Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES01093 | Sorghum | cytosol | 98.11 | 87.08 |
| EES03683 | Sorghum | cytosol | 94.88 | 84.21 |
| Zm00001d012644_P001 | Maize | cytosol | 83.56 | 75.61 |
| Zm00001d043324_P001 | Maize | cytosol | 79.51 | 73.57 |
| Os01t0770400-01 | Rice | cytosol | 71.43 | 66.92 |
| TraesCS3D01G306000.1 | Wheat | cytosol | 70.35 | 65.09 |
| TraesCS3B01G340400.1 | Wheat | cytosol | 70.08 | 64.68 |
| TraesCS3A01G296700.1 | Wheat | cytosol | 69.81 | 64.59 |
| Solyc02g070480.2.1 | Tomato | cytosol | 31.54 | 60.94 |
| CDX78848 | Canola | cytosol | 15.9 | 60.82 |
| GSMUA_Achr4P31500_001 | Banana | cytosol | 49.87 | 55.56 |
| GSMUA_Achr11P... | Banana | extracellular | 11.05 | 53.95 |
| HORVU3Hr1G075050.2 | Barley | plastid | 69.0 | 53.44 |
| GSMUA_Achr2P17340_001 | Banana | cytosol | 51.21 | 53.37 |
| GSMUA_Achr5P02540_001 | Banana | cytosol | 47.98 | 53.13 |
| GSMUA_Achr7P07910_001 | Banana | cytosol | 54.45 | 52.74 |
| GSMUA_Achr4P22940_001 | Banana | cytosol | 52.83 | 52.55 |
| Bra022022.1-P | Field mustard | cytosol | 52.29 | 52.29 |
| CDY43956 | Canola | cytosol | 52.29 | 52.01 |
| CDX87738 | Canola | cytosol | 52.29 | 52.01 |
| KXG22318 | Sorghum | cytosol | 59.03 | 51.53 |
| Bra013303.1-P | Field mustard | cytosol | 51.48 | 50.66 |
| KRH11156 | Soybean | cytosol, nucleus, vacuole | 52.56 | 50.65 |
| KRH21091 | Soybean | cytosol | 52.83 | 50.65 |
| CDY33458 | Canola | cytosol | 49.06 | 50.56 |
| AT4G18380.1 | Thale cress | cytosol | 51.75 | 50.53 |
| VIT_10s0003g03880.t01 | Wine grape | cytosol | 53.37 | 49.62 |
| PGSC0003DMT400054525 | Potato | cytosol | 48.79 | 49.32 |
| CDX77641 | Canola | cytosol | 47.98 | 49.17 |
| AT5G46170.1 | Thale cress | cytosol, plastid | 52.29 | 49.11 |
| CDY26286 | Canola | cytosol, nucleus, vacuole | 49.06 | 48.66 |
| Bra025034.1-P | Field mustard | cytosol | 49.06 | 48.66 |
| Bra032364.1-P | Field mustard | cytosol, nucleus, vacuole | 49.06 | 48.66 |
| AT1G30200.2 | Thale cress | cytosol | 49.6 | 48.55 |
| CDX99890 | Canola | cytosol, golgi, nucleus | 47.98 | 48.5 |
| PGSC0003DMT400049024 | Potato | cytosol | 48.79 | 46.53 |
| GSMUA_Achr7P01170_001 | Banana | mitochondrion | 49.6 | 44.99 |
| Solyc08g048430.2.1 | Tomato | cytosol | 37.74 | 42.94 |
| EES19721 | Sorghum | cytosol | 40.16 | 42.09 |
| EES01639 | Sorghum | cytosol | 38.81 | 40.68 |
| EER94941 | Sorghum | cytosol, peroxisome, plastid | 39.08 | 38.16 |
| CDX99469 | Canola | nucleus | 18.87 | 30.84 |
| CDX78847 | Canola | cytosol | 15.09 | 23.53 |
| PGSC0003DMT400002031 | Potato | extracellular | 9.43 | 21.88 |
| PGSC0003DMT400054900 | Potato | extracellular, plasma membrane | 8.36 | 19.38 |
Protein Annotations
| EnsemblPlants:OQU78753 | EnsemblPlantsGene:SORBI_3008G042000 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:F-box-like_dom_sf |
| PANTHER:PTHR31215 | PANTHER:PTHR31215:SF7 | ProteinID:OQU78753 | ProteinID:OQU78753.1 | SEG:seg | SUPFAM:SSF81383 |
| UniParc:UPI000B8BAC1E | UniProt:A0A1Z5R4P9 | MapMan:19.2.2.8.1.4.6 | : | : | : |
Description
hypothetical protein
Coordinates
chr8:-:4103820..4105561
Molecular Weight (calculated)
39738.5 Da
IEP (calculated)
5.755
GRAVY (calculated)
-0.093
Length
371 amino acids
Sequence
(BLAST)
(BLAST)
001: MELEAAPRQQ QQQLEEEEEV VGCPCGGGSE AADQFERLHD AVLLDVLHRI GDVKALGRCA LVSRRFHALV PLVNSVFVRV NCPIHALAQI LSPAAAAVSR
101: RSDPPLPASP PAPVADVSHH PPSEVLRSFR ELRCLHIELP TGELGIDDGV LLKWKADFGS TLGSCVILGA SSVLSKPPTG STTQAEPAAA DSTAAAPDTS
201: RETEEPGSLP DSLYTNGGLK LRVVWTISSL IAASARHYSL HPIICNHETL ESLDLTDADG QGVLTMDKRQ LQELRVRPVS PSESSHRTLM PALSMRLHYA
301: PLIELPGGTL LKGATLVAIR PSEDALREGQ GAGAAGPVGT CWISEAFEEP YRTAAKVLLK RRAYCLEMNS F
101: RSDPPLPASP PAPVADVSHH PPSEVLRSFR ELRCLHIELP TGELGIDDGV LLKWKADFGS TLGSCVILGA SSVLSKPPTG STTQAEPAAA DSTAAAPDTS
201: RETEEPGSLP DSLYTNGGLK LRVVWTISSL IAASARHYSL HPIICNHETL ESLDLTDADG QGVLTMDKRQ LQELRVRPVS PSESSHRTLM PALSMRLHYA
301: PLIELPGGTL LKGATLVAIR PSEDALREGQ GAGAAGPVGT CWISEAFEEP YRTAAKVLLK RRAYCLEMNS F
001: MAIILRSSDP LLSRIHPEPQ EIDHFDNLPD SILLLIFNNI GDVKALGRCS VVSKRFHSLI PQVENVFVRV DCVISDDDSS SLLSDKPRSA SAASPFSAIF
101: RLVFKPLQAL GQFLKRSGSS SLPSGSSPSS LLISGGDDGE IEQGGVTHHS PTQVLKNFDE IKFLKIELPS GELGIDDGVL LKWRAEFGST LENCVILGAS
201: SVIPPTNSDK TEASSAPVAA VEDNGSIPES FYTNGGLKLR VVWTISSLIA ASARHYLLQP IIAEHKTLDS LVLTDVDGQG VLCMNRDQLE ELRVKPLSAS
301: SASKRTLVPA LNMRLWYAPS LELPDGTVLK GATLVAIRPS ESKKEVCDVS WVSSAFDEPY GVAAKMLVKR RTYCLEMNSF
101: RLVFKPLQAL GQFLKRSGSS SLPSGSSPSS LLISGGDDGE IEQGGVTHHS PTQVLKNFDE IKFLKIELPS GELGIDDGVL LKWRAEFGST LENCVILGAS
201: SVIPPTNSDK TEASSAPVAA VEDNGSIPES FYTNGGLKLR VVWTISSLIA ASARHYLLQP IIAEHKTLDS LVLTDVDGQG VLCMNRDQLE ELRVKPLSAS
301: SASKRTLVPA LNMRLWYAPS LELPDGTVLK GATLVAIRPS ESKKEVCDVS WVSSAFDEPY GVAAKMLVKR RTYCLEMNSF
Arabidopsis Description
F-box protein At4g18380 [Source:UniProtKB/Swiss-Prot;Acc:O49508]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.