Skip to main content
crop-pal logo
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 1
  • cytosol 3
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX74917 Canola cytosol 93.1 93.1
CDY05037 Canola nucleus 9.48 45.83
CDY28882 Canola cytosol, plastid 22.41 45.09
CDX84860 Canola cytosol 43.68 43.06
CDX84843 Canola cytosol 32.47 42.97
CDY24008 Canola cytosol 15.8 42.31
CDY56521 Canola cytosol, plastid 43.68 41.64
CDY02036 Canola cytosol 35.06 41.64
CDX84859 Canola cytosol 32.76 41.61
CDY54214 Canola cytosol 42.24 41.29
CDX76734 Canola cytosol 41.38 41.26
CDY47117 Canola cytosol 41.95 40.78
CDY64885 Canola cytosol 16.95 40.14
CDX97774 Canola cytosol 39.94 39.94
CDY29700 Canola cytosol 41.09 39.83
CDY02032 Canola cytosol 32.76 39.72
CDY12648 Canola cytosol 14.37 39.68
CDY29702 Canola cytosol 39.37 39.48
CDX84844 Canola plasma membrane 39.66 39.43
CDY05045 Canola cytosol 14.94 39.39
CDY17264 Canola cytosol 34.48 39.09
CDY22405 Canola cytosol, plastid 40.52 38.84
CDY72582 Canola mitochondrion 41.67 38.46
CDY41928 Canola cytosol 13.79 38.4
CDX97775 Canola mitochondrion 41.38 38.2
CDY66893 Canola mitochondrion 40.8 37.97
CDY05039 Canola cytosol, nucleus, plastid 39.37 37.95
CDX90709 Canola cytosol 36.49 37.69
CDX90710 Canola cytosol 15.8 37.67
CDX72730 Canola cytosol 42.53 37.66
CDY41929 Canola cytosol 20.4 37.57
CDX90705 Canola cytosol, nucleus, plastid 38.79 37.29
CDY51551 Canola cytosol 29.31 37.23
CDY69309 Canola cytosol 39.37 37.13
CDY29701 Canola cytosol 14.37 37.04
CDY05043 Canola cytosol 38.22 36.84
CDY24010 Canola plasma membrane 34.77 36.78
CDY05040 Canola cytosol 38.51 36.51
CDX79811 Canola cytosol 37.07 36.44
CDY27802 Canola cytosol 37.36 36.41
CDX84302 Canola cytosol 37.36 36.31
CDY41927 Canola cytosol 37.36 36.31
CDY05044 Canola nucleus 38.22 36.24
CDY50229 Canola cytosol 38.22 36.04
CDY17265 Canola cytosol 43.39 36.04
CDX90706 Canola cytosol 37.64 35.69
CDY17263 Canola cytosol 36.78 35.65
CDY28855 Canola cytosol 8.91 35.63
CDX74275 Canola cytosol 35.63 35.23
CDY24030 Canola cytosol 41.09 34.62
CDY67336 Canola cytosol 19.25 33.84
CDY05038 Canola cytosol 21.84 33.78
CDY20989 Canola cytosol 32.76 32.76
CDY43958 Canola cytosol 5.17 31.58
CDX91971 Canola cytosol 35.92 30.64
CDY64633 Canola cytosol, nucleus, plasma membrane 24.43 29.41
CDY02035 Canola cytosol, plastid 14.08 24.75
CDX74276 Canola cytosol 6.61 16.08
CDX91970 Canola cytosol 6.61 16.08
Protein Annotations
EnsemblPlants:CDX91425EnsemblPlantsGene:GSBRNA2T00152737001Gene3D:1.20.1280.50Gene3D:2.120.10.80GO:GO:0003674GO:GO:0005488
GO:GO:0005515InterPro:F-box-like_dom_sfInterPro:F-box_domInterPro:IPR001810InterPro:IPR015915InterPro:Kelch-typ_b-propeller
PANTHER:PTHR24414PANTHER:PTHR24414:SF23PFAM:PF12937PFscan:PS50181ProteinID:CDX91425ProteinID:CDX91425.1
SMART:SM00256SUPFAM:SSF117281SUPFAM:SSF81383UniParc:UPI0004EEF89AMapMan:35.1:
Description
BnaC04g07250D
Coordinates
chrLK031867:-:754365..755411
Molecular Weight (calculated)
40365.0 Da
IEP (calculated)
9.124
GRAVY (calculated)
-0.228
Length
348 amino acids
Sequence
(BLAST)
001: MSSPTKPEPT CLIMSLPDEV VVDIIARVST RFHPSISAVC RRFRSLVASP ELYKARRSLL GCNEHRLYVI LQSFGENSEP RVYNLRRKPD GGRRLVLISS
101: LPAMPHEASY VAVGSRIHVF GGFRLYDRKE PRALTIDCRY HTMQPLPTMP KRMIGTPLSH VMEGKIYVFG YTNYYNKVTA VFNTLTQTWE PEMTKPRIEL
201: RHVLNGPDGY VNSIVYDGTK ETKWETEWML KFNKWKSVCV SDDVFYSYDC LYNKLKAYDT KLRCWSEVKG VKTLLPGKQS LVWWSRVVNY GGNLIFLYQK
301: RICRIEELWC VEIALERRQD GEIWGKVEWS DVVIVGDFCL IESLVATF
Best Arabidopsis Sequence Match ( AT3G10510.1 )
(BLAST)
001: MLSEDEKEKT PPSVMTSIPD DVIMECIAPR VPRYNHSMLS LVSKQFRSLV ASPRLYKTRS LLGCTEDCVY VLIEDCILEV ARWYSLNRRT KRNMPGTVEN
101: RLVLISSLPP MPTAASYVVV GSNIFVMGGR YDWNVEEWEA QPPSSIALCI DCRTHTTRLV ADMPVGLMTN VSKVIDEKIY IVGRVWASAT IVEFDLRTEK
201: WADGTKPGWE ADDRWLTSLS TTAGRGPSSF ENNCDHKLME DILMDKEEIK HYHLFDNECV MGNILYVYDR HKYILRTYDP KQRTWGVVKG LEKLPLGGDE
301: SYIVSRGKML ILFLIVVLEY DDDASFQKRE LWCAEITVER REEGEIWGKV ECCDLLLEGG LIIGSCLVVT L
Arabidopsis Description
Putative F-box/kelch-repeat protein At3g10510 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAE9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.