Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
OQU78753 | Sorghum | cytosol | 84.21 | 94.88 |
EES01093 | Sorghum | cytosol | 94.74 | 94.74 |
Zm00001d012644_P001 | Maize | cytosol | 83.97 | 85.61 |
Zm00001d043324_P001 | Maize | cytosol | 81.1 | 84.54 |
Os01t0770400-01 | Rice | cytosol | 71.29 | 75.25 |
TraesCS3D01G306000.1 | Wheat | cytosol | 69.14 | 72.07 |
TraesCS3B01G340400.1 | Wheat | cytosol | 69.14 | 71.89 |
TraesCS3A01G296700.1 | Wheat | cytosol | 68.9 | 71.82 |
Solyc02g070480.2.1 | Tomato | cytosol | 28.47 | 61.98 |
CDX78848 | Canola | cytosol | 14.11 | 60.82 |
GSMUA_Achr4P31500_001 | Banana | cytosol | 47.37 | 59.46 |
HORVU3Hr1G075050.2 | Barley | plastid | 67.94 | 59.29 |
GSMUA_Achr4P22940_001 | Banana | cytosol | 52.39 | 58.71 |
GSMUA_Achr5P02540_001 | Banana | cytosol | 46.89 | 58.51 |
GSMUA_Achr7P07910_001 | Banana | cytosol | 53.59 | 58.49 |
GSMUA_Achr2P17340_001 | Banana | cytosol | 49.76 | 58.43 |
Bra022022.1-P | Field mustard | cytosol | 50.72 | 57.14 |
CDY43956 | Canola | cytosol | 50.72 | 56.84 |
CDX87738 | Canola | cytosol | 50.72 | 56.84 |
KXG22318 | Sorghum | cytosol | 56.94 | 56.0 |
KRH21091 | Soybean | cytosol | 50.96 | 55.04 |
CDY33458 | Canola | cytosol | 47.37 | 55.0 |
AT4G18380.1 | Thale cress | cytosol | 49.76 | 54.74 |
VIT_10s0003g03880.t01 | Wine grape | cytosol | 52.15 | 54.64 |
KRH11156 | Soybean | cytosol, nucleus, vacuole | 50.24 | 54.55 |
GSMUA_Achr11P... | Banana | extracellular | 9.81 | 53.95 |
Bra013303.1-P | Field mustard | cytosol | 48.56 | 53.85 |
CDX77641 | Canola | cytosol | 46.17 | 53.31 |
Bra025034.1-P | Field mustard | cytosol | 47.37 | 52.94 |
AT5G46170.1 | Thale cress | cytosol, plastid | 50.0 | 52.91 |
PGSC0003DMT400054525 | Potato | cytosol | 46.41 | 52.86 |
Bra032364.1-P | Field mustard | cytosol, nucleus, vacuole | 46.89 | 52.41 |
CDY26286 | Canola | cytosol, nucleus, vacuole | 46.89 | 52.41 |
AT1G30200.2 | Thale cress | cytosol | 47.37 | 52.24 |
CDX99890 | Canola | cytosol, golgi, nucleus | 45.69 | 52.04 |
PGSC0003DMT400049024 | Potato | cytosol | 46.65 | 50.13 |
GSMUA_Achr7P01170_001 | Banana | mitochondrion | 48.09 | 49.14 |
Solyc08g048430.2.1 | Tomato | cytosol | 36.84 | 47.24 |
EES19721 | Sorghum | cytosol | 38.04 | 44.92 |
EES01639 | Sorghum | cytosol | 37.56 | 44.35 |
EER94941 | Sorghum | cytosol, peroxisome, plastid | 37.8 | 41.58 |
CDX99469 | Canola | nucleus | 19.62 | 36.12 |
CDX78847 | Canola | cytosol | 16.03 | 28.15 |
PGSC0003DMT400002031 | Potato | extracellular | 8.85 | 23.12 |
PGSC0003DMT400054900 | Potato | extracellular, plasma membrane | 8.13 | 21.25 |
Protein Annotations
MapMan:19.2.2.8.1.4.6 | EntrezGene:8079263 | UniProt:C5XKZ7 | EnsemblPlants:EES03683 | ProteinID:EES03683 | ProteinID:EES03683.1 |
InterPro:F-box-like_dom_sf | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0006810 |
GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009506 | GO:GO:0009719 | GO:GO:0009736 |
GO:GO:0009914 | GO:GO:0009987 | PANTHER:PTHR31215 | PANTHER:PTHR31215:SF7 | EnsemblPlantsGene:SORBI_3003G309900 | SUPFAM:SSF81383 |
UniParc:UPI0001A85610 | RefSeq:XP_002458563.1 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr3:-:63818469..63821515
Molecular Weight (calculated)
44154.8 Da
IEP (calculated)
6.054
GRAVY (calculated)
-0.049
Length
418 amino acids
Sequence
(BLAST)
(BLAST)
001: MELEAAPRQQ QQLEEEEEEV VGCTCGGGAE AADQFERLHD AVLLDVLNRI GDVKALGRCA LVSRRFHALV PLVDSVFVRV DCVIPDDPTP SAAAAAPGSA
101: PHQAPATAAR GRGGALAHMA RVLLGGIARP IHALGQILSP AAAAVSRRSD PPLPASPPAP VADVSHHSPS EVLRSFRELR RLHIELPTGE LGIDDGVLLK
201: WKADFGSTLG SCVILGASSV LSKPPTGSTT QAEPAAADST AAALDTSRET EEPGSLPDSL YTNGGLKLRV VWTISSLIAA SARHYLLHPI ICNHETLESL
301: DLTDADGQGV LTMDKRQLQE LRVRPVSPSG SSHRTLMPAL SMRLHYAPLI ELPGGTLLKG ATLVAIRPSE DALREGQGAG AAGPVGTCWI SEAFEEPYRT
401: AAKVLLKRRA YCLEMNSF
101: PHQAPATAAR GRGGALAHMA RVLLGGIARP IHALGQILSP AAAAVSRRSD PPLPASPPAP VADVSHHSPS EVLRSFRELR RLHIELPTGE LGIDDGVLLK
201: WKADFGSTLG SCVILGASSV LSKPPTGSTT QAEPAAADST AAALDTSRET EEPGSLPDSL YTNGGLKLRV VWTISSLIAA SARHYLLHPI ICNHETLESL
301: DLTDADGQGV LTMDKRQLQE LRVRPVSPSG SSHRTLMPAL SMRLHYAPLI ELPGGTLLKG ATLVAIRPSE DALREGQGAG AAGPVGTCWI SEAFEEPYRT
401: AAKVLLKRRA YCLEMNSF
001: MAVIIPRSDP PSRIHPEPPQ TLEIDHFDHL PDSILLLVFN KIGDVKALGR CCVVSRRFHS LVPQVDNVVV RVDCVISDDD SSSLSSIKSR SGSSAGSFSA
101: IFRLVVGGIV KPLQALGQFL GTKRSSSSCG GSGSSSSSLS ISGDDDGGEI EQGGVTHHSP TQVLKNFDEI RYLRIELPSG ELGIDDGVLL KWRAEFGSTL
201: DNCVILGASS VIPPNPMRVS QACDTTTVVE APGSGSDDNG SIPESFYTNG GLKLRVVWTI SSLIAASARH YLLQPIIAEH KTLDSLVLTD SDGQGVLCMN
301: RDQLEELRVK PLAASSASKR TLVPALNMRL WYAPTLELPD GTVLKGATLV AIRPSESKKE VSDISWVSSA FEEPYETAAK MLVKRRTYCL EMNSF
101: IFRLVVGGIV KPLQALGQFL GTKRSSSSCG GSGSSSSSLS ISGDDDGGEI EQGGVTHHSP TQVLKNFDEI RYLRIELPSG ELGIDDGVLL KWRAEFGSTL
201: DNCVILGASS VIPPNPMRVS QACDTTTVVE APGSGSDDNG SIPESFYTNG GLKLRVVWTI SSLIAASARH YLLQPIIAEH KTLDSLVLTD SDGQGVLCMN
301: RDQLEELRVK PLAASSASKR TLVPALNMRL WYAPTLELPD GTVLKGATLV AIRPSESKKE VSDISWVSSA FEEPYETAAK MLVKRRTYCL EMNSF
Arabidopsis Description
F-box protein At5g46170 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNK5]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.