Factsheet for Os05t0510400-02

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plasma membrane 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d000314_P001	Maize	cytosol	73.3	73.3
TraesCS1B01G342700.1	Wheat	cytosol	73.79	73.25
Zm00001d010705_P001	Maize	cytosol	72.82	72.82
TraesCS1A01G329300.1	Wheat	cytosol, mitochondrion	74.27	72.68
TraesCS1D01G331400.1	Wheat	cytosol	73.06	70.49
KXG22318	Sorghum	cytosol	71.6	69.41
Solyc02g070480.2.1	Tomato	cytosol	31.31	67.19
Os01t0770400-01	Rice	cytosol	63.35	65.91
GSMUA_Achr5P02540_001	Banana	cytosol	50.97	62.69
HORVU1Hr1G077600.2	Barley	plastid	73.79	62.42
Bra022022.1-P	Field mustard	cytosol	55.34	61.46
CDX87738	Canola	cytosol	55.58	61.39
CDX77641	Canola	cytosol	53.64	61.05
GSMUA_Achr2P17340_001	Banana	cytosol	52.67	60.96
CDY43956	Canola	cytosol	55.1	60.86
GSMUA_Achr4P31500_001	Banana	cytosol	49.03	60.66
CDY33458	Canola	cytosol	52.91	60.56
GSMUA_Achr7P07910_001	Banana	cytosol	56.07	60.31
Bra025034.1-P	Field mustard	cytosol	54.61	60.16
KRH11156	Soybean	cytosol, nucleus, vacuole	56.07	60.0
CDX78848	Canola	cytosol	14.08	59.79
KRH21091	Soybean	cytosol	56.07	59.69
GSMUA_Achr4P22940_001	Banana	cytosol	53.4	58.98
VIT_10s0003g03880.t01	Wine grape	cytosol	57.04	58.9
AT5G46170.1	Thale cress	cytosol, plastid	55.58	57.97
GSMUA_Achr11P...	Banana	extracellular	10.68	57.89
PGSC0003DMT400054525	Potato	cytosol	51.46	57.77
AT4G18380.1	Thale cress	cytosol	53.16	57.63
Bra013303.1-P	Field mustard	cytosol	51.94	56.76
CDX99890	Canola	cytosol, golgi, nucleus	50.49	56.68
CDY26286	Canola	cytosol, nucleus, vacuole	51.21	56.42
Bra032364.1-P	Field mustard	cytosol, nucleus, vacuole	51.21	56.42
AT1G30200.2	Thale cress	cytosol	51.21	55.67
PGSC0003DMT400049024	Potato	cytosol	52.43	55.53
Solyc08g048430.2.1	Tomato	cytosol	42.72	53.99
GSMUA_Achr7P01170_001	Banana	mitochondrion	48.54	48.9
Os01t0812200-01	Rice	cytosol	41.75	48.73
Os03t0321300-01	Rice	cytosol	41.5	44.53
CDX99469	Canola	nucleus	21.36	38.77
Os05t0490300-01	Rice	mitochondrion	42.23	38.67
CDX78847	Canola	cytosol	19.42	33.61
PGSC0003DMT400002031	Potato	extracellular	11.65	30.0
PGSC0003DMT400054900	Potato	extracellular, plasma membrane	9.47	24.38

Protein Annotations

Gene3D:1.20.1280.50	MapMan:19.2.2.8.1.4.6	EntrezGene:4339280	ProteinID:AAT44135.1	EMBL:AK068685	ProteinID:BAF17923.1
ProteinID:BAS94834.1	ProteinID:EEE64319.1	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0006810	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0009506	GO:GO:0009719	GO:GO:0009736	GO:GO:0009914	GO:GO:0009987	InterPro:IPR001810
EnsemblPlantsGene:Os05g0510400	EnsemblPlants:Os05t0510400-02	PFAM:PF12937	PFscan:PS50181	PANTHER:PTHR31215	PANTHER:PTHR31215:SF7
UniProt:Q6L541	SUPFAM:SSF81383	UniParc:UPI00003A924A	RefSeq:XP_015637333.1	SEG:seg	:

Description

F-box protein 266Cyclin-like F-box domain containing protein. (Os05t0510400-01);Cyclin-like F-box domain containing protein. (Os05t0510400-02)

Coordinates

chr5:+:25283108..25286640

Molecular Weight (calculated)

43180.1 Da

IEP (calculated)

5.839

GRAVY (calculated)

-0.024

Length

412 amino acids

Sequence
(BLAST)

001: MAEDPAGSRR WRCDAGDEHG CWLSSSAGGG GDDHFDRLPD PLLLVIFNRI GDVKALGRCS LVSRRFHDLV PLVDSVLVRV DCVIPDDPAS SSSSSSSPSA
101: APSSPTASAR ARTVFSQIAR IVLGGIVKPI QALGQILSPA NSASVLAASV TSSPSSSSSS SSSSPPLPGD VSHHSPSEVL RSFKELRRLR IELPAGELSM
201: EEGVLLKWKA DFGSTLGSCV ILGASSAGKD GGAGAAPAVD CGESDETGSI PESFYTNGGL KLRVVWTISS LIAASARHYL LQPIIADHTT LESLDLTDAD
301: GQGVLTMDKW QLQELRVKPV SASGGSHRTL MPALSMRLWY APHIELPGGL VLNGATLVAI KPTEEATRDT VGSGIAGSAG GCWVSDAFEE PYRTAVGMLL
401: KRRTYSLEMN SF

Best Arabidopsis Sequence Match ( AT5G46170.1 )
(BLAST)

001: MAVIIPRSDP PSRIHPEPPQ TLEIDHFDHL PDSILLLVFN KIGDVKALGR CCVVSRRFHS LVPQVDNVVV RVDCVISDDD SSSLSSIKSR SGSSAGSFSA
101: IFRLVVGGIV KPLQALGQFL GTKRSSSSCG GSGSSSSSLS ISGDDDGGEI EQGGVTHHSP TQVLKNFDEI RYLRIELPSG ELGIDDGVLL KWRAEFGSTL
201: DNCVILGASS VIPPNPMRVS QACDTTTVVE APGSGSDDNG SIPESFYTNG GLKLRVVWTI SSLIAASARH YLLQPIIAEH KTLDSLVLTD SDGQGVLCMN
301: RDQLEELRVK PLAASSASKR TLVPALNMRL WYAPTLELPD GTVLKGATLV AIRPSESKKE VSDISWVSSA FEEPYETAAK MLVKRRTYCL EMNSF

Arabidopsis Description

F-box protein At5g46170 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNK5]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.