Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra016384.1-P | Field mustard | cytosol | 51.66 | 70.0 |
| CDY41488 | Canola | cytosol | 56.46 | 47.96 |
| CDX91668 | Canola | cytosol | 55.72 | 47.34 |
| CDY46634 | Canola | cytosol | 43.54 | 42.45 |
| CDY00435 | Canola | cytosol | 47.23 | 40.25 |
| CDY38235 | Canola | cytosol | 47.97 | 40.12 |
| CDY21348 | Canola | cytosol | 45.02 | 37.65 |
| AT1G22220.1 | Thale cress | cytosol | 43.17 | 37.26 |
| CDY14629 | Canola | cytosol | 36.53 | 36.26 |
| CDY26850 | Canola | cytosol | 37.64 | 34.23 |
| CDX88418 | Canola | cytosol | 38.01 | 32.09 |
| CDX87476 | Canola | cytosol | 37.64 | 31.78 |
| VIT_18s0001g05310.t01 | Wine grape | cytosol | 30.63 | 27.67 |
| PGSC0003DMT400024512 | Potato | cytosol | 29.15 | 23.24 |
| Solyc04g072930.1.1 | Tomato | cytosol | 29.15 | 23.24 |
| Zm00001d006501_P001 | Maize | cytosol | 17.34 | 21.56 |
| EES01639 | Sorghum | cytosol | 28.04 | 21.47 |
| Zm00001d043125_P001 | Maize | cytosol | 26.94 | 20.86 |
| Os01t0812200-01 | Rice | cytosol | 26.94 | 20.68 |
| TraesCS3B01G368000.1 | Wheat | cytosol | 26.94 | 20.62 |
| TraesCS3D01G329900.1 | Wheat | cytosol | 26.94 | 20.51 |
| HORVU1Hr1G068570.1 | Barley | cytosol | 26.57 | 20.4 |
| HORVU0Hr1G030450.1 | Barley | cytosol | 26.57 | 20.4 |
| GSMUA_Achr7P21580_001 | Banana | cytosol | 26.57 | 20.4 |
| GSMUA_Achr10P... | Banana | cytosol | 26.57 | 20.34 |
| TraesCS3A01G336900.1 | Wheat | cytosol, peroxisome, plastid | 26.2 | 19.78 |
| CDX99890 | Canola | cytosol, golgi, nucleus | 26.57 | 19.62 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, peroxisome | 25.09 | 19.54 |
| CDY26286 | Canola | cytosol, nucleus, vacuole | 26.94 | 19.52 |
| Zm00001d038537_P001 | Maize | cytosol | 25.46 | 19.49 |
| CDY33458 | Canola | cytosol | 25.83 | 19.44 |
| TraesCS4A01G127600.1 | Wheat | cytosol, peroxisome, plastid | 26.57 | 19.41 |
| TraesCS1D01G307200.1 | Wheat | cytosol | 25.46 | 19.38 |
| TraesCS1A01G307800.1 | Wheat | cytosol | 25.46 | 19.38 |
| TraesCS1B01G318500.1 | Wheat | cytosol | 25.46 | 19.38 |
| TraesCS3D01G518800.1 | Wheat | cytosol | 22.51 | 19.24 |
| EES19721 | Sorghum | cytosol | 25.09 | 19.21 |
| HORVU4Hr1G052070.1 | Barley | cytosol | 25.83 | 19.07 |
| TraesCS4B01G177100.1 | Wheat | cytosol | 25.83 | 18.87 |
| TraesCS4D01G178800.1 | Wheat | cytosol, peroxisome, plastid | 25.46 | 18.75 |
| Os03t0321300-01 | Rice | cytosol | 26.57 | 18.75 |
| EER94941 | Sorghum | cytosol, peroxisome, plastid | 26.2 | 18.68 |
| Zm00001d010640_P001 | Maize | cytosol, peroxisome, plastid | 24.35 | 18.64 |
| CDX77641 | Canola | cytosol | 24.72 | 18.51 |
| CDX87738 | Canola | cytosol | 25.09 | 18.23 |
| GSMUA_Achr3P18400_001 | Banana | cytosol | 24.35 | 18.18 |
| CDY43956 | Canola | cytosol | 24.72 | 17.96 |
| GSMUA_Achr6P32090_001 | Banana | cytosol | 23.25 | 17.85 |
| Zm00001d028957_P001 | Maize | cytosol | 21.77 | 16.95 |
| Zm00001d043016_P001 | Maize | plastid | 15.87 | 16.86 |
| CDX78848 | Canola | cytosol | 5.54 | 15.46 |
| Zm00001d047573_P001 | Maize | plastid | 24.72 | 15.4 |
| Os05t0490300-01 | Rice | mitochondrion | 25.46 | 15.33 |
| CDX99469 | Canola | nucleus | 12.18 | 14.54 |
| CDX78847 | Canola | cytosol | 12.55 | 14.29 |
| GSMUA_Achr6P15980_001 | Banana | mitochondrion | 24.72 | 8.98 |
Protein Annotations
| EnsemblPlants:CDY32130 | EnsemblPlantsGene:GSBRNA2T00051497001 | PANTHER:PTHR31215 | ProteinID:CDY32130 | ProteinID:CDY32130.1 | SEG:seg |
| UniParc:UPI0004EEF0D1 | UniProt:A0A078H0C6 | MapMan:19.2.2.8.1.4.6 | : | : | : |
Description
BnaCnng06390DBnaCnng06390D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H0C6]
Coordinates
chrLK032288:+:19532..20873
Molecular Weight (calculated)
30339.4 Da
IEP (calculated)
7.074
GRAVY (calculated)
-0.408
Length
271 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVFDGLPDP ILVDILDKSE SLVLRLDHAV TTESQPDSPV SNFFKSLFKP FHGFFSLFPK PAKPTTTTII SPIIPSKILS RFDRIKNLDV ERPGGDAKPE
101: KSAGIKWKAD FGKTLKTCVV VAFRSASTVS SSSDGELDAE FVTGLKTRVE WTINALMATS ARHHLMSRAS GRSRRTFTRD PIAHNVHPPL SRVVKEHKEM
201: ESLVMLLVMG LTHTQKLMHE RGGEGTVVMK CEGLREFQEA ARDLEVEERV ERKTEECGPE REDEHETRAV S
101: KSAGIKWKAD FGKTLKTCVV VAFRSASTVS SSSDGELDAE FVTGLKTRVE WTINALMATS ARHHLMSRAS GRSRRTFTRD PIAHNVHPPL SRVVKEHKEM
201: ESLVMLLVMG LTHTQKLMHE RGGEGTVVMK CEGLREFQEA ARDLEVEERV ERKTEECGPE REDEHETRAV S
001: MDVFDGLPDP IIVDILNKVG DVKTLLRCSS LSKRFNSLVP QSESLTLRLD HSVSDSPVVT SIFRSLFNGL VSLLSKPAKP ITITTLSPSL PFKILSRFDR
101: IRNLDVELPG GDVKLEKGAA VKWKAEFGKT LKSCVIVAFR SAGTVSSPVA VEGESDAEFV TGLKTRVVWT ISALMAASSR HYLMREVVKE HEEIESLVMR
201: DKEREGTVVM NEEGLKELRN TEARVEDEER VVKNKRSVVP SVRMSMRHAP SLKLKSGICL ESATLVIVRP SGADFEVGDD AELATEAFVG DCMYGEAVVA
301: LLKCKKNALE MNSF
101: IRNLDVELPG GDVKLEKGAA VKWKAEFGKT LKSCVIVAFR SAGTVSSPVA VEGESDAEFV TGLKTRVVWT ISALMAASSR HYLMREVVKE HEEIESLVMR
201: DKEREGTVVM NEEGLKELRN TEARVEDEER VVKNKRSVVP SVRMSMRHAP SLKLKSGICL ESATLVIVRP SGADFEVGDD AELATEAFVG DCMYGEAVVA
301: LLKCKKNALE MNSF
Arabidopsis Description
AUF2 [Source:UniProtKB/TrEMBL;Acc:A0A178W7K5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.