Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra025434.1-P | Field mustard | nucleus | 98.59 | 98.59 |
| CDX99687 | Canola | nucleus | 95.42 | 95.76 |
| CDY01699 | Canola | nucleus, plastid | 56.69 | 57.09 |
| CDY11709 | Canola | nucleus | 30.99 | 53.33 |
| CDX83363 | Canola | cytosol, nucleus, plasma membrane | 32.75 | 51.96 |
| CDY01695 | Canola | nucleus | 51.06 | 46.93 |
| CDY01756 | Canola | cytosol, nucleus, plastid | 46.13 | 44.11 |
| CDY10787 | Canola | plastid | 44.37 | 43.6 |
| CDX95911 | Canola | cytosol, nucleus, plastid | 45.07 | 43.54 |
| HORVU3Hr1G005260.1 | Barley | cytosol | 13.38 | 41.76 |
| AT5G62800.1 | Thale cress | nucleus | 48.24 | 39.37 |
| CDY36209 | Canola | plastid | 28.87 | 38.86 |
| CDY12498 | Canola | nucleus | 36.27 | 37.87 |
| CDY25763 | Canola | nucleus | 35.92 | 37.5 |
| CDX96140 | Canola | cytosol, nucleus, plastid | 45.77 | 37.25 |
| CDY47873 | Canola | nucleus | 39.79 | 34.88 |
| CDY27008 | Canola | nucleus | 40.14 | 34.65 |
| KRH42263 | Soybean | nucleus | 36.27 | 32.19 |
| CDY01757 | Canola | cytosol | 5.99 | 32.08 |
| CDY70665 | Canola | nucleus | 36.27 | 31.79 |
| KRH58384 | Soybean | nucleus | 35.56 | 31.56 |
| HORVU3Hr1G004860.1 | Barley | cytosol | 26.06 | 29.37 |
| VIT_14s0006g01870.t01 | Wine grape | cytosol | 20.42 | 29.0 |
| Solyc03g036460.1.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 22.54 | 28.96 |
| TraesCS3D01G028800.1 | Wheat | nucleus | 21.48 | 28.5 |
| TraesCS3D01G031300.1 | Wheat | nucleus | 26.41 | 27.37 |
| TraesCS3D01G504900.1 | Wheat | nucleus | 26.41 | 27.37 |
| CDX96138 | Canola | nucleus | 32.39 | 27.06 |
| TraesCS3B01G033800.1 | Wheat | nucleus | 26.06 | 27.01 |
| KXG32008 | Sorghum | cytosol, nucleus, plastid | 25.0 | 26.69 |
| TraesCS3A01G048300.1 | Wheat | nucleus | 25.7 | 26.64 |
| TraesCS3B01G050100.1 | Wheat | cytosol | 25.7 | 26.64 |
| HORVU4Hr1G056260.1 | Barley | nucleus | 25.7 | 26.55 |
| TraesCS3A01G031100.1 | Wheat | cytosol | 25.0 | 26.39 |
| TraesCS4B01G363200.1 | Wheat | nucleus | 29.93 | 25.91 |
| TraesCS3B01G560800.1 | Wheat | nucleus | 25.35 | 25.9 |
| TraesCS5A01G531400.2 | Wheat | nucleus | 29.93 | 25.68 |
| TraesCS4D01G356400.2 | Wheat | nucleus | 30.28 | 25.6 |
| KXG37942 | Sorghum | cytosol, nucleus, plastid | 23.94 | 25.56 |
| TraesCS3B01G053500.1 | Wheat | cytosol | 25.35 | 25.53 |
| TraesCS3A01G030800.1 | Wheat | cytosol | 24.65 | 25.45 |
| TraesCS3D01G030300.1 | Wheat | nucleus | 26.76 | 25.42 |
| KXG32009 | Sorghum | nucleus | 26.41 | 25.34 |
| HORVU3Hr1G005320.1 | Barley | nucleus | 23.59 | 25.28 |
| CDY36211 | Canola | nucleus | 32.04 | 25.21 |
| TraesCS2A01G446400.1 | Wheat | cytosol, nucleus, plastid | 23.59 | 24.91 |
| TraesCS3B01G052700.1 | Wheat | nucleus | 22.18 | 24.9 |
| TraesCS1A01G060800.1 | Wheat | nucleus | 26.76 | 24.76 |
| TraesCS3A01G062700.1 | Wheat | nucleus | 23.94 | 24.73 |
| TraesCS3A01G031200.1 | Wheat | cytosol | 23.24 | 24.63 |
| TraesCS3B01G053000.1 | Wheat | cytosol | 24.3 | 24.56 |
| OQU78944 | Sorghum | nucleus | 28.17 | 24.54 |
| HORVU3Hr1G004890.1 | Barley | nucleus | 25.7 | 24.33 |
| HORVU3Hr1G004950.1 | Barley | nucleus | 25.7 | 24.33 |
| TraesCS3B01G074800.1 | Wheat | cytosol | 23.59 | 24.19 |
| Solyc03g034460.2.1 | Tomato | nucleus | 30.63 | 24.17 |
| Zm00001d041049_P001 | Maize | nucleus | 27.82 | 24.16 |
| TraesCS3B01G031200.1 | Wheat | nucleus | 24.65 | 23.97 |
| PGSC0003DMT400043047 | Potato | cytosol | 15.49 | 23.91 |
| TraesCS3B01G052800.1 | Wheat | cytosol | 23.59 | 23.76 |
| TraesCS3D01G029000.1 | Wheat | cytosol | 23.59 | 23.76 |
| Solyc03g042550.1.1 | Tomato | nucleus | 29.93 | 23.61 |
| TraesCS3B01G053400.1 | Wheat | cytosol, nucleus, plastid | 24.3 | 23.55 |
| TraesCS3B01G033700.1 | Wheat | nucleus | 23.94 | 23.29 |
| TraesCS3B01G032100.1 | Wheat | cytosol | 23.24 | 23.24 |
| Solyc03g042520.1.1 | Tomato | nucleus | 25.35 | 23.23 |
| HORVU4Hr1G087120.3 | Barley | nucleus | 29.23 | 23.18 |
| TraesCS3A01G062800.1 | Wheat | nucleus | 23.59 | 23.1 |
| PGSC0003DMT400043050 | Potato | nucleus | 30.99 | 23.1 |
| TraesCS3A01G030600.1 | Wheat | nucleus | 22.89 | 23.05 |
| TraesCS3B01G050700.1 | Wheat | nucleus | 24.65 | 22.8 |
| TraesCS3B01G050200.1 | Wheat | nucleus | 19.72 | 22.67 |
| KXG37941 | Sorghum | cytosol | 22.18 | 22.5 |
| OQU77422 | Sorghum | cytosol | 22.54 | 22.38 |
| TraesCS5A01G228300.1 | Wheat | cytosol | 24.65 | 22.22 |
| HORVU1Hr1G012490.3 | Barley | nucleus | 25.7 | 21.99 |
| CDX92848 | Canola | nucleus | 23.59 | 21.97 |
| EES00387 | Sorghum | nucleus | 24.65 | 21.94 |
| Solyc03g034450.2.1 | Tomato | nucleus | 30.28 | 21.94 |
| TraesCS3A01G030100.1 | Wheat | nucleus | 22.54 | 21.55 |
| TraesCS3D01G015600.1 | Wheat | cytosol | 22.54 | 21.55 |
| HORVU2Hr1G118560.2 | Barley | nucleus | 21.13 | 21.43 |
| KXG32014 | Sorghum | nucleus | 16.55 | 21.36 |
| TraesCS1D01G061700.1 | Wheat | nucleus | 26.41 | 21.31 |
| CDX71977 | Canola | cytosol | 23.24 | 21.29 |
| CDY14268 | Canola | nucleus | 23.94 | 21.25 |
| TraesCS3B01G050900.1 | Wheat | cytosol | 21.83 | 21.23 |
| CDY43950 | Canola | nucleus | 24.3 | 21.23 |
| CDX88968 | Canola | cytosol | 23.24 | 21.22 |
| CDY67927 | Canola | cytosol | 23.24 | 21.22 |
| CDY06889 | Canola | cytosol | 22.18 | 21.21 |
| CDX97399 | Canola | nucleus | 23.94 | 21.18 |
| CDX89132 | Canola | cytosol | 24.3 | 21.17 |
| CDY57244 | Canola | cytosol | 22.89 | 21.1 |
| EES17728 | Sorghum | cytosol, mitochondrion, nucleus | 24.3 | 21.1 |
| TraesCS3B01G054400.1 | Wheat | cytosol | 21.83 | 20.88 |
| CDX89221 | Canola | nucleus | 23.59 | 20.81 |
| CDY19018 | Canola | nucleus | 23.59 | 20.81 |
| CDY56244 | Canola | cytosol | 21.13 | 20.76 |
| CDX67865 | Canola | nucleus | 23.59 | 20.74 |
| CDY25077 | Canola | nucleus | 23.59 | 20.74 |
| TraesCSU01G045900.1 | Wheat | cytosol | 21.83 | 20.74 |
| CDY14808 | Canola | cytosol | 21.83 | 20.53 |
| HORVU3Hr1G004880.2 | Barley | nucleus | 24.3 | 20.35 |
| EES17731 | Sorghum | nucleus | 24.65 | 20.23 |
| CDY06056 | Canola | cytosol | 18.66 | 20.23 |
| CDY35390 | Canola | nucleus | 21.83 | 20.2 |
| CDY22549 | Canola | nucleus | 21.83 | 20.06 |
| TraesCS3D01G029600.1 | Wheat | nucleus | 23.59 | 20.0 |
| TraesCS3B01G028900.1 | Wheat | cytosol | 21.13 | 19.93 |
| TraesCS3A01G031300.1 | Wheat | cytosol | 19.72 | 19.93 |
| TraesCS3A01G032200.1 | Wheat | nucleus | 23.59 | 19.71 |
| TraesCS3B01G052400.1 | Wheat | nucleus | 23.24 | 19.41 |
| TraesCS3D01G029300.1 | Wheat | nucleus | 23.24 | 19.41 |
| HORVU0Hr1G006120.2 | Barley | cytosol, nucleus, plastid | 18.66 | 18.93 |
| CDY67278 | Canola | cytosol | 5.28 | 18.52 |
| TraesCS2B01G594500.1 | Wheat | nucleus, plastid | 24.3 | 18.4 |
| TraesCS2D01G564800.1 | Wheat | nucleus, plastid | 24.3 | 18.4 |
| TraesCSU01G021700.1 | Wheat | nucleus | 23.59 | 18.36 |
| TraesCS2A01G589200.1 | Wheat | nucleus, plastid | 23.94 | 18.23 |
| OQU77425 | Sorghum | nucleus | 23.94 | 18.09 |
| TraesCS2A01G586400.1 | Wheat | nucleus | 23.24 | 18.08 |
| TraesCS2D01G600200.1 | Wheat | nucleus | 23.24 | 18.08 |
| TraesCS3B01G032300.1 | Wheat | cytosol | 12.68 | 18.0 |
| OQU77414 | Sorghum | mitochondrion, nucleus | 22.18 | 17.8 |
| HORVU2Hr1G118840.1 | Barley | plastid | 23.24 | 17.79 |
| OQU86453 | Sorghum | cytosol | 13.38 | 17.76 |
| TraesCS1D01G102900.1 | Wheat | nucleus | 23.59 | 17.54 |
| CDX75727 | Canola | cytosol | 13.03 | 17.29 |
| CDY01758 | Canola | cytosol | 26.41 | 17.16 |
| KXG21322 | Sorghum | nucleus | 22.54 | 17.11 |
| HORVU3Hr1G005270.1 | Barley | nucleus | 20.07 | 16.72 |
| HORVU0Hr1G006130.1 | Barley | nucleus | 19.37 | 16.67 |
| TraesCSU01G231400.1 | Wheat | nucleus | 20.07 | 16.47 |
| CDX82523 | Canola | cytosol | 12.32 | 16.36 |
| TraesCS1A01G070000.1 | Wheat | plastid | 13.73 | 16.05 |
| TraesCS3A01G032100.1 | Wheat | nucleus | 25.35 | 15.79 |
| TraesCS3D01G029400.1 | Wheat | nucleus | 25.0 | 15.47 |
| EES17735 | Sorghum | mitochondrion | 24.3 | 15.37 |
| TraesCS3B01G052300.1 | Wheat | nucleus | 25.0 | 15.3 |
| CDY38819 | Canola | nucleus | 10.21 | 14.95 |
| TraesCS3D01G029700.1 | Wheat | cytosol, mitochondrion, nucleus | 14.79 | 14.74 |
| TraesCS3B01G031100.1 | Wheat | nucleus | 20.77 | 14.57 |
| CDY67900 | Canola | cytosol, endoplasmic reticulum, plastid | 13.38 | 13.77 |
| CDY14650 | Canola | cytosol, nucleus, plastid | 10.56 | 13.57 |
| EES02574 | Sorghum | nucleus | 21.13 | 13.39 |
| CDY64066 | Canola | cytosol | 4.58 | 12.04 |
| CDY67899 | Canola | cytosol, plastid | 6.34 | 10.84 |
| Os05t0152700-00 | Rice | cytosol, extracellular | 0.7 | 2.02 |
Protein Annotations
| KEGG:00220+6.3.2.- | KEGG:00261+6.3.2.- | KEGG:00380+6.3.2.- | MapMan:19.2.2.1.5.3.5 | Gene3D:3.30.40.10 | InterPro:7-in-absentia-prot_TRAF-dom |
| GO:A0A078ITV2 | UniProt:A0A078ITV2 | EnsemblPlants:CDY52473 | ProteinID:CDY52473 | ProteinID:CDY52473.1 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006464 | GO:GO:0006511 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 |
| GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0019538 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00007069001 |
| InterPro:IPR001841 | InterPro:IPR008974 | InterPro:IPR013010 | InterPro:IPR013083 | PFAM:PF03145 | PFscan:PS50089 |
| PFscan:PS51081 | PANTHER:PTHR10315 | PANTHER:PTHR10315:SF43 | InterPro:SINA-like | SUPFAM:SSF49599 | SUPFAM:SSF57850 |
| InterPro:TRAF-like | UniPathway:UPA00143 | UniParc:UPI0004EE5956 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | InterPro:Znf_SIAH |
| SEG:seg | : | : | : | : | : |
Description
BnaA04g27970DE3 ubiquitin-protein ligase [Source:UniProtKB/TrEMBL;Acc:A0A078ITV2]
Coordinates
chrLK033093:+:76190..77314
Molecular Weight (calculated)
31059.2 Da
IEP (calculated)
7.206
GRAVY (calculated)
-0.127
Length
284 amino acids
Sequence
(BLAST)
(BLAST)
001: MVGVAETSDE VNGSSSSIPS SQKRKRSSVS SSGDGAKKRS LMLLDSDLLD CPICYEPLTV PIFQCDNGHL ACSSCCPKLS NKCPACASPI GDKRCRAMEN
101: VLESIFTPCP NAKMGCTKNV SYGKESTHLK QCSFSLCSCP VVNCRYAGSY KNLSDHYCLT HPDSECSDCF ICGLSFSVQT NISDKILVLW EYKKHLLFTV
201: ECFAEPYGVN VAVSCIAPCA PEVGEFSYNL SYTVDGHTVT YESPEVKRVL QVSGQTPQEN FMLIPHSLLR GDLLKMKLCI KSRS
101: VLESIFTPCP NAKMGCTKNV SYGKESTHLK QCSFSLCSCP VVNCRYAGSY KNLSDHYCLT HPDSECSDCF ICGLSFSVQT NISDKILVLW EYKKHLLFTV
201: ECFAEPYGVN VAVSCIAPCA PEVGEFSYNL SYTVDGHTVT YESPEVKRVL QVSGQTPQEN FMLIPHSLLR GDLLKMKLCI KSRS
001: MVGAAILESP GEGIGSNSIL SQKRQLSSSD AAKRDAKKRS TMLMDLEILD CPICYEAFTI PIFQCDNGHL ACSSCCPKLN NKCPACTSPV GHNRCRAMES
101: VLESILIPCP NAKLGCKKNV SYGKELTHEK ECMFSHCACP ALDCNYTSSY KDLYTHYRIT HMEINQINTF ICDIPLSVRM NISKKILIRT EHLTNHLFAV
201: QCFREPYGVY VTVSCIAPSS PELSQYSYAL SYTVDGHTVI YQSPEVKRVL KLSFQTPQEN FMLIPNSLLR GDVLEMRISV KKLNKE
101: VLESILIPCP NAKLGCKKNV SYGKELTHEK ECMFSHCACP ALDCNYTSSY KDLYTHYRIT HMEINQINTF ICDIPLSVRM NISKKILIRT EHLTNHLFAV
201: QCFREPYGVY VTVSCIAPSS PELSQYSYAL SYTVDGHTVI YQSPEVKRVL KLSFQTPQEN FMLIPNSLLR GDVLEMRISV KKLNKE
Arabidopsis Description
E3 ubiquitin-protein ligase SINA-like 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKD7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.