Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY67899 | Canola | cytosol, plastid | 54.35 | 90.36 |
| CDY14650 | Canola | cytosol, nucleus, plastid | 71.74 | 89.59 |
| CDY64066 | Canola | cytosol | 34.06 | 87.04 |
| CDY67278 | Canola | cytosol | 25.36 | 86.42 |
| CDY35390 | Canola | nucleus | 68.48 | 61.56 |
| CDY22549 | Canola | nucleus | 68.12 | 60.84 |
| CDY06056 | Canola | cytosol | 56.88 | 59.92 |
| CDY06889 | Canola | cytosol | 63.04 | 58.59 |
| CDY38819 | Canola | nucleus | 40.58 | 57.73 |
| CDY57244 | Canola | cytosol | 63.77 | 57.14 |
| CDY14808 | Canola | cytosol | 62.32 | 56.95 |
| CDX71977 | Canola | cytosol | 63.77 | 56.77 |
| CDX88968 | Canola | cytosol | 63.41 | 56.27 |
| CDY67927 | Canola | cytosol | 63.04 | 55.95 |
| CDY56244 | Canola | cytosol | 57.25 | 54.67 |
| VIT_08s0007g06740.t01 | Wine grape | cytosol | 61.59 | 53.97 |
| PGSC0003DMT400060947 | Potato | cytosol | 46.74 | 52.65 |
| PGSC0003DMT400060943 | Potato | cytosol | 46.74 | 52.65 |
| KRH67087 | Soybean | nucleus | 59.42 | 48.52 |
| KRG95412 | Soybean | nucleus | 59.42 | 47.95 |
| Solyc10g080570.1.1 | Tomato | cytosol | 51.81 | 47.19 |
| CDX92848 | Canola | nucleus | 51.45 | 46.56 |
| CDX67865 | Canola | nucleus | 53.62 | 45.82 |
| CDY25077 | Canola | nucleus | 53.62 | 45.82 |
| CDY14268 | Canola | nucleus | 52.54 | 45.31 |
| CDY19018 | Canola | nucleus | 52.54 | 45.03 |
| CDX89221 | Canola | nucleus | 52.54 | 45.03 |
| CDY43950 | Canola | nucleus | 52.9 | 44.92 |
| CDX89132 | Canola | cytosol | 52.9 | 44.79 |
| CDX97399 | Canola | nucleus | 51.45 | 44.24 |
| CDX75727 | Canola | cytosol | 26.81 | 34.58 |
| CDX82523 | Canola | cytosol | 26.81 | 34.58 |
| CDY11709 | Canola | nucleus | 9.06 | 15.15 |
| CDY10787 | Canola | plastid | 14.86 | 14.19 |
| CDY25763 | Canola | nucleus | 13.41 | 13.6 |
| CDX99687 | Canola | nucleus | 13.77 | 13.43 |
| CDY52473 | Canola | nucleus | 13.77 | 13.38 |
| CDY12498 | Canola | nucleus | 13.04 | 13.24 |
| CDY01699 | Canola | nucleus, plastid | 13.04 | 12.77 |
| CDY27008 | Canola | nucleus | 14.86 | 12.46 |
| CDY47873 | Canola | nucleus | 14.49 | 12.35 |
| CDY01695 | Canola | nucleus | 12.68 | 11.33 |
| CDY01757 | Canola | cytosol | 2.17 | 11.32 |
| CDY01756 | Canola | cytosol, nucleus, plastid | 11.96 | 11.11 |
| CDX95911 | Canola | cytosol, nucleus, plastid | 11.59 | 10.88 |
| CDX96138 | Canola | nucleus | 13.41 | 10.88 |
| CDX83363 | Canola | cytosol, nucleus, plasma membrane | 6.88 | 10.61 |
| CDX96140 | Canola | cytosol, nucleus, plastid | 13.04 | 10.32 |
| CDY36211 | Canola | nucleus | 13.41 | 10.25 |
| CDY36209 | Canola | plastid | 7.61 | 9.95 |
| CDY70665 | Canola | nucleus | 11.23 | 9.57 |
| CDY01758 | Canola | cytosol | 7.25 | 4.58 |
Protein Annotations
| KEGG:00220+6.3.2.- | KEGG:00261+6.3.2.- | KEGG:00380+6.3.2.- | MapMan:19.2.2.1.5.3.5 | Gene3D:2.60.210.10 | InterPro:7-in-absentia-prot_TRAF-dom |
| GO:A0A078JN49 | UniProt:A0A078JN49 | EnsemblPlants:CDY67900 | ProteinID:CDY67900 | ProteinID:CDY67900.1 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006464 | GO:GO:0006511 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
| GO:GO:0009987 | GO:GO:0016567 | GO:GO:0019538 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00067645001 | InterPro:IPR008974 |
| PFAM:PF03145 | PANTHER:PTHR10315 | PANTHER:PTHR10315:SF73 | InterPro:SINA-like | SUPFAM:SSF49599 | InterPro:TRAF-like |
| UniPathway:UPA00143 | UniParc:UPI0004EE2FA2 | SEG:seg | : | : | : |
Description
BnaUnng02640DE3 ubiquitin-protein ligase [Source:UniProtKB/TrEMBL;Acc:A0A078JN49]
Coordinates
chrLK036635:-:5220..6432
Molecular Weight (calculated)
31727.6 Da
IEP (calculated)
9.569
GRAVY (calculated)
-0.168
Length
276 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPGGSTYKE ALKSNWIGLA YEVRMSPLEK SVQARAMVFM SFSNVRFAQI SCILQLIRFV NFPIMSQWPH VMFKLQTTSA EHVHPTCRYE LGNIRCLALE
101: KVAESLEVSC RYQSLGCHDI FPYYSKVKHE QHCSISKTII KSICIVVALS TTVNVKSNPQ EVENATWMLT VFNFFGRQFC LHFEAFQLGT APVYMAFLRF
201: MGDENETKKF SYGLEVGAPS RKLTWQGIPR SIRDGHRKVR DSQNGLIIPR NMALFFSGSD KEERKLRVTG RIWREE
101: KVAESLEVSC RYQSLGCHDI FPYYSKVKHE QHCSISKTII KSICIVVALS TTVNVKSNPQ EVENATWMLT VFNFFGRQFC LHFEAFQLGT APVYMAFLRF
201: MGDENETKKF SYGLEVGAPS RKLTWQGIPR SIRDGHRKVR DSQNGLIIPR NMALFFSGSD KEERKLRVTG RIWREE
001: MAPGGSALKE ALESNSTGVD YEVKMAKVEA NSKPTKSGSG SIGKFHSSNG VYELLECPVC TNLMYPPIHQ CPNGHTLCSS CKLRVQNTCP TCRYELGNIR
101: CLALEKVAES LEVPCRYQNL GCQDIFPYYS KLKHEQHCRF RSYSCPYAGS ECSVTGDIPT LVDHLKDDHK VDMHDGCTFN HRYVKSNPHE VENATWMLTV
201: FNCFGRQFCL HFEAFQLGMA PVYMAFLRFM GDENEAKKFS YSLEVGAHSR KLTWQGIPRS IRDSHRKVRD SQDGLIIPRN LALYFSGSDK EELKLRVTGR
301: IWKEE
101: CLALEKVAES LEVPCRYQNL GCQDIFPYYS KLKHEQHCRF RSYSCPYAGS ECSVTGDIPT LVDHLKDDHK VDMHDGCTFN HRYVKSNPHE VENATWMLTV
201: FNCFGRQFCL HFEAFQLGMA PVYMAFLRFM GDENEAKKFS YSLEVGAHSR KLTWQGIPRS IRDSHRKVRD SQDGLIIPRN LALYFSGSDK EELKLRVTGR
301: IWKEE
Arabidopsis Description
SINAT1E3 ubiquitin-protein ligase [Source:UniProtKB/TrEMBL;Acc:A0A178VZ75]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.