Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr11P... | Banana | extracellular | 39.18 | 50.0 |
| Bra013303.1-P | Field mustard | cytosol | 100.0 | 25.73 |
| AT4G18380.1 | Thale cress | cytosol | 97.94 | 25.0 |
| CDY33458 | Canola | cytosol | 89.69 | 24.17 |
| CDX77641 | Canola | cytosol | 89.69 | 24.03 |
| CDX87738 | Canola | cytosol | 88.66 | 23.06 |
| CDY43956 | Canola | cytosol | 86.6 | 22.52 |
| CDX99890 | Canola | cytosol, golgi, nucleus | 83.51 | 22.07 |
| CDY26286 | Canola | cytosol, nucleus, vacuole | 84.54 | 21.93 |
| VIT_10s0003g03880.t01 | Wine grape | cytosol | 89.69 | 21.8 |
| KRH11156 | Soybean | cytosol, nucleus, vacuole | 83.51 | 21.04 |
| KRH21091 | Soybean | cytosol | 83.51 | 20.93 |
| GSMUA_Achr4P31500_001 | Banana | cytosol | 63.92 | 18.62 |
| GSMUA_Achr2P17340_001 | Banana | cytosol | 65.98 | 17.98 |
| GSMUA_Achr5P02540_001 | Banana | cytosol | 58.76 | 17.01 |
| GSMUA_Achr7P07910_001 | Banana | cytosol | 64.95 | 16.45 |
| GSMUA_Achr4P22940_001 | Banana | cytosol | 61.86 | 16.09 |
| OQU78753 | Sorghum | cytosol | 60.82 | 15.9 |
| TraesCS3A01G296700.1 | Wheat | cytosol | 61.86 | 14.96 |
| TraesCS3D01G306000.1 | Wheat | cytosol | 61.86 | 14.96 |
| TraesCS3B01G340400.1 | Wheat | cytosol | 61.86 | 14.93 |
| Os01t0770400-01 | Rice | cytosol | 60.82 | 14.9 |
| Zm00001d012644_P001 | Maize | cytosol | 60.82 | 14.39 |
| Zm00001d043324_P001 | Maize | cytosol | 58.76 | 14.21 |
| GSMUA_Achr7P01170_001 | Banana | mitochondrion | 59.79 | 14.18 |
| EES03683 | Sorghum | cytosol | 60.82 | 14.11 |
| Os05t0510400-02 | Rice | cytosol | 59.79 | 14.08 |
| TraesCS1B01G342700.1 | Wheat | cytosol | 59.79 | 13.98 |
| EES01093 | Sorghum | cytosol | 59.79 | 13.88 |
| Zm00001d000314_P001 | Maize | cytosol | 58.76 | 13.84 |
| TraesCS1A01G329300.1 | Wheat | cytosol, mitochondrion | 59.79 | 13.78 |
| TraesCS1D01G331400.1 | Wheat | cytosol | 59.79 | 13.58 |
| Zm00001d010705_P001 | Maize | cytosol | 55.67 | 13.11 |
| KXG22318 | Sorghum | cytosol | 55.67 | 12.71 |
| HORVU3Hr1G075050.2 | Barley | plastid | 61.86 | 12.53 |
| HORVU1Hr1G077600.2 | Barley | plastid | 59.79 | 11.91 |
| CDY14629 | Canola | cytosol | 32.99 | 11.72 |
| CDY26850 | Canola | cytosol | 31.96 | 10.4 |
| CDY41488 | Canola | cytosol | 34.02 | 10.34 |
| CDX91668 | Canola | cytosol | 34.02 | 10.34 |
| CDY21348 | Canola | cytosol | 34.02 | 10.19 |
| CDX87476 | Canola | cytosol | 32.99 | 9.97 |
| CDX88418 | Canola | cytosol | 32.99 | 9.97 |
| CDY38235 | Canola | cytosol | 32.99 | 9.88 |
| CDY00435 | Canola | cytosol | 31.96 | 9.75 |
| CDX99469 | Canola | nucleus | 20.62 | 8.81 |
| CDY32130 | Canola | cytosol | 15.46 | 5.54 |
| CDY46634 | Canola | cytosol | 14.43 | 5.04 |
| Zm00001d006500_P001 | Maize | cytosol | 20.62 | 4.94 |
| GSMUA_Achr10P... | Banana | cytosol | 9.28 | 3.12 |
| CDX78847 | Canola | cytosol | 6.19 | 2.52 |
| PGSC0003DMT400054900 | Potato | extracellular, plasma membrane | 0.0 | 0.0 |
| PGSC0003DMT400002031 | Potato | extracellular | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX78848 | EnsemblPlantsGene:GSBRNA2T00131323001 | PANTHER:PTHR31215 | PANTHER:PTHR31215:SF2 | ProteinID:CDX78848 | ProteinID:CDX78848.1 |
| UniParc:UPI0004EE9D01 | MapMan:35.1 | : | : | : | : |
Description
BnaA01g09150D
Coordinates
chrLK031816:+:421578..422396
Molecular Weight (calculated)
10752.1 Da
IEP (calculated)
9.634
GRAVY (calculated)
-0.109
Length
97 amino acids
Sequence
(BLAST)
(BLAST)
1: MNRDQLEELR VKPLSASSAS KRTLVPALNM RLWYAPSLEL PDGTVLKGAT LVAIRPSESK KEVCDVSWVS SAFDGAYGVA AKMLVKRRTY CLEMNSF
001: MSYLLRSDPV SRIHPEPQSL TSFDHFDLLP DSLLLLIFDK VADVKDLGRC CIVSRRFHSL VPFVENVLVR VDCVISDDDS SSSDENHRFS LNTASISDAG
101: GAGGSFSALF RLVFAPIFKP FQMLGQILGP KRSSSSFDAS FSAINDEIGV THHSPTQVLK NFGEIRFLKI ELPTGELGIE DGILLKWRAD FGSTLDNCMI
201: LGASSVIQSN SVKNHENSVD EDNGNIPESF YTNGGLKLRV VWTISSLIAA SARHYLLQPI INEHKSLDRL VLSDADGQGV LCMNREQLEE LRVTPLSASS
301: ASKRTLVPAL NMRLWYAPEL DLPDGTVLKG ATLVAIRPSE SKKEVCDASW LSDAFEEPFG TVAKMLIKRR TYCLEMNSF
101: GAGGSFSALF RLVFAPIFKP FQMLGQILGP KRSSSSFDAS FSAINDEIGV THHSPTQVLK NFGEIRFLKI ELPTGELGIE DGILLKWRAD FGSTLDNCMI
201: LGASSVIQSN SVKNHENSVD EDNGNIPESF YTNGGLKLRV VWTISSLIAA SARHYLLQPI INEHKSLDRL VLSDADGQGV LCMNREQLEE LRVTPLSASS
301: ASKRTLVPAL NMRLWYAPEL DLPDGTVLKG ATLVAIRPSE SKKEVCDASW LSDAFEEPFG TVAKMLIKRR TYCLEMNSF
Arabidopsis Description
F-box protein At1g30200 [Source:UniProtKB/Swiss-Prot;Acc:Q9C534]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.