFEVGDD AELATEAFVG DCMYGEAVVA
301: LLKCKKNALE MNSF
Arabidopsis Description
AUF2 [Source:UniProtKB/TrEMBL;Acc:A0A178W7K5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.