Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- extracellular 1
- plastid 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY11223 | Canola | nucleus | 96.96 | 84.79 |
| Bra029777.1-P | Field mustard | nucleus | 71.3 | 57.14 |
| KRH67593 | Soybean | endoplasmic reticulum | 61.74 | 49.48 |
| KRG95876 | Soybean | nucleus | 61.74 | 49.48 |
| Bra003139.1-P | Field mustard | mitochondrion, nucleus | 60.43 | 47.77 |
| PGSC0003DMT400060435 | Potato | nucleus | 62.17 | 47.67 |
| KRH67596 | Soybean | nucleus | 60.43 | 46.49 |
| Bra007004.1-P | Field mustard | nucleus | 60.0 | 46.46 |
| Bra023114.1-P | Field mustard | nucleus | 63.48 | 46.2 |
| EES00292 | Sorghum | nucleus | 58.26 | 45.27 |
| KRG95883 | Soybean | nucleus | 57.39 | 44.44 |
| KXG21152 | Sorghum | nucleus | 59.13 | 43.59 |
| Solyc05g054920.2.1 | Tomato | nucleus | 63.48 | 43.32 |
| PGSC0003DMT400061471 | Potato | nucleus | 58.7 | 42.86 |
| Solyc09g005980.2.1 | Tomato | nucleus | 58.7 | 42.86 |
| Os01t0155600-01 | Rice | nucleus | 60.0 | 42.59 |
| GSMUA_Achr6P15450_001 | Banana | nucleus | 61.3 | 41.84 |
| Os05t0120100-01 | Rice | mitochondrion, nucleus | 58.26 | 41.49 |
| TraesCS1A01G108000.2 | Wheat | nucleus | 50.0 | 41.37 |
| GSMUA_Achr10P... | Banana | nucleus | 58.26 | 41.23 |
| VIT_08s0040g02860.t01 | Wine grape | nucleus | 47.39 | 40.98 |
| TraesCS1D01G111000.2 | Wheat | nucleus | 50.87 | 40.77 |
| Os03t0285900-01 | Rice | nucleus | 58.26 | 40.61 |
| TraesCS1B01G130200.3 | Wheat | nucleus | 50.43 | 40.42 |
| TraesCS3B01G151100.1 | Wheat | nucleus | 56.52 | 40.25 |
| HORVU1Hr1G024060.21 | Barley | nucleus | 52.17 | 40.13 |
| TraesCS3D01G134500.1 | Wheat | nucleus | 56.52 | 40.12 |
| KXG21387 | Sorghum | nucleus | 46.09 | 40.0 |
| Zm00001d011004_P008 | Maize | nucleus | 58.7 | 39.94 |
| TraesCS1D01G051900.1 | Wheat | nucleus | 59.13 | 39.77 |
| TraesCS1B01G065900.2 | Wheat | nucleus | 58.7 | 39.59 |
| TraesCS1A01G049700.1 | Wheat | nucleus | 58.7 | 39.47 |
| TraesCS3A01G308000.1 | Wheat | nucleus | 56.52 | 39.04 |
| EES18924 | Sorghum | nucleus | 56.09 | 37.83 |
| Zm00001d011005_P005 | Maize | nucleus | 57.83 | 37.68 |
| HORVU1Hr1G009950.7 | Barley | nucleus, plastid | 58.7 | 36.68 |
| KRH42195 | Soybean | endoplasmic reticulum | 42.17 | 35.27 |
| Zm00001d035552_P001 | Maize | endoplasmic reticulum, extracellular, golgi | 56.52 | 35.04 |
| Zm00001d037543_P001 | Maize | nucleus | 26.96 | 34.44 |
| KRH58317 | Soybean | nucleus | 31.74 | 33.33 |
| Os05t0162600-01 | Rice | nucleus | 46.09 | 31.36 |
| OQU77498 | Sorghum | nucleus | 12.61 | 26.13 |
| Bra018550.1-P | Field mustard | nucleus | 26.52 | 23.37 |
| Bra018581.1-P | Field mustard | cytosol | 22.61 | 22.41 |
| Zm00001d035551_P007 | Maize | nucleus | 36.96 | 21.68 |
| Bra036267.1-P | Field mustard | nucleus | 29.13 | 21.47 |
| Bra019595.1-P | Field mustard | nucleus | 26.52 | 21.4 |
| Bra029955.1-P | Field mustard | nucleus | 23.91 | 21.15 |
| KXG21391 | Sorghum | nucleus | 36.09 | 20.75 |
| Bra017986.1-P | Field mustard | nucleus | 25.22 | 20.42 |
Protein Annotations
| MapMan:16.4.6.5 | Gene3D:3.30.70.330 | Gene3D:4.10.60.10 | EnsemblPlantsGene:Bra005756 | EnsemblPlants:Bra005756.1 | EnsemblPlants:Bra005756.1-P |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | GO:GO:0008270 | InterPro:IPR000504 |
| InterPro:IPR001878 | InterPro:IPR012677 | UniProt:M4CNG8 | InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 | PFAM:PF00098 |
| PFscan:PS50102 | PFscan:PS50158 | PANTHER:PTHR23147 | PANTHER:PTHR23147:SF21 | InterPro:RBD_domain_sf | InterPro:RRM_dom |
| SMART:SM00343 | SUPFAM:SSF54928 | SUPFAM:SSF57756 | UniParc:UPI000253FB20 | InterPro:Znf_CCHC | InterPro:Znf_CCHC_sf |
| SEG:seg | : | : | : | : | : |
Description
AT2G37340 (E=4e-024) RSZ33 | RSZ33; nucleic acid binding / nucleotide binding / zinc ion binding
Coordinates
chrA03:-:456157..457738
Molecular Weight (calculated)
25873.9 Da
IEP (calculated)
11.156
GRAVY (calculated)
-1.511
Length
230 amino acids
Sequence
(BLAST)
(BLAST)
001: MPRYEDRHGS TRLYVGHLSS RTRTRDVERL FSKYGRVRDV DMKRDFAFVT PRGSGSGSGY GSREISSSRG GPPPPGSGRC FNCGLDGHWA RDCTAGDWKN
101: KCYRCGDRGH IERNCKNSPK KLKRDQSYSR SPVRSPSPPR RSRRNRSRSR SPSYSRSRSP VRTEKARTPE PAARSRSPEP TVVNSPPLKD RNHSLSPNEK
201: SPVPEKNGQS PKDQENGNGQ DHSPRDEPSP
101: KCYRCGDRGH IERNCKNSPK KLKRDQSYSR SPVRSPSPPR RSRRNRSRSR SPSYSRSRSP VRTEKARTPE PAARSRSPEP TVVNSPPLKD RNHSLSPNEK
201: SPVPEKNGQS PKDQENGNGQ DHSPRDEPSP
001: MPRYDDRYGN TRLYVGRLSS RTRTRDLERL FSRYGRVRDV DMKRDYAFVE FSDPRDADDA RYYLDGRDFD GSRITVEASR GAPRGSRDNG SRGPPPGSGR
101: CFNCGVDGHW ARDCTAGDWK NKCYRCGERG HIERNCKNSP SPKKARQGGS YSRSPVKSRS PRRRRSPSRS RSYSRGRSYS RSRSPVRREK SVEDRSRSPK
201: AMERSVSPKG RDQSLSPDRK VIDASPKRGS DYDGSPKENG NGRNSASPIV GGGESPVGLN GQDRSPIDDE AELSRPSPKG SESP
101: CFNCGVDGHW ARDCTAGDWK NKCYRCGERG HIERNCKNSP SPKKARQGGS YSRSPVKSRS PRRRRSPSRS RSYSRGRSYS RSRSPVRREK SVEDRSRSPK
201: AMERSVSPKG RDQSLSPDRK VIDASPKRGS DYDGSPKENG NGRNSASPIV GGGESPVGLN GQDRSPIDDE AELSRPSPKG SESP
Arabidopsis Description
RS2Z32RSZ32 [Source:UniProtKB/TrEMBL;Acc:A0A178V7M8]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.