Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY00435 | Canola | cytosol | 88.85 | 77.67 |
| CDX91668 | Canola | cytosol | 70.5 | 61.44 |
| CDY41488 | Canola | cytosol | 69.78 | 60.81 |
| CDY38235 | Canola | cytosol | 69.42 | 59.57 |
| CDY21348 | Canola | cytosol | 68.35 | 58.64 |
| AT1G22220.1 | Thale cress | cytosol | 63.67 | 56.37 |
| CDY26850 | Canola | cytosol | 49.28 | 45.97 |
| CDY14629 | Canola | cytosol | 43.53 | 44.32 |
| CDX88418 | Canola | cytosol | 51.08 | 44.24 |
| CDX87476 | Canola | cytosol | 50.72 | 43.93 |
| CDY32130 | Canola | cytosol | 42.45 | 43.54 |
| VIT_18s0001g05310.t01 | Wine grape | cytosol | 43.53 | 40.33 |
| Solyc04g072930.1.1 | Tomato | cytosol | 42.81 | 35.0 |
| PGSC0003DMT400024512 | Potato | cytosol | 42.45 | 34.71 |
| GSMUA_Achr7P21580_001 | Banana | cytosol | 39.93 | 31.44 |
| Os01t0812200-01 | Rice | cytosol | 38.49 | 30.31 |
| Zm00001d006501_P001 | Maize | cytosol | 23.74 | 30.28 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, peroxisome | 37.77 | 30.17 |
| TraesCS3D01G329900.1 | Wheat | cytosol | 38.49 | 30.06 |
| TraesCS3B01G368000.1 | Wheat | cytosol | 37.77 | 29.66 |
| TraesCS3A01G336900.1 | Wheat | cytosol, peroxisome, plastid | 38.13 | 29.53 |
| HORVU0Hr1G030450.1 | Barley | cytosol | 37.41 | 29.46 |
| HORVU1Hr1G068570.1 | Barley | cytosol | 37.41 | 29.46 |
| GSMUA_Achr10P... | Banana | cytosol | 37.41 | 29.38 |
| EES01639 | Sorghum | cytosol | 37.05 | 29.1 |
| TraesCS1A01G307800.1 | Wheat | cytosol | 37.05 | 28.93 |
| TraesCS1B01G318500.1 | Wheat | cytosol | 37.05 | 28.93 |
| TraesCS1D01G307200.1 | Wheat | cytosol | 36.69 | 28.65 |
| Zm00001d043125_P001 | Maize | cytosol | 35.97 | 28.57 |
| Zm00001d038537_P001 | Maize | cytosol | 36.33 | 28.53 |
| TraesCS3D01G518800.1 | Wheat | cytosol | 32.01 | 28.08 |
| EES19721 | Sorghum | cytosol | 35.61 | 27.97 |
| Zm00001d010640_P001 | Maize | cytosol, peroxisome, plastid | 35.25 | 27.68 |
| GSMUA_Achr3P18400_001 | Banana | cytosol | 35.97 | 27.55 |
| CDY33458 | Canola | cytosol | 34.53 | 26.67 |
| EER94941 | Sorghum | cytosol, peroxisome, plastid | 35.97 | 26.32 |
| Os03t0321300-01 | Rice | cytosol | 36.33 | 26.3 |
| TraesCS4A01G127600.1 | Wheat | cytosol, peroxisome, plastid | 34.89 | 26.15 |
| CDX77641 | Canola | cytosol | 33.81 | 25.97 |
| HORVU4Hr1G052070.1 | Barley | cytosol | 34.17 | 25.89 |
| Zm00001d043016_P001 | Maize | plastid | 23.74 | 25.88 |
| CDX99890 | Canola | cytosol, golgi, nucleus | 33.81 | 25.61 |
| TraesCS4B01G177100.1 | Wheat | cytosol | 34.17 | 25.61 |
| CDX87738 | Canola | cytosol | 34.17 | 25.47 |
| CDY26286 | Canola | cytosol, nucleus, vacuole | 34.17 | 25.4 |
| TraesCS4D01G178800.1 | Wheat | cytosol, peroxisome, plastid | 33.45 | 25.27 |
| GSMUA_Achr6P32090_001 | Banana | cytosol | 32.01 | 25.21 |
| CDY43956 | Canola | cytosol | 33.81 | 25.2 |
| Zm00001d028957_P001 | Maize | cytosol | 30.94 | 24.71 |
| Os05t0490300-01 | Rice | mitochondrion | 37.77 | 23.33 |
| Zm00001d047573_P001 | Maize | plastid | 36.33 | 23.22 |
| CDX99469 | Canola | nucleus | 17.27 | 21.15 |
| CDX78847 | Canola | cytosol | 17.27 | 20.17 |
| CDX78848 | Canola | cytosol | 5.04 | 14.43 |
| GSMUA_Achr6P15980_001 | Banana | mitochondrion | 36.33 | 13.54 |
Protein Annotations
| EnsemblPlants:CDY46634 | EnsemblPlantsGene:GSBRNA2T00085916001 | Gene3D:3.80.10.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:F-box-like_dom_sf | InterPro:F-box_dom | InterPro:IPR001810 | InterPro:IPR032675 | InterPro:LRR_dom_sf | PANTHER:PTHR31215 |
| PFAM:PF12937 | PFscan:PS50181 | ProteinID:CDY46634 | ProteinID:CDY46634.1 | SEG:seg | SMART:SM00256 |
| SUPFAM:SSF81383 | UniParc:UPI0004EE0FD6 | UniProt:A0A078IBC0 | MapMan:19.2.2.8.1.4.6 | : | : |
Description
BnaA07g10620DBnaA07g10620D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IBC0]
Coordinates
chrLK032680:+:31137..32093
Molecular Weight (calculated)
30659.9 Da
IEP (calculated)
7.458
GRAVY (calculated)
-0.123
Length
278 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVFDGLPDA IVVDILNKVV DVKTLHRCSS VCKRFNSLVP QSESLFFRLD QDVTTESRPD SPVSNIFQSL VKSFQGFLSL FSKPAKPIRF TNLSPNIPSK
101: ILSRFDRIKN LEVELPGGDV SLEKGAAVKW KAEFGKTLKT CVVVAFRSAS TVSSSPPDGE SDAIGLETRV VWTISSLMAA STRHFLMSEV VKEHKEMESL
201: VMHDVGGEGT VVMGTEGLRE FRKTEEARGG EADERVVKNR RSVVPKLATE AFAGNCMYGE AVVALLKREK INLEINSF
101: ILSRFDRIKN LEVELPGGDV SLEKGAAVKW KAEFGKTLKT CVVVAFRSAS TVSSSPPDGE SDAIGLETRV VWTISSLMAA STRHFLMSEV VKEHKEMESL
201: VMHDVGGEGT VVMGTEGLRE FRKTEEARGG EADERVVKNR RSVVPKLATE AFAGNCMYGE AVVALLKREK INLEINSF
001: MDVFDGLPDP IIVDILNKVG DVKTLLRCSS LSKRFNSLVP QSESLTLRLD HSVSDSPVVT SIFRSLFNGL VSLLSKPAKP ITITTLSPSL PFKILSRFDR
101: IRNLDVELPG GDVKLEKGAA VKWKAEFGKT LKSCVIVAFR SAGTVSSPVA VEGESDAEFV TGLKTRVVWT ISALMAASSR HYLMREVVKE HEEIESLVMR
201: DKEREGTVVM NEEGLKELRN TEARVEDEER VVKNKRSVVP SVRMSMRHAP SLKLKSGICL ESATLVIVRP SGADFEVGDD AELATEAFVG DCMYGEAVVA
301: LLKCKKNALE MNSF
101: IRNLDVELPG GDVKLEKGAA VKWKAEFGKT LKSCVIVAFR SAGTVSSPVA VEGESDAEFV TGLKTRVVWT ISALMAASSR HYLMREVVKE HEEIESLVMR
201: DKEREGTVVM NEEGLKELRN TEARVEDEER VVKNKRSVVP SVRMSMRHAP SLKLKSGICL ESATLVIVRP SGADFEVGDD AELATEAFVG DCMYGEAVVA
301: LLKCKKNALE MNSF
Arabidopsis Description
AUF2 [Source:UniProtKB/TrEMBL;Acc:A0A178W7K5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.