Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY21348 | Canola | cytosol | 90.74 | 90.74 |
| CDY38235 | Canola | cytosol | 87.04 | 87.04 |
| Bra016384.1-P | Field mustard | cytosol | 46.3 | 75.0 |
| Bra012314.1-P | Field mustard | cytosol | 73.15 | 74.53 |
| AT1G22220.1 | Thale cress | cytosol | 66.05 | 68.15 |
| Bra015630.1-P | Field mustard | cytosol | 58.64 | 59.19 |
| Bra008345.1-P | Field mustard | cytosol | 55.86 | 57.1 |
| VIT_18s0001g05310.t01 | Wine grape | cytosol | 42.9 | 46.33 |
| Solyc04g072930.1.1 | Tomato | cytosol | 44.44 | 42.35 |
| PGSC0003DMT400024512 | Potato | cytosol | 44.14 | 42.06 |
| Zm00001d006501_P001 | Maize | cytosol | 24.38 | 36.24 |
| HORVU0Hr1G030450.1 | Barley | cytosol | 36.42 | 33.43 |
| HORVU1Hr1G068570.1 | Barley | cytosol | 36.42 | 33.43 |
| TraesCS1A01G307800.1 | Wheat | cytosol | 36.42 | 33.15 |
| TraesCS1B01G318500.1 | Wheat | cytosol | 36.42 | 33.15 |
| Os01t0812200-01 | Rice | cytosol | 36.11 | 33.14 |
| GSMUA_Achr7P21580_001 | Banana | cytosol | 36.11 | 33.14 |
| TraesCS1D01G307200.1 | Wheat | cytosol | 36.11 | 32.87 |
| TraesCS3B01G368000.1 | Wheat | cytosol | 35.49 | 32.49 |
| TraesCS3D01G329900.1 | Wheat | cytosol | 35.49 | 32.3 |
| TraesCS3D01G518800.1 | Wheat | cytosol | 31.48 | 32.18 |
| EES19721 | Sorghum | cytosol | 34.88 | 31.92 |
| GSMUA_Achr10P... | Banana | cytosol | 34.57 | 31.64 |
| Zm00001d038537_P001 | Maize | cytosol | 34.57 | 31.64 |
| EES01639 | Sorghum | cytosol | 34.57 | 31.64 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, peroxisome | 33.33 | 31.03 |
| TraesCS3A01G336900.1 | Wheat | cytosol, peroxisome, plastid | 34.26 | 30.92 |
| Zm00001d043125_P001 | Maize | cytosol | 33.33 | 30.86 |
| Zm00001d010640_P001 | Maize | cytosol, peroxisome, plastid | 33.64 | 30.79 |
| GSMUA_Achr3P18400_001 | Banana | cytosol | 34.26 | 30.58 |
| Bra013303.1-P | Field mustard | cytosol | 35.19 | 30.24 |
| Bra022022.1-P | Field mustard | cytosol | 34.26 | 29.92 |
| GSMUA_Achr6P32090_001 | Banana | cytosol | 32.1 | 29.46 |
| Os03t0321300-01 | Rice | cytosol | 34.57 | 29.17 |
| Bra025034.1-P | Field mustard | cytosol | 33.64 | 29.14 |
| TraesCS4A01G127600.1 | Wheat | cytosol, peroxisome, plastid | 33.33 | 29.11 |
| EER94941 | Sorghum | cytosol, peroxisome, plastid | 33.95 | 28.95 |
| HORVU4Hr1G052070.1 | Barley | cytosol | 32.72 | 28.88 |
| TraesCS4B01G177100.1 | Wheat | cytosol | 32.72 | 28.57 |
| Bra032364.1-P | Field mustard | cytosol, nucleus, vacuole | 32.72 | 28.34 |
| TraesCS4D01G178800.1 | Wheat | cytosol, peroxisome, plastid | 32.1 | 28.26 |
| Zm00001d028957_P001 | Maize | cytosol | 29.63 | 27.59 |
| Zm00001d047573_P001 | Maize | plastid | 35.8 | 26.67 |
| Zm00001d043016_P001 | Maize | plastid | 20.68 | 26.27 |
| Os05t0490300-01 | Rice | mitochondrion | 35.8 | 25.78 |
| GSMUA_Achr6P15980_001 | Banana | mitochondrion | 33.02 | 14.34 |
Protein Annotations
| EnsemblPlants:Bra031373.1 | EnsemblPlants:Bra031373.1-P | EnsemblPlantsGene:Bra031373 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:F-box-like_dom_sf | PANTHER:PTHR31215 | SEG:seg | SUPFAM:SSF81383 | UniParc:UPI0002547526 | UniProt:M4ERE9 |
| MapMan:19.2.2.8.1.4.6 | : | : | : | : | : |
Description
AT1G22220 (E=1e-114) | F-box family protein
Coordinates
chrA05:-:15655525..15656499
Molecular Weight (calculated)
35052.1 Da
IEP (calculated)
5.501
GRAVY (calculated)
-0.114
Length
324 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVFDGLPDA IIVDVLNKVG DVRTLLRCSS LSKRFNSLVP QSESLILRLD QVGTTESQPD SPVSNIFTSV LKSFHGLCSL FSKPAKPIPI KNLSPNIPSK
101: ILSPFDRVKN LEVELPGGDA SLEKGAAVKW KAEHGETLET LVVVAFRSAS TESSPASASS DGESDAEFVT GLKTRVMWTI SALMAASTRH FLMSQVVKEH
201: EEMESLVIRD RGGEGTLVMG TEGLREFRKM EAARGGAAVD ERVEKNRSVV PSVRMSMRHA PSLKLKSGIC LESATLVIVR PSEGYSDDGD DELATEAFAG
301: NCMYGEAVVA LLKCKKNALE MNSF
101: ILSPFDRVKN LEVELPGGDA SLEKGAAVKW KAEHGETLET LVVVAFRSAS TESSPASASS DGESDAEFVT GLKTRVMWTI SALMAASTRH FLMSQVVKEH
201: EEMESLVIRD RGGEGTLVMG TEGLREFRKM EAARGGAAVD ERVEKNRSVV PSVRMSMRHA PSLKLKSGIC LESATLVIVR PSEGYSDDGD DELATEAFAG
301: NCMYGEAVVA LLKCKKNALE MNSF
001: MDVFDGLPDP IIVDILNKVG DVKTLLRCSS LSKRFNSLVP QSESLTLRLD HSVSDSPVVT SIFRSLFNGL VSLLSKPAKP ITITTLSPSL PFKILSRFDR
101: IRNLDVELPG GDVKLEKGAA VKWKAEFGKT LKSCVIVAFR SAGTVSSPVA VEGESDAEFV TGLKTRVVWT ISALMAASSR HYLMREVVKE HEEIESLVMR
201: DKEREGTVVM NEEGLKELRN TEARVEDEER VVKNKRSVVP SVRMSMRHAP SLKLKSGICL ESATLVIVRP SGADFEVGDD AELATEAFVG DCMYGEAVVA
301: LLKCKKNALE MNSF
101: IRNLDVELPG GDVKLEKGAA VKWKAEFGKT LKSCVIVAFR SAGTVSSPVA VEGESDAEFV TGLKTRVVWT ISALMAASSR HYLMREVVKE HEEIESLVMR
201: DKEREGTVVM NEEGLKELRN TEARVEDEER VVKNKRSVVP SVRMSMRHAP SLKLKSGICL ESATLVIVRP SGADFEVGDD AELATEAFVG DCMYGEAVVA
301: LLKCKKNALE MNSF
Arabidopsis Description
AUF2 [Source:UniProtKB/TrEMBL;Acc:A0A178W7K5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.