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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • peroxisome 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3B01G340400.1 Wheat cytosol 96.51 96.27
TraesCS3A01G296700.1 Wheat cytosol 95.76 95.76
Os01t0770400-01 Rice cytosol 78.55 79.55
HORVU3Hr1G075050.2 Barley plastid 88.53 74.11
Zm00001d043324_P001 Maize cytosol 71.07 71.07
OQU78753 Sorghum cytosol 65.09 70.35
EES03683 Sorghum cytosol 72.07 69.14
Zm00001d012644_P001 Maize cytosol 70.07 68.54
EES01093 Sorghum cytosol 69.58 66.75
Solyc02g070480.2.1 Tomato cytosol 31.17 65.1
CDX78848 Canola cytosol 14.96 61.86
TraesCS1D01G331400.1 Wheat cytosol 65.09 61.12
GSMUA_Achr4P31500_001 Banana cytosol 50.12 60.36
GSMUA_Achr2P17340_001 Banana cytosol 52.62 59.27
GSMUA_Achr5P02540_001 Banana cytosol 49.38 59.1
GSMUA_Achr7P07910_001 Banana cytosol 56.11 58.75
Bra022022.1-P Field mustard cytosol 53.87 58.22
CDX87738 Canola cytosol 54.11 58.18
CDY43956 Canola cytosol 53.87 57.91
KRH11156 Soybean cytosol, nucleus, vacuole 55.11 57.4
GSMUA_Achr4P22940_001 Banana cytosol 53.37 57.37
CDY33458 Canola cytosol 51.12 56.94
VIT_10s0003g03880.t01 Wine grape cytosol 56.11 56.39
KRH21091 Soybean cytosol 54.36 56.33
AT5G46170.1 Thale cress cytosol, plastid 55.36 56.2
AT4G18380.1 Thale cress cytosol 53.12 56.05
Bra013303.1-P Field mustard cytosol 52.62 55.97
CDX77641 Canola cytosol 50.37 55.8
CDY26286 Canola cytosol, nucleus, vacuole 51.12 54.81
Bra025034.1-P Field mustard cytosol 51.12 54.81
Bra032364.1-P Field mustard cytosol, nucleus, vacuole 51.12 54.81
PGSC0003DMT400054525 Potato cytosol 50.12 54.77
AT1G30200.2 Thale cress cytosol 51.62 54.62
CDX99890 Canola cytosol, golgi, nucleus 49.88 54.5
PGSC0003DMT400049024 Potato cytosol 50.12 51.67
GSMUA_Achr11P... Banana extracellular 9.73 51.32
Solyc08g048430.2.1 Tomato cytosol 41.4 50.92
GSMUA_Achr7P01170_001 Banana mitochondrion 49.13 48.17
TraesCS1D01G307200.1 Wheat cytosol 42.64 48.03
TraesCS3D01G329900.1 Wheat cytosol 42.39 47.75
TraesCS3D01G518800.1 Wheat cytosol 36.41 46.06
TraesCS4D01G178800.1 Wheat cytosol, peroxisome, plastid 38.15 41.58
CDX99469 Canola nucleus 20.95 37.0
CDX78847 Canola cytosol 18.2 30.67
PGSC0003DMT400002031 Potato extracellular 9.73 24.38
PGSC0003DMT400054900 Potato extracellular, plasma membrane 8.23 20.62
Protein Annotations
EnsemblPlants:TraesCS3D01G306000.1EnsemblPlantsGene:TraesCS3D01G306000Gene3D:1.20.1280.50GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:F-box-like_dom_sfInterPro:F-box_domInterPro:IPR001810PANTHER:PTHR31215PANTHER:PTHR31215:SF7PFAM:PF12937
PFscan:PS50181SEG:segSUPFAM:SSF81383MapMan:19.2.2.8.1.4.6::
Description
No Description!
Coordinates
chr3D:-:419880339..419881717
Molecular Weight (calculated)
42628.1 Da
IEP (calculated)
5.292
GRAVY (calculated)
-0.008
Length
401 amino acids
Sequence
(BLAST)
001: MEEGREGWPC AAAAAGEAVA EEGEEDQFDR LPDAVLLDVF NRIGDVKALG RCALVSRRFH GLVPLVDSVF VRVDCVIPDE PAPASAGSPQ AAAPSRGRGA
101: LAHIARLVLG GIVRPIQALG QILSPTLAIV SRRSVAPPPA SPPPPAGDIS HHSPSEVLRS FKELRSLRIE LPTGELGIDD GVLLKWKADF GSTLGSCVIL
201: GASSVSSKPL LPTMSSPDAA DSEAASLDDN REPEELASIP ESLHTNGGLK LRVVWTISSL IAASARHYLL QPIIADHEML DSLNLTDADG QGVLTMDKKQ
301: LQELRVRPVS VSGNSHRTLM PALIMRLWYA PHIELPGGVL LKGATLVAIR PSDDVLREGG GVEAAGPAGA SWISDAFEEP YRTAAKVLFK RRTYSLEMNS
401: F
Best Arabidopsis Sequence Match ( AT5G46170.1 )
(BLAST)
001: MAVIIPRSDP PSRIHPEPPQ TLEIDHFDHL PDSILLLVFN KIGDVKALGR CCVVSRRFHS LVPQVDNVVV RVDCVISDDD SSSLSSIKSR SGSSAGSFSA
101: IFRLVVGGIV KPLQALGQFL GTKRSSSSCG GSGSSSSSLS ISGDDDGGEI EQGGVTHHSP TQVLKNFDEI RYLRIELPSG ELGIDDGVLL KWRAEFGSTL
201: DNCVILGASS VIPPNPMRVS QACDTTTVVE APGSGSDDNG SIPESFYTNG GLKLRVVWTI SSLIAASARH YLLQPIIAEH KTLDSLVLTD SDGQGVLCMN
301: RDQLEELRVK PLAASSASKR TLVPALNMRL WYAPTLELPD GTVLKGATLV AIRPSESKKE VSDISWVSSA FEEPYETAAK MLVKRRTYCL EMNSF
Arabidopsis Description
F-box protein At5g46170 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNK5]
SUBAcon: [plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.