Factsheet for HORVU1Hr1G077600.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
MultiLoc:	cytosol
TargetP:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G342700.1	Wheat	cytosol	71.05	83.37
TraesCS1A01G329300.1	Wheat	cytosol, mitochondrion	71.87	83.14
TraesCS1D01G331400.1	Wheat	cytosol	69.2	78.92
Os05t0510400-02	Rice	cytosol	62.42	73.79
Zm00001d000314_P001	Maize	cytosol	59.75	70.63
Zm00001d010705_P001	Maize	cytosol	59.55	70.39
KXG22318	Sorghum	cytosol	57.49	65.88
Solyc02g070480.2.1	Tomato	cytosol	24.85	63.02
GSMUA_Achr2P17340_001	Banana	cytosol	45.17	61.8
GSMUA_Achr7P07910_001	Banana	cytosol	47.84	60.84
CDX78848	Canola	cytosol	11.91	59.79
GSMUA_Achr4P31500_001	Banana	cytosol	40.66	59.46
CDY33458	Canola	cytosol	43.74	59.17
GSMUA_Achr5P02540_001	Banana	cytosol	40.45	58.81
KRH11156	Soybean	cytosol, nucleus, vacuole	46.41	58.7
Bra022022.1-P	Field mustard	cytosol	44.35	58.22
GSMUA_Achr4P22940_001	Banana	cytosol	44.56	58.18
Bra025034.1-P	Field mustard	cytosol	44.56	58.02
CDX77641	Canola	cytosol	43.12	58.01
CDX87738	Canola	cytosol	44.35	57.91
Bra013303.1-P	Field mustard	cytosol	44.76	57.82
AT5G46170.1	Thale cress	cytosol, plastid	46.82	57.72
CDY43956	Canola	cytosol	44.15	57.64
KRH21091	Soybean	cytosol	45.79	57.62
VIT_10s0003g03880.t01	Wine grape	cytosol	47.02	57.39
AT4G18380.1	Thale cress	cytosol	44.56	57.11
CDX99890	Canola	cytosol, golgi, nucleus	42.51	56.4
Bra032364.1-P	Field mustard	cytosol, nucleus, vacuole	42.92	55.88
CDY26286	Canola	cytosol, nucleus, vacuole	42.92	55.88
HORVU3Hr1G075050.2	Barley	plastid	54.83	55.74
PGSC0003DMT400054525	Potato	cytosol	41.89	55.59
AT1G30200.2	Thale cress	cytosol	42.71	54.88
PGSC0003DMT400049024	Potato	cytosol	43.12	53.98
GSMUA_Achr11P...	Banana	extracellular	8.42	53.95
Solyc08g048430.2.1	Tomato	cytosol	35.11	52.45
GSMUA_Achr7P01170_001	Banana	mitochondrion	39.84	47.43
HORVU1Hr1G068570.1	Barley	cytosol	34.29	47.31
HORVU0Hr1G030450.1	Barley	cytosol	34.09	47.03
HORVU4Hr1G052070.1	Barley	cytosol	35.11	46.59
CDX99469	Canola	nucleus	18.07	38.77
CDX78847	Canola	cytosol	17.04	34.87
PGSC0003DMT400002031	Potato	extracellular	9.86	30.0
PGSC0003DMT400054900	Potato	extracellular, plasma membrane	7.6	23.12

Protein Annotations

EnsemblPlants:HORVU1Hr1G077600.2	EnsemblPlantsGene:HORVU1Hr1G077600	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:F-box-like_dom_sf	InterPro:F-box_dom	InterPro:IPR001810	InterPro:IPR032675	InterPro:LRR_dom_sf	PANTHER:PTHR31215
PANTHER:PTHR31215:SF7	PFAM:PF12937	SEG:seg	SUPFAM:SSF81383	UniParc:UPI000B47BF08	UniProt:A0A287GCA3
MapMan:19.2.2.8.1.4.6	:	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:-:517975531..517979750

Molecular Weight (calculated)

51379.0 Da

IEP (calculated)

7.913

GRAVY (calculated)

-0.132

Length

487 amino acids

Sequence
(BLAST)

001: TISEMHRGST AFSVSVSVSF PRPEPREERK TACKPSTSTH PRSPRGLPRP AFPPSHLPPD PVLGRSTMAE DAAAGARRXA RRWRGEEGQQ PHRLAAAAGA
101: PEDRFDGLPD PLLLLIFNRI GDVKALGRCA LVSRRFHALV PLVDSVLVRV DCVIPDDPAS SSPSSPTATA SARARGVFSQ IARMVIGGIV KPIQALGQIL
201: SHANSAADFP ASAASLSSFR RSSSLSSSSA PHADVSHHSP SEVLRSFKEL RSLRIELPAG ELGMDDGVLL KWKADFGSTL GSCVILGAAS ASASPSSAVK
301: DGCSTATPPP AAAADCGESD DSGSIPESFY TNGGLKLRVL WTISSLIAAS ARHYLLQPII SDHALLESLD LTDADGQGVL TMDKWQLQEL RVRPVSASGD
401: SHRTLMPALS MRLWYAPQIE LPGGTVLNGA TLVAIKPSEE AMRDAVGNGT AGSAGGSWVS DAFEEPYRTA VGVLLKRRMY SLEMNSF

Best Arabidopsis Sequence Match ( AT5G46170.1 )
(BLAST)

001: MAVIIPRSDP PSRIHPEPPQ TLEIDHFDHL PDSILLLVFN KIGDVKALGR CCVVSRRFHS LVPQVDNVVV RVDCVISDDD SSSLSSIKSR SGSSAGSFSA
101: IFRLVVGGIV KPLQALGQFL GTKRSSSSCG GSGSSSSSLS ISGDDDGGEI EQGGVTHHSP TQVLKNFDEI RYLRIELPSG ELGIDDGVLL KWRAEFGSTL
201: DNCVILGASS VIPPNPMRVS QACDTTTVVE APGSGSDDNG SIPESFYTNG GLKLRVVWTI SSLIAASARH YLLQPIIAEH KTLDSLVLTD SDGQGVLCMN
301: RDQLEELRVK PLAASSASKR TLVPALNMRL WYAPTLELPD GTVLKGATLV AIRPSESKKE VSDISWVSSA FEEPYETAAK MLVKRRTYCL EMNSF

Arabidopsis Description

F-box protein At5g46170 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNK5]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.