Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 6
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY33104 | Canola | mitochondrion | 99.72 | 98.37 |
| AT3G60980.1 | Thale cress | mitochondrion | 53.99 | 47.57 |
| CDX71714 | Canola | cytosol | 30.3 | 45.27 |
| CDY25066 | Canola | cytosol | 12.4 | 34.88 |
| CDX95410 | Canola | cytosol | 4.96 | 34.62 |
| CDY53879 | Canola | cytosol | 14.33 | 28.89 |
| CDX95653 | Canola | mitochondrion | 27.27 | 24.69 |
| CDY53878 | Canola | mitochondrion | 9.37 | 23.61 |
| CDY37773 | Canola | mitochondrion | 27.0 | 23.06 |
| CDX80067 | Canola | mitochondrion | 27.55 | 22.99 |
| CDY10671 | Canola | mitochondrion | 24.79 | 22.56 |
| CDX80068 | Canola | mitochondrion | 27.27 | 18.71 |
| CDY37774 | Canola | mitochondrion | 26.72 | 17.64 |
| CDY09648 | Canola | extracellular, mitochondrion, plastid | 15.43 | 14.85 |
| GSMUA_Achr10P... | Banana | mitochondrion, plastid | 20.11 | 11.81 |
| VIT_12s0035g01700.t01 | Wine grape | mitochondrion | 20.39 | 11.8 |
| CDX93444 | Canola | mitochondrion | 22.31 | 10.64 |
| CDX94912 | Canola | mitochondrion | 23.42 | 10.27 |
| CDY21873 | Canola | cytosol | 3.03 | 10.19 |
| CDY31037 | Canola | mitochondrion | 22.04 | 9.91 |
| CDY20645 | Canola | mitochondrion | 22.04 | 9.74 |
| KRH26275 | Soybean | mitochondrion | 20.94 | 9.6 |
| CDY34898 | Canola | mitochondrion | 20.94 | 8.9 |
| TraesCS2A01G524300.1 | Wheat | mitochondrion | 20.11 | 8.83 |
| Zm00001d032900_P001 | Maize | mitochondrion | 19.56 | 8.73 |
| TraesCS2D01G527300.1 | Wheat | mitochondrion | 20.39 | 8.67 |
| KRH06034 | Soybean | mitochondrion | 20.39 | 8.55 |
| CDY65945 | Canola | cytosol | 15.15 | 8.1 |
| Os05t0365500-01 | Rice | nucleus | 20.11 | 8.01 |
| OQU93028 | Sorghum | mitochondrion | 19.28 | 8.0 |
| TraesCS2A01G063500.1 | Wheat | mitochondrion | 20.39 | 7.88 |
| TraesCS2D01G061700.1 | Wheat | golgi | 20.39 | 7.79 |
| Solyc01g103160.2.1 | Tomato | nucleus | 20.11 | 7.49 |
| TraesCS2B01G554300.1 | Wheat | nucleus | 20.66 | 7.44 |
| TraesCS2B01G076200.1 | Wheat | golgi, nucleus, plastid | 20.66 | 7.4 |
| OQU78362 | Sorghum | cytosol | 13.5 | 7.15 |
| PGSC0003DMT400064089 | Potato | mitochondrion, plastid | 20.11 | 7.05 |
| CDY05914 | Canola | cytosol | 2.48 | 5.96 |
| CDY00193 | Canola | plastid | 9.09 | 5.68 |
| CDX86985 | Canola | mitochondrion | 9.09 | 5.6 |
| CDY08118 | Canola | plastid | 8.82 | 5.37 |
| CDX83077 | Canola | mitochondrion, plastid | 9.09 | 5.25 |
| CDX68524 | Canola | cytosol, mitochondrion, plastid | 9.09 | 5.25 |
| HORVU2Hr1G011400.1 | Barley | cytosol | 11.57 | 5.24 |
| HORVU2Hr1G011350.4 | Barley | cytosol, mitochondrion | 11.57 | 4.81 |
| CDY05913 | Canola | cytosol | 4.13 | 3.08 |
Protein Annotations
| EnsemblPlants:CDY25062 | EnsemblPlantsGene:GSBRNA2T00028901001 | Gene3D:1.25.40.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR011990 | InterPro:TPR-like_helical_dom_sf | PANTHER:PTHR24015 | PANTHER:PTHR24015:SF393 | ProteinID:CDY25062 | ProteinID:CDY25062.1 |
| UniParc:UPI0004EF1E67 | UniProt:A0A078GIS2 | MapMan:35.1 | : | : | : |
Description
BnaC06g18040DBnaC06g18040D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GIS2]
Coordinates
chrLK032168:+:87428..88573
Molecular Weight (calculated)
41313.5 Da
IEP (calculated)
8.670
GRAVY (calculated)
-0.355
Length
363 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLIRRMFGR RSFCTAVARK AEDIMKNPDC RTWELSSRVS YLVNSVGDLD TAARYSRLAV FSKPDDEPEV TVHTCETIIG SMVRAKRHKD AYDLYDYFFN
101: KHTLKPNSSC CNHIIESRFQ QGLVDEALDF HRTVKGVVPD YPSEASLRVL TKGLVHSGRF DLAQALLKGS SKMFPDHANH LFEEFKRSLS SSIADYKSTW
201: DFFYRGYPRY ENRVAFLMAT FMEYWFKQGK EVEAMECYNQ SVLPNKLLLC PETGNALLKV LLKYGQKSHA RALYNDMSAQ SGTLNSDTVQ IMAKGRCSKE
301: IKTYNKASAE SLLADSIGFI PVTTFKTIID VALKDGRIDD ALKTSNKMFD MALKEVSEQF NPL
101: KHTLKPNSSC CNHIIESRFQ QGLVDEALDF HRTVKGVVPD YPSEASLRVL TKGLVHSGRF DLAQALLKGS SKMFPDHANH LFEEFKRSLS SSIADYKSTW
201: DFFYRGYPRY ENRVAFLMAT FMEYWFKQGK EVEAMECYNQ SVLPNKLLLC PETGNALLKV LLKYGQKSHA RALYNDMSAQ SGTLNSDTVQ IMAKGRCSKE
301: IKTYNKASAE SLLADSIGFI PVTTFKTIID VALKDGRIDD ALKTSNKMFD MALKEVSEQF NPL
001: MSLIGRLNLG RRFCTAVPRR SEDIMSNPDC RPSDLCLRVS YLIRCVGDLD TAAKYARLAV FTSIKSESTT TICQSIIGGM LRDKRLKDAY DLYEFFFNQH
101: NLRPNSHCWN YIIESGFQQG LVNDALHFHH RCINSGQVHD YPSDDSFRIL TKGLVHSGRL DQAEAFLRGR TVNRTTYPDH VAYNNLIRGF LDLGNFKKAN
201: LVLGEFKRLF LIALSETKDD LHHSNYENRV AFLMATFMEY WFKQGKQVEA MECYNRCVLS NRLLVCAETG NALLKVLLKY GEKKNAWALY HELLDKNGTG
301: KGCLDSDTIK IMVDECFDMG WFSEAMETYK KARPKNDYLS DKYIITRFCE NRMLSEAESV FVDSLADDFG YIDVNTYKTM IDAYVKAGRI HDAIKTSNKM
401: IDATLKEVSH LF
101: NLRPNSHCWN YIIESGFQQG LVNDALHFHH RCINSGQVHD YPSDDSFRIL TKGLVHSGRL DQAEAFLRGR TVNRTTYPDH VAYNNLIRGF LDLGNFKKAN
201: LVLGEFKRLF LIALSETKDD LHHSNYENRV AFLMATFMEY WFKQGKQVEA MECYNRCVLS NRLLVCAETG NALLKVLLKY GEKKNAWALY HELLDKNGTG
301: KGCLDSDTIK IMVDECFDMG WFSEAMETYK KARPKNDYLS DKYIITRFCE NRMLSEAESV FVDSLADDFG YIDVNTYKTM IDAYVKAGRI HDAIKTSNKM
401: IDATLKEVSH LF
Arabidopsis Description
Pentatricopeptide repeat-containing protein At3g60980, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9LEX5]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.