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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 3
  • plastid 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY33458 Canola cytosol 93.58 97.22
AT5G46170.1 Thale cress cytosol, plastid 85.29 80.76
Bra022022.1-P Field mustard cytosol 78.61 79.25
Bra013303.1-P Field mustard cytosol 75.67 75.07
VIT_10s0003g03880.t01 Wine grape cytosol 76.47 71.68
Bra032364.1-P Field mustard cytosol, nucleus, vacuole 70.59 70.59
KRH21091 Soybean cytosol 72.73 70.28
KRH11156 Soybean cytosol, nucleus, vacuole 71.12 69.09
GSMUA_Achr7P07910_001 Banana cytosol 59.89 58.49
GSMUA_Achr4P22940_001 Banana cytosol 57.22 57.37
GSMUA_Achr2P17340_001 Banana cytosol 54.01 56.74
GSMUA_Achr4P31500_001 Banana cytosol 49.47 55.56
GSMUA_Achr5P02540_001 Banana cytosol 49.73 55.52
Os05t0510400-02 Rice cytosol 60.16 54.61
TraesCS1B01G342700.1 Wheat cytosol 58.02 52.29
Zm00001d000314_P001 Maize cytosol 57.49 52.18
Os01t0770400-01 Rice cytosol 55.08 52.02
TraesCS1D01G331400.1 Wheat cytosol 59.09 51.76
TraesCS3A01G296700.1 Wheat cytosol 55.35 51.62
TraesCS1A01G329300.1 Wheat cytosol, mitochondrion 58.02 51.54
TraesCS3B01G340400.1 Wheat cytosol 55.08 51.24
Zm00001d010705_P001 Maize cytosol 56.42 51.21
TraesCS3D01G306000.1 Wheat cytosol 54.81 51.12
GSMUA_Achr11P... Banana extracellular 10.16 50.0
KXG22318 Sorghum cytosol 56.42 49.65
OQU78753 Sorghum cytosol 48.66 49.06
Zm00001d043324_P001 Maize cytosol 52.14 48.63
Zm00001d012644_P001 Maize cytosol 52.94 48.29
EES03683 Sorghum cytosol 52.94 47.37
EES01093 Sorghum cytosol 52.14 46.65
GSMUA_Achr7P01170_001 Banana mitochondrion 50.53 46.21
HORVU1Hr1G077600.2 Barley plastid 58.02 44.56
GSMUA_Achr10P... Banana cytosol 33.16 43.06
HORVU3Hr1G075050.2 Barley plastid 54.81 42.8
Bra016384.1-P Field mustard cytosol 20.32 38.0
Bra012314.1-P Field mustard cytosol 29.95 35.22
Bra031373.1-P Field mustard cytosol 29.14 33.64
Bra015630.1-P Field mustard cytosol 28.34 33.02
Bra008345.1-P Field mustard cytosol 26.47 31.23
Zm00001d006500_P001 Maize cytosol 26.74 24.69
Protein Annotations
EnsemblPlants:Bra025034.1EnsemblPlants:Bra025034.1-PEnsemblPlantsGene:Bra025034Gene3D:1.20.1280.50GO:GO:0003674GO:GO:0005488
GO:GO:0005515InterPro:F-box-like_dom_sfInterPro:F-box_domInterPro:IPR001810PANTHER:PTHR31215PANTHER:PTHR31215:SF2
PFAM:PF12937SEG:segSMART:SM00256SUPFAM:SSF81383UniParc:UPI000253FBDFUniProt:M4E8C8
MapMan:19.2.2.8.1.4.6:::::
Description
AT4G18380 (E=5e-142) | F-box family protein
Coordinates
chrA06:+:24819842..24820966
Molecular Weight (calculated)
40768.9 Da
IEP (calculated)
7.824
GRAVY (calculated)
-0.068
Length
374 amino acids
Sequence
(BLAST)
001: MARSDPPSRI HPEPQRIDHF DHLPDSILLL VFNKISDVKS LGRCCVVSRR FHSLVTQVEN VLIRVDCVIS DDDNSSLSSI KSRSAASGPF SNLFRLVVGG
101: IVKPLQALGQ FLGARRSCGS SSSSSSSLSI SGDEGGEIEQ GGVTHHSPTQ VLKNFEEIRY LRIELPSGEL GIDDGVLLKW RAEFGSTLDH CVILGASSVI
201: QPNPIRVSQP VESSDDTGSI PESFYTNGGL KLRVVWTISS LIAASARHYL LQPIIAEHKT LRSLVLSDSD GQGVLCMNRD QLEELRVKPL SASSASKRTL
301: VPALNMRLWY APTLELPDGT VLKGATLVAI RPSESKKEVS DVLWVSSAAF GEPYKAAVKM LVKRKTYCLE MNSF
Best Arabidopsis Sequence Match ( AT5G46170.1 )
(BLAST)
001: MAVIIPRSDP PSRIHPEPPQ TLEIDHFDHL PDSILLLVFN KIGDVKALGR CCVVSRRFHS LVPQVDNVVV RVDCVISDDD SSSLSSIKSR SGSSAGSFSA
101: IFRLVVGGIV KPLQALGQFL GTKRSSSSCG GSGSSSSSLS ISGDDDGGEI EQGGVTHHSP TQVLKNFDEI RYLRIELPSG ELGIDDGVLL KWRAEFGSTL
201: DNCVILGASS VIPPNPMRVS QACDTTTVVE APGSGSDDNG SIPESFYTNG GLKLRVVWTI SSLIAASARH YLLQPIIAEH KTLDSLVLTD SDGQGVLCMN
301: RDQLEELRVK PLAASSASKR TLVPALNMRL WYAPTLELPD GTVLKGATLV AIRPSESKKE VSDISWVSSA FEEPYETAAK MLVKRRTYCL EMNSF
Arabidopsis Description
F-box protein At5g46170 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNK5]
SUBAcon: [cytosol,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.