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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 3
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
OQU78753 Sorghum cytosol 84.21 94.88
EES01093 Sorghum cytosol 94.74 94.74
Zm00001d012644_P001 Maize cytosol 83.97 85.61
Zm00001d043324_P001 Maize cytosol 81.1 84.54
Os01t0770400-01 Rice cytosol 71.29 75.25
TraesCS3D01G306000.1 Wheat cytosol 69.14 72.07
TraesCS3B01G340400.1 Wheat cytosol 69.14 71.89
TraesCS3A01G296700.1 Wheat cytosol 68.9 71.82
Solyc02g070480.2.1 Tomato cytosol 28.47 61.98
CDX78848 Canola cytosol 14.11 60.82
GSMUA_Achr4P31500_001 Banana cytosol 47.37 59.46
HORVU3Hr1G075050.2 Barley plastid 67.94 59.29
GSMUA_Achr4P22940_001 Banana cytosol 52.39 58.71
GSMUA_Achr5P02540_001 Banana cytosol 46.89 58.51
GSMUA_Achr7P07910_001 Banana cytosol 53.59 58.49
GSMUA_Achr2P17340_001 Banana cytosol 49.76 58.43
Bra022022.1-P Field mustard cytosol 50.72 57.14
CDY43956 Canola cytosol 50.72 56.84
CDX87738 Canola cytosol 50.72 56.84
KXG22318 Sorghum cytosol 56.94 56.0
KRH21091 Soybean cytosol 50.96 55.04
CDY33458 Canola cytosol 47.37 55.0
AT4G18380.1 Thale cress cytosol 49.76 54.74
VIT_10s0003g03880.t01 Wine grape cytosol 52.15 54.64
KRH11156 Soybean cytosol, nucleus, vacuole 50.24 54.55
GSMUA_Achr11P... Banana extracellular 9.81 53.95
Bra013303.1-P Field mustard cytosol 48.56 53.85
CDX77641 Canola cytosol 46.17 53.31
Bra025034.1-P Field mustard cytosol 47.37 52.94
AT5G46170.1 Thale cress cytosol, plastid 50.0 52.91
PGSC0003DMT400054525 Potato cytosol 46.41 52.86
Bra032364.1-P Field mustard cytosol, nucleus, vacuole 46.89 52.41
CDY26286 Canola cytosol, nucleus, vacuole 46.89 52.41
AT1G30200.2 Thale cress cytosol 47.37 52.24
CDX99890 Canola cytosol, golgi, nucleus 45.69 52.04
PGSC0003DMT400049024 Potato cytosol 46.65 50.13
GSMUA_Achr7P01170_001 Banana mitochondrion 48.09 49.14
Solyc08g048430.2.1 Tomato cytosol 36.84 47.24
EES19721 Sorghum cytosol 38.04 44.92
EES01639 Sorghum cytosol 37.56 44.35
EER94941 Sorghum cytosol, peroxisome, plastid 37.8 41.58
CDX99469 Canola nucleus 19.62 36.12
CDX78847 Canola cytosol 16.03 28.15
PGSC0003DMT400002031 Potato extracellular 8.85 23.12
PGSC0003DMT400054900 Potato extracellular, plasma membrane 8.13 21.25
Protein Annotations
MapMan:19.2.2.8.1.4.6EntrezGene:8079263UniProt:C5XKZ7EnsemblPlants:EES03683ProteinID:EES03683ProteinID:EES03683.1
InterPro:F-box-like_dom_sfGO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0006810
GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0009506GO:GO:0009719GO:GO:0009736
GO:GO:0009914GO:GO:0009987PANTHER:PTHR31215PANTHER:PTHR31215:SF7EnsemblPlantsGene:SORBI_3003G309900SUPFAM:SSF81383
UniParc:UPI0001A85610RefSeq:XP_002458563.1SEG:seg:::
Description
hypothetical protein
Coordinates
chr3:-:63818469..63821515
Molecular Weight (calculated)
44154.8 Da
IEP (calculated)
6.054
GRAVY (calculated)
-0.049
Length
418 amino acids
Sequence
(BLAST)
001: MELEAAPRQQ QQLEEEEEEV VGCTCGGGAE AADQFERLHD AVLLDVLNRI GDVKALGRCA LVSRRFHALV PLVDSVFVRV DCVIPDDPTP SAAAAAPGSA
101: PHQAPATAAR GRGGALAHMA RVLLGGIARP IHALGQILSP AAAAVSRRSD PPLPASPPAP VADVSHHSPS EVLRSFRELR RLHIELPTGE LGIDDGVLLK
201: WKADFGSTLG SCVILGASSV LSKPPTGSTT QAEPAAADST AAALDTSRET EEPGSLPDSL YTNGGLKLRV VWTISSLIAA SARHYLLHPI ICNHETLESL
301: DLTDADGQGV LTMDKRQLQE LRVRPVSPSG SSHRTLMPAL SMRLHYAPLI ELPGGTLLKG ATLVAIRPSE DALREGQGAG AAGPVGTCWI SEAFEEPYRT
401: AAKVLLKRRA YCLEMNSF
Best Arabidopsis Sequence Match ( AT5G46170.1 )
(BLAST)
001: MAVIIPRSDP PSRIHPEPPQ TLEIDHFDHL PDSILLLVFN KIGDVKALGR CCVVSRRFHS LVPQVDNVVV RVDCVISDDD SSSLSSIKSR SGSSAGSFSA
101: IFRLVVGGIV KPLQALGQFL GTKRSSSSCG GSGSSSSSLS ISGDDDGGEI EQGGVTHHSP TQVLKNFDEI RYLRIELPSG ELGIDDGVLL KWRAEFGSTL
201: DNCVILGASS VIPPNPMRVS QACDTTTVVE APGSGSDDNG SIPESFYTNG GLKLRVVWTI SSLIAASARH YLLQPIIAEH KTLDSLVLTD SDGQGVLCMN
301: RDQLEELRVK PLAASSASKR TLVPALNMRL WYAPTLELPD GTVLKGATLV AIRPSESKKE VSDISWVSSA FEEPYETAAK MLVKRRTYCL EMNSF
Arabidopsis Description
F-box protein At5g46170 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNK5]
SUBAcon: [plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.