Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra016384.1-P | Field mustard | cytosol | 42.99 | 67.5 |
| Bra031373.1-P | Field mustard | cytosol | 68.15 | 66.05 |
| CDX91668 | Canola | cytosol | 66.24 | 65.2 |
| CDY41488 | Canola | cytosol | 65.29 | 64.26 |
| CDY46634 | Canola | cytosol | 56.37 | 63.67 |
| Bra012314.1-P | Field mustard | cytosol | 64.01 | 63.21 |
| CDY00435 | Canola | cytosol | 63.69 | 62.89 |
| CDY21348 | Canola | cytosol | 64.65 | 62.65 |
| CDY38235 | Canola | cytosol | 63.69 | 61.73 |
| AT1G78100.1 | Thale cress | cytosol | 62.74 | 58.98 |
| VIT_18s0001g05310.t01 | Wine grape | cytosol | 47.13 | 49.33 |
| PGSC0003DMT400024512 | Potato | cytosol | 47.13 | 43.53 |
| CDY32130 | Canola | cytosol | 37.26 | 43.17 |
| Solyc04g072930.1.1 | Tomato | cytosol | 46.5 | 42.94 |
| GSMUA_Achr7P21580_001 | Banana | cytosol | 38.22 | 33.99 |
| Zm00001d006501_P001 | Maize | cytosol | 23.57 | 33.95 |
| TraesCS3D01G329900.1 | Wheat | cytosol | 37.58 | 33.15 |
| Os01t0812200-01 | Rice | cytosol | 37.26 | 33.14 |
| TraesCS3B01G368000.1 | Wheat | cytosol | 37.26 | 33.05 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, peroxisome | 36.62 | 33.05 |
| HORVU1Hr1G068570.1 | Barley | cytosol | 36.94 | 32.86 |
| HORVU0Hr1G030450.1 | Barley | cytosol | 36.94 | 32.86 |
| TraesCS1B01G318500.1 | Wheat | cytosol | 36.94 | 32.58 |
| TraesCS1A01G307800.1 | Wheat | cytosol | 36.94 | 32.58 |
| TraesCS1D01G307200.1 | Wheat | cytosol | 36.62 | 32.3 |
| Zm00001d038537_P001 | Maize | cytosol | 35.99 | 31.92 |
| TraesCS3D01G518800.1 | Wheat | cytosol | 32.17 | 31.86 |
| TraesCS3A01G336900.1 | Wheat | cytosol, peroxisome, plastid | 36.31 | 31.75 |
| GSMUA_Achr3P18400_001 | Banana | cytosol | 36.62 | 31.68 |
| EES01639 | Sorghum | cytosol | 35.67 | 31.64 |
| Zm00001d043125_P001 | Maize | cytosol | 35.03 | 31.43 |
| GSMUA_Achr10P... | Banana | cytosol | 35.35 | 31.36 |
| EES19721 | Sorghum | cytosol | 35.35 | 31.36 |
| AT4G18380.1 | Thale cress | cytosol | 37.9 | 31.32 |
| Zm00001d010640_P001 | Maize | cytosol, peroxisome, plastid | 34.08 | 30.23 |
| TraesCS4A01G127600.1 | Wheat | cytosol, peroxisome, plastid | 35.35 | 29.92 |
| AT1G30200.2 | Thale cress | cytosol | 35.67 | 29.55 |
| AT5G46170.1 | Thale cress | cytosol, plastid | 36.94 | 29.37 |
| HORVU4Hr1G052070.1 | Barley | cytosol | 34.08 | 29.16 |
| TraesCS4B01G177100.1 | Wheat | cytosol | 34.39 | 29.11 |
| EER94941 | Sorghum | cytosol, peroxisome, plastid | 35.03 | 28.95 |
| Os03t0321300-01 | Rice | cytosol | 35.35 | 28.91 |
| GSMUA_Achr6P32090_001 | Banana | cytosol | 32.48 | 28.9 |
| TraesCS4D01G178800.1 | Wheat | cytosol, peroxisome, plastid | 33.76 | 28.8 |
| Zm00001d043016_P001 | Maize | plastid | 22.29 | 27.45 |
| Zm00001d028957_P001 | Maize | cytosol | 29.62 | 26.72 |
| Os05t0490300-01 | Rice | mitochondrion | 37.26 | 26.0 |
| Zm00001d047573_P001 | Maize | plastid | 35.99 | 25.98 |
| GSMUA_Achr6P15980_001 | Banana | mitochondrion | 34.71 | 14.61 |
Protein Annotations
| MapMan:19.2.2.8.1.4.6 | Gene3D:3.80.10.10 | EntrezGene:838827 | UniProt:A0A178W7K5 | ProteinID:AAF87851.1 | ProteinID:AEE30213.1 |
| EMBL:AK176237 | ArrayExpress:AT1G22220 | EnsemblPlantsGene:AT1G22220 | RefSeq:AT1G22220 | TAIR:AT1G22220 | RefSeq:AT1G22220-TAIR-G |
| EnsemblPlants:AT1G22220.1 | TAIR:AT1G22220.1 | EMBL:BT012651 | ncoils:Coil | InterPro:F-box-like_dom_sf | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0009506 | GO:GO:0009719 | GO:GO:0009736 | GO:GO:0009914 | GO:GO:0009987 |
| InterPro:IPR032675 | InterPro:LRR_dom_sf | RefSeq:NP_173641.1 | ProteinID:OAP14126.1 | PANTHER:PTHR31215 | UniProt:Q9LM18 |
| SUPFAM:SSF81383 | UniParc:UPI00000A4A68 | : | : | : | : |
Description
AUF2 [Source:UniProtKB/TrEMBL;Acc:A0A178W7K5]
Coordinates
chr1:+:7846459..7847836
Molecular Weight (calculated)
34500.9 Da
IEP (calculated)
6.923
GRAVY (calculated)
-0.020
Length
314 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVFDGLPDP IIVDILNKVG DVKTLLRCSS LSKRFNSLVP QSESLTLRLD HSVSDSPVVT SIFRSLFNGL VSLLSKPAKP ITITTLSPSL PFKILSRFDR
101: IRNLDVELPG GDVKLEKGAA VKWKAEFGKT LKSCVIVAFR SAGTVSSPVA VEGESDAEFV TGLKTRVVWT ISALMAASSR HYLMREVVKE HEEIESLVMR
201: DKEREGTVVM NEEGLKELRN TEARVEDEER VVKNKRSVVP SVRMSMRHAP SLKLKSGICL ESATLVIVRP SGADFEVGDD AELATEAFVG DCMYGEAVVA
301: LLKCKKNALE MNSF
101: IRNLDVELPG GDVKLEKGAA VKWKAEFGKT LKSCVIVAFR SAGTVSSPVA VEGESDAEFV TGLKTRVVWT ISALMAASSR HYLMREVVKE HEEIESLVMR
201: DKEREGTVVM NEEGLKELRN TEARVEDEER VVKNKRSVVP SVRMSMRHAP SLKLKSGICL ESATLVIVRP SGADFEVGDD AELATEAFVG DCMYGEAVVA
301: LLKCKKNALE MNSF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.