CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU78753	Sorghum	cytosol	87.08	98.11
EES03683	Sorghum	cytosol	94.74	94.74
Zm00001d012644_P001	Maize	cytosol	83.25	84.88
Zm00001d043324_P001	Maize	cytosol	79.67	83.04
Os01t0770400-01	Rice	cytosol	70.1	73.99
TraesCS3D01G306000.1	Wheat	cytosol	66.75	69.58
TraesCS3B01G340400.1	Wheat	cytosol	66.75	69.4
TraesCS3A01G296700.1	Wheat	cytosol	66.51	69.33
Solyc02g070480.2.1	Tomato	cytosol	27.99	60.94
CDX78848	Canola	cytosol	13.88	59.79
GSMUA_Achr4P31500_001	Banana	cytosol	46.41	58.26
GSMUA_Achr7P07910_001	Banana	cytosol	53.11	57.96
HORVU3Hr1G075050.2	Barley	plastid	65.79	57.41
GSMUA_Achr4P22940_001	Banana	cytosol	51.2	57.37
GSMUA_Achr2P17340_001	Banana	cytosol	48.56	57.02
GSMUA_Achr5P02540_001	Banana	cytosol	45.69	57.01
Bra022022.1-P	Field mustard	cytosol	49.52	55.8
CDY43956	Canola	cytosol	49.52	55.5
CDX87738	Canola	cytosol	49.52	55.5
KXG22318	Sorghum	cytosol	56.22	55.29
KRH21091	Soybean	cytosol	50.24	54.26
CDY33458	Canola	cytosol	46.65	54.17
KRH11156	Soybean	cytosol, nucleus, vacuole	49.76	54.03
AT4G18380.1	Thale cress	cytosol	48.8	53.68
VIT_10s0003g03880.t01	Wine grape	cytosol	51.2	53.63
Bra013303.1-P	Field mustard	cytosol	48.09	53.32
CDX77641	Canola	cytosol	45.69	52.76
GSMUA_Achr11P...	Banana	extracellular	9.57	52.63
AT5G46170.1	Thale cress	cytosol, plastid	49.52	52.41
PGSC0003DMT400054525	Potato	cytosol	45.93	52.32
Bra025034.1-P	Field mustard	cytosol	46.65	52.14
AT1G30200.2	Thale cress	cytosol	46.65	51.45
Bra032364.1-P	Field mustard	cytosol, nucleus, vacuole	45.93	51.34
CDY26286	Canola	cytosol, nucleus, vacuole	45.93	51.34
CDX99890	Canola	cytosol, golgi, nucleus	44.74	50.95
PGSC0003DMT400049024	Potato	cytosol	45.93	49.36
GSMUA_Achr7P01170_001	Banana	mitochondrion	47.37	48.41
Solyc08g048430.2.1	Tomato	cytosol	36.12	46.32
EES19721	Sorghum	cytosol	37.56	44.35
EES01639	Sorghum	cytosol	37.08	43.79
EER94941	Sorghum	cytosol, peroxisome, plastid	37.32	41.05
CDX99469	Canola	nucleus	19.62	36.12
CDX78847	Canola	cytosol	16.03	28.15
PGSC0003DMT400002031	Potato	extracellular	9.09	23.75
PGSC0003DMT400054900	Potato	extracellular, plasma membrane	8.13	21.25

Protein Annotations

MapMan:19.2.2.8.1.4.6	EntrezGene:8054901	UniProt:C5XR59	EnsemblPlants:EES01093	ProteinID:EES01093	ProteinID:EES01093.1
InterPro:F-box-like_dom_sf	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0006810
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009506	GO:GO:0009719	GO:GO:0009736
GO:GO:0009914	GO:GO:0009987	PANTHER:PTHR31215	PANTHER:PTHR31215:SF7	EnsemblPlantsGene:SORBI_3003G225000	SUPFAM:SSF81383
UniParc:UPI0001A84383	RefSeq:XP_002455973.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:56101227..56103450

Molecular Weight (calculated)

44073.7 Da

IEP (calculated)

6.191

GRAVY (calculated)

-0.061

Length

418 amino acids

Sequence
(BLAST)

001: MELEAAPRQQ QQQLEEEVEV VGCPCGGGSE AADQFERLHD AVLLDVLNRI GDVKALGRCA LVSRRFHALV PLVNSVFVRV DCVIPDDPTP SAAAAAPGSP
101: THQAPAPAAR GRGGALAHMA RVLLGGIAKP IHALAQILSP AAAAVSRRSD PPLPASPPAP VADVSHHSPS EVLRSFRELR RLHIELPTGE LGIDDGVLLK
201: WKADFGSTLG SCVILGASSV LSKPPTGSTT QAEPAAADST AAAPDTSRET EEPGSLPDSL YTNGGLKLRV VWTISSLIAA SARHYSLHPI ICNHETLESL
301: DLTDADGQGV LTMDKRQLQE LRVRPVSPSE SSHRTLMPAL SMRLHYAPLI ELPGGTLLKG ATLVAIRPSE DALSEGQGAG AAGPVGTCWI SEALEEPYRT
401: AAKVLLKRRA YCLEMNSF

Best Arabidopsis Sequence Match ( AT5G46170.1 )
(BLAST)

001: MAVIIPRSDP PSRIHPEPPQ TLEIDHFDHL PDSILLLVFN KIGDVKALGR CCVVSRRFHS LVPQVDNVVV RVDCVISDDD SSSLSSIKSR SGSSAGSFSA
101: IFRLVVGGIV KPLQALGQFL GTKRSSSSCG GSGSSSSSLS ISGDDDGGEI EQGGVTHHSP TQVLKNFDEI RYLRIELPSG ELGIDDGVLL KWRAEFGSTL
201: DNCVILGASS VIPPNPMRVS QACDTTTVVE APGSGSDDNG SIPESFYTNG GLKLRVVWTI SSLIAASARH YLLQPIIAEH KTLDSLVLTD SDGQGVLCMN
301: RDQLEELRVK PLAASSASKR TLVPALNMRL WYAPTLELPD GTVLKGATLV AIRPSESKKE VSDISWVSSA FEEPYETAAK MLVKRRTYCL EMNSF

Arabidopsis Description

F-box protein At5g46170 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNK5]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.