Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- plastid 2
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX78848 | Canola | cytosol | 50.0 | 39.18 |
| Solyc02g070480.2.1 | Tomato | cytosol | 50.0 | 19.79 |
| GSMUA_Achr4P22940_001 | Banana | cytosol | 80.26 | 16.35 |
| GSMUA_Achr4P31500_001 | Banana | cytosol | 69.74 | 15.92 |
| GSMUA_Achr5P02540_001 | Banana | cytosol | 60.53 | 13.73 |
| GSMUA_Achr7P01170_001 | Banana | mitochondrion | 64.47 | 11.98 |
| GSMUA_Achr2P17340_001 | Banana | cytosol | 55.26 | 11.8 |
| GSMUA_Achr7P07910_001 | Banana | cytosol | 59.21 | 11.75 |
| Bra022022.1-P | Field mustard | cytosol | 53.95 | 11.05 |
| OQU78753 | Sorghum | cytosol | 53.95 | 11.05 |
| CDX87738 | Canola | cytosol | 53.95 | 10.99 |
| CDY43956 | Canola | cytosol | 53.95 | 10.99 |
| KRH11156 | Soybean | cytosol, nucleus, vacuole | 55.26 | 10.91 |
| KRH21091 | Soybean | cytosol | 55.26 | 10.85 |
| VIT_10s0003g03880.t01 | Wine grape | cytosol | 56.58 | 10.78 |
| CDX77641 | Canola | cytosol | 51.32 | 10.77 |
| Os05t0510400-02 | Rice | cytosol | 57.89 | 10.68 |
| AT5G46170.1 | Thale cress | cytosol, plastid | 55.26 | 10.63 |
| CDX99890 | Canola | cytosol, golgi, nucleus | 51.32 | 10.63 |
| CDY33458 | Canola | cytosol | 50.0 | 10.56 |
| AT4G18380.1 | Thale cress | cytosol | 52.63 | 10.53 |
| Bra032364.1-P | Field mustard | cytosol, nucleus, vacuole | 51.32 | 10.43 |
| CDY26286 | Canola | cytosol, nucleus, vacuole | 51.32 | 10.43 |
| PGSC0003DMT400054525 | Potato | cytosol | 50.0 | 10.35 |
| AT1G30200.2 | Thale cress | cytosol | 51.32 | 10.29 |
| PGSC0003DMT400049024 | Potato | cytosol | 52.63 | 10.28 |
| Zm00001d043324_P001 | Maize | cytosol | 53.95 | 10.22 |
| Zm00001d000314_P001 | Maize | cytosol | 55.26 | 10.19 |
| Bra025034.1-P | Field mustard | cytosol | 50.0 | 10.16 |
| Os01t0770400-01 | Rice | cytosol | 52.63 | 10.1 |
| Bra013303.1-P | Field mustard | cytosol | 50.0 | 10.08 |
| EES03683 | Sorghum | cytosol | 53.95 | 9.81 |
| Zm00001d012644_P001 | Maize | cytosol | 52.63 | 9.76 |
| TraesCS3A01G296700.1 | Wheat | cytosol | 51.32 | 9.73 |
| TraesCS3D01G306000.1 | Wheat | cytosol | 51.32 | 9.73 |
| TraesCS3B01G340400.1 | Wheat | cytosol | 51.32 | 9.7 |
| TraesCS1D01G331400.1 | Wheat | cytosol | 53.95 | 9.6 |
| EES01093 | Sorghum | cytosol | 52.63 | 9.57 |
| TraesCS1B01G342700.1 | Wheat | cytosol | 51.32 | 9.4 |
| TraesCS1A01G329300.1 | Wheat | cytosol, mitochondrion | 51.32 | 9.26 |
| Zm00001d010705_P001 | Maize | cytosol | 50.0 | 9.22 |
| GSMUA_Achr10P... | Banana | cytosol | 42.11 | 9.04 |
| KXG22318 | Sorghum | cytosol | 50.0 | 8.94 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, peroxisome | 40.79 | 8.91 |
| GSMUA_Achr3P18400_001 | Banana | cytosol | 40.79 | 8.54 |
| HORVU1Hr1G077600.2 | Barley | plastid | 53.95 | 8.42 |
| CDX99469 | Canola | nucleus | 25.0 | 8.37 |
| HORVU3Hr1G075050.2 | Barley | plastid | 52.63 | 8.35 |
| GSMUA_Achr6P32090_001 | Banana | cytosol | 38.16 | 8.22 |
| GSMUA_Achr7P21580_001 | Banana | cytosol | 36.84 | 7.93 |
| GSMUA_Achr6P15980_001 | Banana | mitochondrion | 42.11 | 4.29 |
| CDX78847 | Canola | cytosol | 10.53 | 3.36 |
| GSMUA_Achr10P... | Banana | cytosol | 5.26 | 1.39 |
| Solyc08g048430.2.1 | Tomato | cytosol | 5.26 | 1.23 |
| PGSC0003DMT400054900 | Potato | extracellular, plasma membrane | 0.0 | 0.0 |
| PGSC0003DMT400002031 | Potato | extracellular | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr11P26370_001 | EnsemblPlants:GSMUA_Achr11T26370_001 | EnsemblPlantsGene:GSMUA_Achr11G26370_001 | PANTHER:PTHR31215 | PANTHER:PTHR31215:SF2 | UniParc:UPI00029686BC |
| UniProt:M0RVL7 | MapMan:35.1 | : | : | : | : |
Description
F-box protein At5g46170 [Source:GMGC_GENE;Acc:GSMUA_Achr11G26370_001]
Coordinates
chr11:-:25214857..25215087
Molecular Weight (calculated)
8760.7 Da
IEP (calculated)
4.987
GRAVY (calculated)
-0.054
Length
76 amino acids
Sequence
(BLAST)
(BLAST)
1: MRLWYAWQLE LPDGMLLRGV TLLAIKPSEE WTTGAVDGFL VHLDGCKVSD AFEEPYRTAA KMLMNKRTYC IEMNSF
001: MAVIIPRSDP PSRIHPEPPQ TLEIDHFDHL PDSILLLVFN KIGDVKALGR CCVVSRRFHS LVPQVDNVVV RVDCVISDDD SSSLSSIKSR SGSSAGSFSA
101: IFRLVVGGIV KPLQALGQFL GTKRSSSSCG GSGSSSSSLS ISGDDDGGEI EQGGVTHHSP TQVLKNFDEI RYLRIELPSG ELGIDDGVLL KWRAEFGSTL
201: DNCVILGASS VIPPNPMRVS QACDTTTVVE APGSGSDDNG SIPESFYTNG GLKLRVVWTI SSLIAASARH YLLQPIIAEH KTLDSLVLTD SDGQGVLCMN
301: RDQLEELRVK PLAASSASKR TLVPALNMRL WYAPTLELPD GTVLKGATLV AIRPSESKKE VSDISWVSSA FEEPYETAAK MLVKRRTYCL EMNSF
101: IFRLVVGGIV KPLQALGQFL GTKRSSSSCG GSGSSSSSLS ISGDDDGGEI EQGGVTHHSP TQVLKNFDEI RYLRIELPSG ELGIDDGVLL KWRAEFGSTL
201: DNCVILGASS VIPPNPMRVS QACDTTTVVE APGSGSDDNG SIPESFYTNG GLKLRVVWTI SSLIAASARH YLLQPIIAEH KTLDSLVLTD SDGQGVLCMN
301: RDQLEELRVK PLAASSASKR TLVPALNMRL WYAPTLELPD GTVLKGATLV AIRPSESKKE VSDISWVSSA FEEPYETAAK MLVKRRTYCL EMNSF
Arabidopsis Description
F-box protein At5g46170 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNK5]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.