Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 3
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra005142.1-P | Field mustard | cytosol | 99.14 | 99.14 |
CDX91425 | Canola | cytosol | 93.1 | 93.1 |
CDY28882 | Canola | cytosol, plastid | 22.41 | 45.09 |
CDY05037 | Canola | nucleus | 9.2 | 44.44 |
CDX84860 | Canola | cytosol | 44.83 | 44.19 |
CDY12648 | Canola | cytosol | 15.8 | 43.65 |
CDX84843 | Canola | cytosol | 32.76 | 43.35 |
CDX84859 | Canola | cytosol | 33.91 | 43.07 |
CDY02036 | Canola | cytosol | 35.63 | 42.32 |
CDY47117 | Canola | cytosol | 43.1 | 41.9 |
CDX97774 | Canola | cytosol | 41.67 | 41.67 |
CDY56521 | Canola | cytosol, plastid | 43.68 | 41.64 |
CDY54214 | Canola | cytosol | 42.53 | 41.57 |
CDX76734 | Canola | cytosol | 41.38 | 41.26 |
CDY64885 | Canola | cytosol | 17.24 | 40.82 |
CDY29702 | Canola | cytosol | 40.52 | 40.63 |
CDY29700 | Canola | cytosol | 41.67 | 40.39 |
CDX84844 | Canola | plasma membrane | 40.23 | 40.0 |
CDY24008 | Canola | cytosol | 14.94 | 40.0 |
CDY72582 | Canola | mitochondrion | 42.82 | 39.52 |
CDY02032 | Canola | cytosol | 32.47 | 39.37 |
CDX97775 | Canola | mitochondrion | 42.53 | 39.26 |
CDY41928 | Canola | cytosol | 14.08 | 39.2 |
CDY17264 | Canola | cytosol | 34.48 | 39.09 |
CDX90710 | Canola | cytosol | 16.38 | 39.04 |
CDY66893 | Canola | mitochondrion | 41.95 | 39.04 |
CDY05045 | Canola | cytosol | 14.66 | 38.64 |
CDY22405 | Canola | cytosol, plastid | 40.23 | 38.57 |
CDX90705 | Canola | cytosol, nucleus, plastid | 39.94 | 38.4 |
CDY51551 | Canola | cytosol | 30.17 | 38.32 |
CDY05039 | Canola | cytosol, nucleus, plastid | 39.66 | 38.23 |
CDY29701 | Canola | cytosol | 14.66 | 37.78 |
CDX90709 | Canola | cytosol | 36.49 | 37.69 |
CDX72730 | Canola | cytosol | 42.53 | 37.66 |
CDY41929 | Canola | cytosol | 20.4 | 37.57 |
CDY24010 | Canola | plasma membrane | 35.34 | 37.39 |
CDY05040 | Canola | cytosol | 39.37 | 37.33 |
CDX84302 | Canola | cytosol | 38.22 | 37.15 |
CDY69309 | Canola | cytosol | 39.37 | 37.13 |
CDY05043 | Canola | cytosol | 38.51 | 37.12 |
CDY05044 | Canola | nucleus | 39.08 | 37.06 |
CDY17265 | Canola | cytosol | 44.25 | 36.75 |
CDX79811 | Canola | cytosol | 37.36 | 36.72 |
CDY27802 | Canola | cytosol | 37.64 | 36.69 |
CDY17263 | Canola | cytosol | 37.64 | 36.49 |
CDY50229 | Canola | cytosol | 38.51 | 36.31 |
CDY41927 | Canola | cytosol | 37.36 | 36.31 |
CDX90706 | Canola | cytosol | 38.22 | 36.24 |
CDY05038 | Canola | cytosol | 23.28 | 36.0 |
CDY28855 | Canola | cytosol | 8.91 | 35.63 |
CDY67336 | Canola | cytosol | 20.11 | 35.35 |
CDY24030 | Canola | cytosol | 41.95 | 35.35 |
CDX74275 | Canola | cytosol | 34.48 | 34.09 |
CDY20989 | Canola | cytosol | 33.33 | 33.33 |
CDY43958 | Canola | cytosol | 5.17 | 31.58 |
CDX91971 | Canola | cytosol | 34.77 | 29.66 |
CDY64633 | Canola | cytosol, nucleus, plasma membrane | 23.85 | 28.72 |
CDY02035 | Canola | cytosol, plastid | 14.66 | 25.76 |
CDX74276 | Canola | cytosol | 6.03 | 14.69 |
CDX91970 | Canola | cytosol | 6.03 | 14.69 |
Protein Annotations
EnsemblPlants:CDX74917 | EnsemblPlantsGene:GSBRNA2T00116918001 | Gene3D:1.20.1280.50 | Gene3D:2.120.10.80 | GO:GO:0003674 | GO:GO:0005488 |
GO:GO:0005515 | InterPro:F-box-like_dom_sf | InterPro:F-box_dom | InterPro:IPR001810 | InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller |
PANTHER:PTHR24414 | PANTHER:PTHR24414:SF23 | PFAM:PF12937 | PFscan:PS50181 | ProteinID:CDX74917 | ProteinID:CDX74917.1 |
SMART:SM00256 | SUPFAM:SSF117281 | SUPFAM:SSF81383 | UniParc:UPI0004EED8DE | MapMan:35.1 | : |
Description
BnaA05g06630D
Coordinates
chrLK031802:+:1465769..1466815
Molecular Weight (calculated)
40246.6 Da
IEP (calculated)
8.575
GRAVY (calculated)
-0.219
Length
348 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSPTKPEPT CLIMSLPDEV VVDIIARVST RFHPSISAVC RRFRSLVASP ELYKARRSLS GCNEHCLYVI LQSFGENSET RVYNLRRKPD GGHRLVLVSS
101: LPAMPHEASF VVDGSRIHVF GGFSLYDRRE RNALSIDCRY HTVQPLPTMP KRMIGTPLAH VMDGKIYVFG YTNYYNKVTA VFNTLTQTWE PEMTKPRIEL
201: RHVLNGPDGY VNSIVYDGTK ETKWETEWML KFNKWKSVCV IDDVFYSYDC LYNKLKAYDT KLRCWSEVKG VKTLLPTNKS LVWWPRVVNY GGNLLFLYQK
301: RICRIEEHWC AEIALERRQD GEIWGKVEWS DVVIVGDFCL IESLVATF
101: LPAMPHEASF VVDGSRIHVF GGFSLYDRRE RNALSIDCRY HTVQPLPTMP KRMIGTPLAH VMDGKIYVFG YTNYYNKVTA VFNTLTQTWE PEMTKPRIEL
201: RHVLNGPDGY VNSIVYDGTK ETKWETEWML KFNKWKSVCV IDDVFYSYDC LYNKLKAYDT KLRCWSEVKG VKTLLPTNKS LVWWPRVVNY GGNLLFLYQK
301: RICRIEEHWC AEIALERRQD GEIWGKVEWS DVVIVGDFCL IESLVATF
001: MLSEDEKEKT PPSVMTSIPD DVIMECIAPR VPRYNHSMLS LVSKQFRSLV ASPRLYKTRS LLGCTEDCVY VLIEDCILEV ARWYSLNRRT KRNMPGTVEN
101: RLVLISSLPP MPTAASYVVV GSNIFVMGGR YDWNVEEWEA QPPSSIALCI DCRTHTTRLV ADMPVGLMTN VSKVIDEKIY IVGRVWASAT IVEFDLRTEK
201: WADGTKPGWE ADDRWLTSLS TTAGRGPSSF ENNCDHKLME DILMDKEEIK HYHLFDNECV MGNILYVYDR HKYILRTYDP KQRTWGVVKG LEKLPLGGDE
301: SYIVSRGKML ILFLIVVLEY DDDASFQKRE LWCAEITVER REEGEIWGKV ECCDLLLEGG LIIGSCLVVT L
101: RLVLISSLPP MPTAASYVVV GSNIFVMGGR YDWNVEEWEA QPPSSIALCI DCRTHTTRLV ADMPVGLMTN VSKVIDEKIY IVGRVWASAT IVEFDLRTEK
201: WADGTKPGWE ADDRWLTSLS TTAGRGPSSF ENNCDHKLME DILMDKEEIK HYHLFDNECV MGNILYVYDR HKYILRTYDP KQRTWGVVKG LEKLPLGGDE
301: SYIVSRGKML ILFLIVVLEY DDDASFQKRE LWCAEITVER REEGEIWGKV ECCDLLLEGG LIIGSCLVVT L
Arabidopsis Description
Putative F-box/kelch-repeat protein At3g10510 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAE9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.