CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra039467.1-P	Field mustard	cytosol	88.8	89.8
CDY41929	Canola	cytosol	45.1	85.19
CDY41928	Canola	cytosol	29.41	84.0
CDY41927	Canola	cytosol	82.07	81.84
CDY05043	Canola	cytosol	71.43	70.64
CDY05039	Canola	cytosol, nucleus, plastid	71.15	70.36
CDX90709	Canola	cytosol	65.55	69.44
CDX79811	Canola	cytosol	67.51	68.08
CDX90710	Canola	cytosol	27.17	66.44
CDY69309	Canola	cytosol	67.51	65.31
CDY05040	Canola	cytosol	65.83	64.03
CDX90705	Canola	cytosol, nucleus, plastid	64.43	63.54
CDY05044	Canola	nucleus	65.27	63.49
CDY50229	Canola	cytosol	65.27	63.14
CDX90706	Canola	cytosol	64.15	62.4
CDY05038	Canola	cytosol	38.66	61.33
CDY51551	Canola	cytosol	46.22	60.22
CDY20989	Canola	cytosol	58.54	60.06
CDY05037	Canola	nucleus	11.76	58.33
CDY67336	Canola	cytosol	31.93	57.58
CDY05045	Canola	cytosol	20.45	55.3
CDY28855	Canola	cytosol	11.2	45.98
CDY24008	Canola	cytosol	15.97	43.85
CDX97775	Canola	mitochondrion	44.26	41.91
CDX97774	Canola	cytosol	40.62	41.67
CDY72582	Canola	mitochondrion	43.98	41.64
CDX76734	Canola	cytosol	40.62	41.55
CDY64885	Canola	cytosol	17.09	41.5
CDY66893	Canola	mitochondrion	43.42	41.44
CDX84843	Canola	cytosol	29.97	40.68
CDY22405	Canola	cytosol, plastid	40.62	39.94
CDX84859	Canola	cytosol	30.53	39.78
CDY47117	Canola	cytosol	39.78	39.66
CDY29700	Canola	cytosol	39.78	39.55
CDY17264	Canola	cytosol	33.89	39.41
CDY56521	Canola	cytosol, plastid	40.06	39.18
CDX84844	Canola	plasma membrane	38.38	39.14
CDX84860	Canola	cytosol	38.66	39.09
CDX84302	Canola	cytosol	38.94	38.83
CDY29702	Canola	cytosol	37.25	38.33
CDY54214	Canola	cytosol	38.1	38.2
CDY12648	Canola	cytosol	13.45	38.1
CDX72730	Canola	cytosol	41.74	37.91
CDY24010	Canola	plasma membrane	34.73	37.69
CDX74917	Canola	cytosol	36.69	37.64
CDX91425	Canola	cytosol	36.41	37.36
CDY17263	Canola	cytosol	36.97	36.77
CDY29701	Canola	cytosol	13.45	35.56
CDY02036	Canola	cytosol	29.13	35.49
CDY28882	Canola	cytosol, plastid	17.09	35.26
CDY43958	Canola	cytosol	5.6	35.09
CDY17265	Canola	cytosol	40.34	34.37
CDX74275	Canola	cytosol	33.33	33.81
CDY24030	Canola	cytosol	38.38	33.17
CDY02032	Canola	cytosol	26.05	32.4
CDX91971	Canola	cytosol	33.61	29.41
CDY64633	Canola	cytosol, nucleus, plasma membrane	22.13	27.34
CDY02035	Canola	cytosol, plastid	14.29	25.76
CDX91970	Canola	cytosol	6.72	16.78
CDX74276	Canola	cytosol	6.72	16.78

Protein Annotations

Gene3D:2.120.10.80	MapMan:35.1	UniProt:A0A078GRK2	EnsemblPlants:CDY27802	ProteinID:CDY27802	ProteinID:CDY27802.1
InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00038608001
InterPro:IPR001810	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	PFAM:PF00646	PFscan:PS50181	PANTHER:PTHR24414
PANTHER:PTHR24414:SF23	SMART:SM00256	SUPFAM:SSF117281	SUPFAM:SSF81383	UniParc:UPI0004EE2DD6	SEG:seg

Description

BnaA05g32110DBnaA05g32110D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GRK2]

Coordinates

chrLK032209:+:507276..509186

Molecular Weight (calculated)

40724.9 Da

IEP (calculated)

6.977

GRAVY (calculated)

-0.238

Length

357 amino acids

Sequence
(BLAST)

001: MSENMEKSPE LSSLPDDVTI EIVARVPISH YPILNRVSKS FRKLIASPTL YERRSQLGYK EHRVYAVLRK THDDFGFYIL HRKVGCRNRL VFAGSLPLMY
101: SRGSYVSVGS KVYVFSDLNA LSIDCTSHTV QPISDDPQRL TNKLANVIDK KVYLICGSYF RVGSWDTWKS EVTVYDTETQ SWEPKLVKED MHVGLGPICY
201: DSVVMEGKVY VKGGRTDESF VYEPGERKWK LMDEVLSSEG WEGACVVDNV LYYHDRRGKV LRAYDPKQMC WSVVNGLEEF LAVKTTAHTI WSNAVSYGEK
301: KLALFFLEIH DGRQVICCAE IALERRQGGE IRGKMESCDV VIEDGLFEMA RFVSVTV

Best Arabidopsis Sequence Match ( AT3G10510.1 )
(BLAST)

001: MLSEDEKEKT PPSVMTSIPD DVIMECIAPR VPRYNHSMLS LVSKQFRSLV ASPRLYKTRS LLGCTEDCVY VLIEDCILEV ARWYSLNRRT KRNMPGTVEN
101: RLVLISSLPP MPTAASYVVV GSNIFVMGGR YDWNVEEWEA QPPSSIALCI DCRTHTTRLV ADMPVGLMTN VSKVIDEKIY IVGRVWASAT IVEFDLRTEK
201: WADGTKPGWE ADDRWLTSLS TTAGRGPSSF ENNCDHKLME DILMDKEEIK HYHLFDNECV MGNILYVYDR HKYILRTYDP KQRTWGVVKG LEKLPLGGDE
301: SYIVSRGKML ILFLIVVLEY DDDASFQKRE LWCAEITVER REEGEIWGKV ECCDLLLEGG LIIGSCLVVT L

Arabidopsis Description

Putative F-box/kelch-repeat protein At3g10510 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAE9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.