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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:mitochondrion, plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr5P02540_001 Banana cytosol 71.77 71.34
GSMUA_Achr11P... Banana extracellular 15.92 69.74
Solyc02g070480.2.1 Tomato cytosol 37.54 65.1
CDX78848 Canola cytosol 18.62 63.92
GSMUA_Achr4P22940_001 Banana cytosol 71.47 63.81
GSMUA_Achr2P17340_001 Banana cytosol 64.56 60.39
GSMUA_Achr7P01170_001 Banana mitochondrion 69.37 56.48
GSMUA_Achr7P07910_001 Banana cytosol 64.86 56.4
Os01t0770400-01 Rice cytosol 63.06 53.03
KRH11156 Soybean cytosol, nucleus, vacuole 60.06 51.95
CDX77641 Canola cytosol 56.46 51.93
KRH21091 Soybean cytosol 59.76 51.42
CDY33458 Canola cytosol 55.56 51.39
CDX87738 Canola cytosol 57.36 51.21
PGSC0003DMT400054525 Potato cytosol 56.16 50.95
TraesCS3A01G296700.1 Wheat cytosol 61.26 50.87
TraesCS3B01G340400.1 Wheat cytosol 61.26 50.75
Bra022022.1-P Field mustard cytosol 56.46 50.67
CDY43956 Canola cytosol 56.46 50.4
Zm00001d043324_P001 Maize cytosol 60.36 50.12
TraesCS3D01G306000.1 Wheat cytosol 60.36 50.12
AT5G46170.1 Thale cress cytosol, plastid 59.16 49.87
Bra013303.1-P Field mustard cytosol 56.46 49.87
OQU78753 Sorghum cytosol 55.56 49.87
CDX99890 Canola cytosol, golgi, nucleus 54.95 49.86
AT4G18380.1 Thale cress cytosol 56.76 49.74
Bra025034.1-P Field mustard cytosol 55.56 49.47
Bra032364.1-P Field mustard cytosol, nucleus, vacuole 55.56 49.47
CDY26286 Canola cytosol, nucleus, vacuole 55.56 49.47
VIT_10s0003g03880.t01 Wine grape cytosol 59.16 49.37
Os05t0510400-02 Rice cytosol 60.66 49.03
PGSC0003DMT400049024 Potato cytosol 57.06 48.84
Zm00001d012644_P001 Maize cytosol 59.76 48.54
AT1G30200.2 Thale cress cytosol 54.35 47.76
EES03683 Sorghum cytosol 59.46 47.37
TraesCS1B01G342700.1 Wheat cytosol 58.26 46.75
Zm00001d000314_P001 Maize cytosol 57.66 46.6
EES01093 Sorghum cytosol 58.26 46.41
TraesCS1A01G329300.1 Wheat cytosol, mitochondrion 58.56 46.32
TraesCS1D01G331400.1 Wheat cytosol 58.86 45.9
KXG22318 Sorghum cytosol 58.56 45.88
Zm00001d010705_P001 Maize cytosol 56.46 45.63
Solyc08g048430.2.1 Tomato cytosol 42.64 43.56
GSMUA_Achr7P21580_001 Banana cytosol 45.65 43.06
HORVU3Hr1G075050.2 Barley plastid 60.66 42.17
GSMUA_Achr10P... Banana cytosol, nucleus, peroxisome 43.54 41.67
GSMUA_Achr3P18400_001 Banana cytosol 45.05 41.32
GSMUA_Achr10P... Banana cytosol 43.54 40.96
GSMUA_Achr6P32090_001 Banana cytosol 43.24 40.79
HORVU1Hr1G077600.2 Barley plastid 59.46 40.66
GSMUA_Achr10P... Banana cytosol 33.03 38.19
CDX99469 Canola nucleus 24.02 35.24
CDX78847 Canola cytosol 18.92 26.47
PGSC0003DMT400002031 Potato extracellular 11.41 23.75
PGSC0003DMT400054900 Potato extracellular, plasma membrane 10.51 21.88
GSMUA_Achr6P15980_001 Banana mitochondrion 44.44 19.84
Protein Annotations
EnsemblPlants:GSMUA_Achr4P31500_001EnsemblPlants:GSMUA_Achr4T31500_001EnsemblPlantsGene:GSMUA_Achr4G31500_001Gene3D:1.20.1280.50GO:GO:0003674GO:GO:0005488
GO:GO:0005515InterPro:F-box-like_dom_sfPANTHER:PTHR31215PANTHER:PTHR31215:SF7SEG:segSUPFAM:SSF81383
UniParc:UPI0002968842UniProt:M0STR2MapMan:19.2.2.8.1.4.6:::
Description
F-box protein At1g30200 [Source:GMGC_GENE;Acc:GSMUA_Achr4G31500_001]
Coordinates
chr4:+:28695585..28697802
Molecular Weight (calculated)
35835.8 Da
IEP (calculated)
6.314
GRAVY (calculated)
0.011
Length
333 amino acids
Sequence
(BLAST)
001: MSSSGALGEV DFEGFRTLCR APAVEVAAKE EEGIDHFDRL PDSVLLVIFN RIGDVKVLGR CCGVSRRFHA LAVLVDDVVV RVDCVISDGP QILSASSCTD
101: ATAVSAAAGK SASASPSEAS HHSPTEVLKN FKEVRRLRIE LPDGELGVDG GVLLKWRADF GSSIDSCVIL GASSAVSSLK RRVVWTISSL IAASARHYLL
201: HPIVANHETL ESLDLTDADG QGVLTMDRRQ LQELRTKPVT ASGSSQRTLL PALSMRLWYA HQLELPGGMV LKGATLLAIR PSEERTREAV GGAGGSFGFS
301: DGCWVSDAFE EPYRTAATML MKRRTYSLEM NSF
Best Arabidopsis Sequence Match ( AT1G30200.1 )
(BLAST)
001: MSYLLRSDPV SRIHPEPQSL TSFDHFDLLP DSLLLLIFDK VADVKDLGRC CIVSRRFHSL VPFVENVLVR VDCVISDDDS SSSDENHRFS LNTASISDAG
101: GAGGSFSALF RLVFAPIFKP FQMLGQILGP KRSSSSFDAS FSAINDEIGV THHSPTQVLK NFGEIRFLKI ELPTGELGIE DGILLKWRAD FGSTLDNCMI
201: LGASSVIQSN SVKNHENSVD EDNGNIPESF YTNGGLKLRV VWTISSLIAA SARHYLLQPI INEHKSLDRL VLSDADGQGV LCMNREQLEE LRVTPLSASS
301: ASKRTLVPAL NMRLWYAPEL DLPDGTVLKG ATLVAIRPSE SKKEVCDASW LSDAFEEPFG TVAKMLIKRR TYCLEMNSF
Arabidopsis Description
F-box protein At1g30200 [Source:UniProtKB/Swiss-Prot;Acc:Q9C534]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.