Factsheet for Zm00001d010705_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d000314_P001	Maize	cytosol	87.14	87.14
KXG22318	Sorghum	cytosol	82.77	80.24
Os05t0510400-02	Rice	cytosol	72.82	72.82
TraesCS1B01G342700.1	Wheat	cytosol	67.23	66.75
TraesCS1A01G329300.1	Wheat	cytosol, mitochondrion	66.99	65.56
TraesCS1D01G331400.1	Wheat	cytosol	67.72	65.34
Solyc02g070480.2.1	Tomato	cytosol	29.85	64.06
Zm00001d012644_P001	Maize	cytosol	60.44	60.73
Zm00001d043324_P001	Maize	cytosol	58.74	60.35
HORVU1Hr1G077600.2	Barley	plastid	70.39	59.55
GSMUA_Achr5P02540_001	Banana	cytosol	48.3	59.4
Bra022022.1-P	Field mustard	cytosol	52.67	58.49
GSMUA_Achr7P07910_001	Banana	cytosol	54.37	58.49
CDX87738	Canola	cytosol	52.67	58.18
CDY43956	Canola	cytosol	52.18	57.64
CDY33458	Canola	cytosol	50.24	57.5
CDX99890	Canola	cytosol, golgi, nucleus	51.21	57.49
CDX77641	Canola	cytosol	50.24	57.18
KRH11156	Soybean	cytosol, nucleus, vacuole	53.4	57.14
KRH21091	Soybean	cytosol	53.4	56.85
GSMUA_Achr2P17340_001	Banana	cytosol	49.03	56.74
GSMUA_Achr4P31500_001	Banana	cytosol	45.63	56.46
Bra025034.1-P	Field mustard	cytosol	51.21	56.42
Bra013303.1-P	Field mustard	cytosol	51.21	55.97
CDY26286	Canola	cytosol, nucleus, vacuole	50.73	55.88
Bra032364.1-P	Field mustard	cytosol, nucleus, vacuole	50.73	55.88
GSMUA_Achr4P22940_001	Banana	cytosol	50.49	55.76
AT1G30200.2	Thale cress	cytosol	51.21	55.67
CDX78848	Canola	cytosol	13.11	55.67
AT5G46170.1	Thale cress	cytosol, plastid	53.16	55.44
AT4G18380.1	Thale cress	cytosol	50.97	55.26
PGSC0003DMT400054525	Potato	cytosol	49.03	55.04
VIT_10s0003g03880.t01	Wine grape	cytosol	52.91	54.64
PGSC0003DMT400049024	Potato	cytosol	49.51	52.44
Solyc08g048430.2.1	Tomato	cytosol	40.53	51.23
GSMUA_Achr11P...	Banana	extracellular	9.22	50.0
Zm00001d006501_P001	Maize	cytosol	26.21	49.54
Zm00001d038537_P001	Maize	cytosol	40.05	46.61
GSMUA_Achr7P01170_001	Banana	mitochondrion	45.63	45.97
Zm00001d010640_P001	Maize	cytosol, peroxisome, plastid	39.32	45.76
Zm00001d043125_P001	Maize	cytosol	37.38	44.0
Zm00001d043016_P001	Maize	plastid	26.46	42.75
Zm00001d028957_P001	Maize	cytosol	33.5	39.66
Zm00001d047573_P001	Maize	plastid	38.84	36.78
Zm00001d006500_P001	Maize	cytosol	35.68	36.3
CDX99469	Canola	nucleus	19.9	36.12
CDX78847	Canola	cytosol	19.17	33.19
PGSC0003DMT400002031	Potato	extracellular	10.92	28.12
PGSC0003DMT400054900	Potato	extracellular, plasma membrane	8.74	22.5

Protein Annotations

EnsemblPlants:Zm00001d010705_P001	EnsemblPlants:Zm00001d010705_T001	EnsemblPlantsGene:Zm00001d010705	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:F-box-like_dom_sf	PANTHER:PTHR31215	PANTHER:PTHR31215:SF7	ProteinID:AQK94630.1	SEG:seg	SUPFAM:SSF81383
UniParc:UPI000221544F	UniProt:K7UX45	MapMan:19.2.2.8.1.4.6	:	:	:

Description

F-box domain containing protein

Coordinates

chr8:-:125143906..125145144

Molecular Weight (calculated)

44152.4 Da

IEP (calculated)

4.920

GRAVY (calculated)

-0.050

Length

412 amino acids

Sequence
(BLAST)

001: MSEDPACSRR SRCDLGGDER WLSGPAGDDH FDRLPDALLL VIFNRIGDVK ALGRCSLVSL RFHELVPLVD SVLVRVDCVI PDEPPSSSSP STPFSPTASV
101: RARGVFSQIA RIVLGGIVKP IQALGQILSP ANSASGFPAS SDSSPSSSSS SLPLPLADVS HHSPSEVLRS FKELRHLRIE LPAGELDMDD GVMLKWKADF
201: GSTLGSCVIL GASSASASAS VSPSSADSDS TSTAPSVDGG RTEPDECVDS GSIPESFYTN GGFKLRVVWT ISSLIAAAAR HYLLQPIIAD HKTLERLDLT
301: DADGQGVLTM DKCQLQELRV RPLSTSRGSH RTLMPELSMW LWYAPCIELP GGLVLNGATL VAIKPSEEGT WDTVWNGAAG AAWVLDAFEE PYRTAVRMLL
401: KQRTYSLEMN SF

Best Arabidopsis Sequence Match ( AT5G46170.1 )
(BLAST)

001: MAVIIPRSDP PSRIHPEPPQ TLEIDHFDHL PDSILLLVFN KIGDVKALGR CCVVSRRFHS LVPQVDNVVV RVDCVISDDD SSSLSSIKSR SGSSAGSFSA
101: IFRLVVGGIV KPLQALGQFL GTKRSSSSCG GSGSSSSSLS ISGDDDGGEI EQGGVTHHSP TQVLKNFDEI RYLRIELPSG ELGIDDGVLL KWRAEFGSTL
201: DNCVILGASS VIPPNPMRVS QACDTTTVVE APGSGSDDNG SIPESFYTNG GLKLRVVWTI SSLIAASARH YLLQPIIAEH KTLDSLVLTD SDGQGVLCMN
301: RDQLEELRVK PLAASSASKR TLVPALNMRL WYAPTLELPD GTVLKGATLV AIRPSESKKE VSDISWVSSA FEEPYETAAK MLVKRRTYCL EMNSF

Arabidopsis Description

F-box protein At5g46170 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNK5]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.