Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX83363 | Canola | cytosol, nucleus, plasma membrane | 31.07 | 53.63 |
| CDY52473 | Canola | nucleus | 46.93 | 51.06 |
| CDX99687 | Canola | nucleus | 46.6 | 50.88 |
| CDY01699 | Canola | nucleus, plastid | 44.66 | 48.94 |
| CDY11709 | Canola | nucleus | 25.89 | 48.48 |
| HORVU3Hr1G005260.1 | Barley | cytosol | 12.3 | 41.76 |
| CDY10787 | Canola | plastid | 37.86 | 40.48 |
| CDY12498 | Canola | nucleus | 33.66 | 38.24 |
| CDY25763 | Canola | nucleus | 33.66 | 38.24 |
| CDX95911 | Canola | cytosol, nucleus, plastid | 35.28 | 37.07 |
| CDY01756 | Canola | cytosol, nucleus, plastid | 35.28 | 36.7 |
| CDX96140 | Canola | cytosol, nucleus, plastid | 38.19 | 33.81 |
| CDY27008 | Canola | nucleus | 33.98 | 31.91 |
| CDY47873 | Canola | nucleus | 33.33 | 31.79 |
| CDY36209 | Canola | plastid | 21.36 | 31.28 |
| CDY01757 | Canola | cytosol | 5.18 | 30.19 |
| Solyc03g036460.1.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 20.71 | 28.96 |
| HORVU3Hr1G004860.1 | Barley | cytosol | 22.98 | 28.17 |
| CDY70665 | Canola | nucleus | 29.13 | 27.78 |
| TraesCS3D01G028800.1 | Wheat | nucleus | 19.09 | 27.57 |
| VIT_14s0006g01870.t01 | Wine grape | cytosol | 17.48 | 27.0 |
| TraesCS3D01G031300.1 | Wheat | nucleus | 23.62 | 26.64 |
| KRH42263 | Soybean | nucleus | 27.18 | 26.25 |
| TraesCS3A01G048300.1 | Wheat | nucleus | 22.98 | 25.91 |
| TraesCS3B01G050100.1 | Wheat | cytosol | 22.98 | 25.91 |
| KRH58384 | Soybean | nucleus | 26.21 | 25.31 |
| TraesCS3B01G033800.1 | Wheat | nucleus | 22.33 | 25.18 |
| TraesCS3D01G504900.1 | Wheat | nucleus | 22.01 | 24.82 |
| KXG37942 | Sorghum | cytosol, nucleus, plastid | 21.36 | 24.81 |
| TraesCS3B01G050700.1 | Wheat | nucleus | 24.6 | 24.76 |
| KXG32009 | Sorghum | nucleus | 23.62 | 24.66 |
| PGSC0003DMT400043047 | Potato | cytosol | 14.56 | 24.46 |
| KXG32008 | Sorghum | cytosol, nucleus, plastid | 21.04 | 24.44 |
| CDX96138 | Canola | nucleus | 26.54 | 24.12 |
| TraesCS3A01G030800.1 | Wheat | cytosol | 21.36 | 24.0 |
| TraesCS3B01G053000.1 | Wheat | cytosol | 21.68 | 23.84 |
| TraesCS3D01G030300.1 | Wheat | nucleus | 22.98 | 23.75 |
| TraesCS3B01G560800.1 | Wheat | nucleus | 21.36 | 23.74 |
| HORVU4Hr1G056260.1 | Barley | nucleus | 21.04 | 23.64 |
| KXG37941 | Sorghum | cytosol | 21.36 | 23.57 |
| TraesCS3A01G031100.1 | Wheat | cytosol | 20.39 | 23.42 |
| TraesCS3B01G052800.1 | Wheat | cytosol | 21.36 | 23.4 |
| TraesCS3B01G053500.1 | Wheat | cytosol | 21.36 | 23.4 |
| TraesCS3D01G029000.1 | Wheat | cytosol | 21.36 | 23.4 |
| TraesCS3A01G031200.1 | Wheat | cytosol | 20.06 | 23.13 |
| TraesCS3B01G050200.1 | Wheat | nucleus | 18.45 | 23.08 |
| TraesCS3A01G030600.1 | Wheat | nucleus | 21.04 | 23.05 |
| TraesCS3B01G074800.1 | Wheat | cytosol | 20.39 | 22.74 |
| CDY36211 | Canola | nucleus | 26.54 | 22.71 |
| TraesCS2A01G446400.1 | Wheat | cytosol, nucleus, plastid | 19.74 | 22.68 |
| HORVU3Hr1G004950.1 | Barley | nucleus | 22.01 | 22.67 |
| TraesCS3B01G032100.1 | Wheat | cytosol | 20.71 | 22.54 |
| TraesCS3B01G033700.1 | Wheat | nucleus | 21.04 | 22.26 |
| TraesCS3A01G062700.1 | Wheat | nucleus | 19.74 | 22.18 |
| TraesCS3B01G031200.1 | Wheat | nucleus | 20.71 | 21.92 |
| TraesCS3B01G053400.1 | Wheat | cytosol, nucleus, plastid | 20.71 | 21.84 |
| CDY57244 | Canola | cytosol | 21.68 | 21.75 |
| Solyc03g042550.1.1 | Tomato | nucleus | 25.24 | 21.67 |
| PGSC0003DMT400043050 | Potato | nucleus | 26.54 | 21.52 |
| HORVU3Hr1G005320.1 | Barley | nucleus | 18.45 | 21.51 |
| CDY56244 | Canola | cytosol | 20.06 | 21.45 |
| Solyc03g034460.2.1 | Tomato | nucleus | 24.92 | 21.39 |
| CDX71977 | Canola | cytosol | 21.36 | 21.29 |
| CDX88968 | Canola | cytosol | 21.36 | 21.22 |
| CDY67927 | Canola | cytosol | 21.36 | 21.22 |
| EES00387 | Sorghum | nucleus | 21.68 | 21.0 |
| TraesCS5A01G228300.1 | Wheat | cytosol | 21.36 | 20.95 |
| TraesCS3B01G050900.1 | Wheat | cytosol | 19.74 | 20.89 |
| TraesCS3B01G054400.1 | Wheat | cytosol | 20.06 | 20.88 |
| HORVU2Hr1G118560.2 | Barley | nucleus | 18.77 | 20.71 |
| HORVU3Hr1G004890.1 | Barley | nucleus | 20.06 | 20.67 |
| TraesCS3A01G031300.1 | Wheat | cytosol | 18.77 | 20.64 |
| TraesCS3B01G052700.1 | Wheat | nucleus | 16.83 | 20.55 |
| CDY14808 | Canola | cytosol | 20.06 | 20.53 |
| TraesCS1A01G060800.1 | Wheat | nucleus | 20.39 | 20.52 |
| KXG32014 | Sorghum | nucleus | 14.56 | 20.45 |
| CDX92848 | Canola | nucleus | 20.06 | 20.33 |
| OQU77422 | Sorghum | cytosol | 18.77 | 20.28 |
| TraesCS3D01G015600.1 | Wheat | cytosol | 19.42 | 20.2 |
| TraesCS4B01G363200.1 | Wheat | nucleus | 21.36 | 20.12 |
| TraesCSU01G045900.1 | Wheat | cytosol | 19.42 | 20.07 |
| TraesCS3A01G062800.1 | Wheat | nucleus | 18.77 | 20.0 |
| TraesCS3B01G052400.1 | Wheat | nucleus | 22.01 | 20.0 |
| TraesCS4D01G356400.2 | Wheat | nucleus | 21.68 | 19.94 |
| TraesCS3B01G028900.1 | Wheat | cytosol | 19.42 | 19.93 |
| Solyc03g034450.2.1 | Tomato | nucleus | 25.24 | 19.9 |
| EES17728 | Sorghum | cytosol, mitochondrion, nucleus | 21.04 | 19.88 |
| CDY06889 | Canola | cytosol | 19.09 | 19.87 |
| TraesCS3A01G030100.1 | Wheat | nucleus | 19.09 | 19.87 |
| CDY06056 | Canola | cytosol | 16.83 | 19.85 |
| Solyc03g042520.1.1 | Tomato | nucleus | 19.74 | 19.68 |
| TraesCS5A01G531400.2 | Wheat | nucleus | 21.04 | 19.64 |
| OQU78944 | Sorghum | nucleus | 20.71 | 19.63 |
| CDX97399 | Canola | nucleus | 20.39 | 19.63 |
| Zm00001d041049_P001 | Maize | nucleus | 20.71 | 19.57 |
| TraesCS3B01G032300.1 | Wheat | cytosol | 12.62 | 19.5 |
| CDY22549 | Canola | nucleus | 19.42 | 19.42 |
| TraesCS3A01G032200.1 | Wheat | nucleus | 21.36 | 19.41 |
| CDY14268 | Canola | nucleus | 20.06 | 19.38 |
| CDY35390 | Canola | nucleus | 19.09 | 19.22 |
| TraesCS3D01G029300.1 | Wheat | nucleus | 21.04 | 19.12 |
| CDX89221 | Canola | nucleus | 19.74 | 18.94 |
| CDY19018 | Canola | nucleus | 19.74 | 18.94 |
| HORVU0Hr1G006120.2 | Barley | cytosol, nucleus, plastid | 17.15 | 18.93 |
| TraesCS3D01G029600.1 | Wheat | nucleus | 20.39 | 18.81 |
| CDY43950 | Canola | nucleus | 19.74 | 18.77 |
| CDX89132 | Canola | cytosol | 19.74 | 18.71 |
| CDX67865 | Canola | nucleus | 19.42 | 18.58 |
| CDY25077 | Canola | nucleus | 19.42 | 18.58 |
| CDY67278 | Canola | cytosol | 4.85 | 18.52 |
| TraesCS1D01G061700.1 | Wheat | nucleus | 21.04 | 18.47 |
| EES17731 | Sorghum | nucleus | 20.39 | 18.21 |
| HORVU3Hr1G004880.2 | Barley | nucleus | 19.74 | 17.99 |
| TraesCS2A01G589200.1 | Wheat | nucleus, plastid | 21.68 | 17.96 |
| HORVU4Hr1G087120.3 | Barley | nucleus | 20.71 | 17.88 |
| TraesCS2B01G594500.1 | Wheat | nucleus, plastid | 21.68 | 17.87 |
| TraesCS2D01G564800.1 | Wheat | nucleus, plastid | 21.68 | 17.87 |
| HORVU2Hr1G118840.1 | Barley | plastid | 21.36 | 17.79 |
| HORVU0Hr1G006130.1 | Barley | nucleus | 18.77 | 17.58 |
| OQU86453 | Sorghum | cytosol | 11.97 | 17.29 |
| OQU77414 | Sorghum | mitochondrion, nucleus | 19.74 | 17.23 |
| HORVU1Hr1G012490.3 | Barley | nucleus | 18.45 | 17.17 |
| OQU77425 | Sorghum | nucleus | 20.71 | 17.02 |
| KXG21322 | Sorghum | nucleus | 20.06 | 16.58 |
| TraesCS2A01G586400.1 | Wheat | nucleus | 19.42 | 16.44 |
| TraesCS2D01G600200.1 | Wheat | nucleus | 19.42 | 16.44 |
| TraesCSU01G021700.1 | Wheat | nucleus | 19.09 | 16.16 |
| TraesCSU01G231400.1 | Wheat | nucleus | 17.15 | 15.32 |
| HORVU3Hr1G005270.1 | Barley | nucleus | 16.5 | 14.96 |
| CDX75727 | Canola | cytosol | 10.36 | 14.95 |
| TraesCS1D01G102900.1 | Wheat | nucleus | 17.8 | 14.4 |
| CDX82523 | Canola | cytosol | 9.71 | 14.02 |
| TraesCS1A01G070000.1 | Wheat | plastid | 11.0 | 13.99 |
| TraesCS3B01G031100.1 | Wheat | nucleus | 18.12 | 13.83 |
| TraesCS3D01G029700.1 | Wheat | cytosol, mitochondrion, nucleus | 12.62 | 13.68 |
| EES17735 | Sorghum | mitochondrion | 19.74 | 13.59 |
| TraesCS3D01G029400.1 | Wheat | nucleus | 20.06 | 13.51 |
| TraesCS3A01G032100.1 | Wheat | nucleus | 19.74 | 13.38 |
| CDY01758 | Canola | cytosol | 18.77 | 13.27 |
| EES02574 | Sorghum | nucleus | 18.77 | 12.95 |
| TraesCS3B01G052300.1 | Wheat | nucleus | 19.42 | 12.93 |
| CDY67900 | Canola | cytosol, endoplasmic reticulum, plastid | 11.33 | 12.68 |
| CDY14650 | Canola | cytosol, nucleus, plastid | 8.41 | 11.76 |
| CDY64066 | Canola | cytosol | 3.56 | 10.19 |
| CDY38819 | Canola | nucleus | 5.83 | 9.28 |
| CDY67899 | Canola | cytosol, plastid | 4.53 | 8.43 |
| Os05t0152700-00 | Rice | cytosol, extracellular | 0.65 | 2.02 |
Protein Annotations
| KEGG:00220+6.3.2.- | KEGG:00261+6.3.2.- | KEGG:00380+6.3.2.- | MapMan:19.2.2.1.5.3.5 | Gene3D:3.30.40.10 | InterPro:7-in-absentia-prot_TRAF-dom |
| GO:A0A078EI07 | EnsemblPlants:CDY01695 | ProteinID:CDY01695 | ProteinID:CDY01695.1 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006511 |
| GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009056 | GO:GO:0009987 |
| GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00112782001 | InterPro:IPR001841 | InterPro:IPR008974 | InterPro:IPR013010 | InterPro:IPR013083 |
| PFAM:PF03145 | PFscan:PS50089 | PFscan:PS51081 | PANTHER:PTHR10315 | PANTHER:PTHR10315:SF43 | InterPro:SINA-like |
| SUPFAM:SSF49599 | SUPFAM:SSF57850 | InterPro:TRAF-like | UniPathway:UPA00143 | UniParc:UPI0004EE0E7A | InterPro:Znf_RING |
| InterPro:Znf_RING/FYVE/PHD | InterPro:Znf_SIAH | : | : | : | : |
Description
BnaC04g30570D
Coordinates
chrLK031928:+:527137..528745
Molecular Weight (calculated)
34675.7 Da
IEP (calculated)
8.621
GRAVY (calculated)
-0.405
Length
309 amino acids
Sequence
(BLAST)
(BLAST)
001: MECVSSTEDK PRTGILNLDV LSCPICVEPF TIPIFQCDNG HLACSSCCPK LRNKCPSCSW PVGHSRCRAM ETVLESISIP CQNAGFGCTT KLIYGEESTH
101: EKTCTFSPCS CPVKDCNYTG SCKDVYVHYK NLIHPNPQST SQRYRVRCGE SFSVKMNISD NLVIGTLYKE RLLFTVQSFR KSYGVYVIVS CIAPSSPKVG
201: KFSYCITYTI DGHSITYKSP ELKKIQRVSF HTPQENYMLI ANSSLHGESL EMRICIKKEK RDKTNDIKGP HQKRRAEGDG TIRRTAPSTP GLRKLSYRPS
301: YSDDGQILI
101: EKTCTFSPCS CPVKDCNYTG SCKDVYVHYK NLIHPNPQST SQRYRVRCGE SFSVKMNISD NLVIGTLYKE RLLFTVQSFR KSYGVYVIVS CIAPSSPKVG
201: KFSYCITYTI DGHSITYKSP ELKKIQRVSF HTPQENYMLI ANSSLHGESL EMRICIKKEK RDKTNDIKGP HQKRRAEGDG TIRRTAPSTP GLRKLSYRPS
301: YSDDGQILI
001: MVGAAILESP GEGIGSNSIL SQKRQLSSSD AAKRDAKKRS TMLMDLEILD CPICYEAFTI PIFQCDNGHL ACSSCCPKLN NKCPACTSPV GHNRCRAMES
101: VLESILIPCP NAKLGCKKNV SYGKELTHEK ECMFSHCACP ALDCNYTSSY KDLYTHYRIT HMEINQINTF ICDIPLSVRM NISKKILIRT EHLTNHLFAV
201: QCFREPYGVY VTVSCIAPSS PELSQYSYAL SYTVDGHTVI YQSPEVKRVL KLSFQTPQEN FMLIPNSLLR GDVLEMRISV KKLNKE
101: VLESILIPCP NAKLGCKKNV SYGKELTHEK ECMFSHCACP ALDCNYTSSY KDLYTHYRIT HMEINQINTF ICDIPLSVRM NISKKILIRT EHLTNHLFAV
201: QCFREPYGVY VTVSCIAPSS PELSQYSYAL SYTVDGHTVI YQSPEVKRVL KLSFQTPQEN FMLIPNSLLR GDVLEMRISV KKLNKE
Arabidopsis Description
E3 ubiquitin-protein ligase SINA-like 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKD7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.