Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- nucleus 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G005260.1 | Barley | cytosol | 19.43 | 45.05 |
| CDY11709 | Canola | nucleus | 31.28 | 40.0 |
| CDX95911 | Canola | cytosol, nucleus, plastid | 50.71 | 36.39 |
| CDY01756 | Canola | cytosol, nucleus, plastid | 49.76 | 35.35 |
| CDX96140 | Canola | cytosol, nucleus, plastid | 54.5 | 32.95 |
| CDY52473 | Canola | nucleus | 38.86 | 28.87 |
| CDX99687 | Canola | nucleus | 37.91 | 28.27 |
| CDY01699 | Canola | nucleus, plastid | 36.97 | 27.66 |
| TraesCS3D01G028800.1 | Wheat | nucleus | 26.54 | 26.17 |
| CDY25763 | Canola | nucleus | 32.7 | 25.37 |
| CDY12498 | Canola | nucleus | 32.23 | 25.0 |
| VIT_14s0006g01870.t01 | Wine grape | cytosol | 23.7 | 25.0 |
| CDY27008 | Canola | nucleus | 38.86 | 24.92 |
| CDY47873 | Canola | nucleus | 37.91 | 24.69 |
| CDY10787 | Canola | plastid | 33.18 | 24.22 |
| TraesCS3B01G052800.1 | Wheat | cytosol | 28.91 | 21.63 |
| KRH42263 | Soybean | nucleus | 32.7 | 21.56 |
| HORVU3Hr1G004860.1 | Barley | cytosol | 25.59 | 21.43 |
| KXG32014 | Sorghum | nucleus | 22.27 | 21.36 |
| CDY01695 | Canola | nucleus | 31.28 | 21.36 |
| HORVU3Hr1G005320.1 | Barley | nucleus | 26.54 | 21.13 |
| KRH58384 | Soybean | nucleus | 31.75 | 20.94 |
| TraesCS3B01G053500.1 | Wheat | cytosol | 27.96 | 20.92 |
| TraesCS3A01G030800.1 | Wheat | cytosol | 27.01 | 20.73 |
| TraesCS3A01G062700.1 | Wheat | nucleus | 27.01 | 20.73 |
| TraesCS3D01G029000.1 | Wheat | cytosol | 27.49 | 20.57 |
| TraesCS3A01G031100.1 | Wheat | cytosol | 26.07 | 20.45 |
| KXG32008 | Sorghum | cytosol, nucleus, plastid | 25.59 | 20.3 |
| TraesCS3A01G031200.1 | Wheat | cytosol | 25.59 | 20.15 |
| CDY01758 | Canola | cytosol | 41.71 | 20.14 |
| TraesCS3D01G504900.1 | Wheat | nucleus | 26.07 | 20.07 |
| HORVU4Hr1G056260.1 | Barley | nucleus | 26.07 | 20.0 |
| TraesCS3B01G053000.1 | Wheat | cytosol | 26.54 | 19.93 |
| TraesCS3A01G030600.1 | Wheat | nucleus | 26.54 | 19.86 |
| TraesCS3B01G074800.1 | Wheat | cytosol | 26.07 | 19.86 |
| TraesCS3D01G031300.1 | Wheat | nucleus | 25.59 | 19.71 |
| TraesCS1A01G060800.1 | Wheat | nucleus | 28.44 | 19.54 |
| TraesCS4B01G363200.1 | Wheat | nucleus | 30.33 | 19.51 |
| CDY70665 | Canola | nucleus | 29.86 | 19.44 |
| TraesCS3B01G560800.1 | Wheat | nucleus | 25.59 | 19.42 |
| TraesCS3B01G032100.1 | Wheat | cytosol | 26.07 | 19.37 |
| TraesCS3A01G048300.1 | Wheat | nucleus | 25.12 | 19.34 |
| TraesCS5A01G531400.2 | Wheat | nucleus | 30.33 | 19.34 |
| KXG37942 | Sorghum | cytosol, nucleus, plastid | 24.17 | 19.17 |
| TraesCS3A01G062800.1 | Wheat | nucleus | 26.07 | 18.97 |
| TraesCS4D01G356400.2 | Wheat | nucleus | 29.86 | 18.75 |
| TraesCS5A01G228300.1 | Wheat | cytosol | 27.96 | 18.73 |
| TraesCS3B01G033800.1 | Wheat | nucleus | 24.17 | 18.61 |
| TraesCS3B01G050100.1 | Wheat | cytosol | 24.17 | 18.61 |
| TraesCS3B01G031200.1 | Wheat | nucleus | 25.59 | 18.49 |
| TraesCS3D01G030300.1 | Wheat | nucleus | 26.07 | 18.39 |
| HORVU3Hr1G004950.1 | Barley | nucleus | 26.07 | 18.33 |
| KXG32009 | Sorghum | nucleus | 25.59 | 18.24 |
| Solyc03g036460.1.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 18.96 | 18.1 |
| TraesCS3B01G053400.1 | Wheat | cytosol, nucleus, plastid | 25.12 | 18.09 |
| HORVU0Hr1G006120.2 | Barley | cytosol, nucleus, plastid | 23.7 | 17.86 |
| KXG37941 | Sorghum | cytosol | 23.7 | 17.86 |
| TraesCS2A01G446400.1 | Wheat | cytosol, nucleus, plastid | 22.75 | 17.84 |
| HORVU3Hr1G004880.2 | Barley | nucleus | 28.44 | 17.7 |
| HORVU3Hr1G004890.1 | Barley | nucleus | 25.12 | 17.67 |
| HORVU4Hr1G087120.3 | Barley | nucleus | 29.86 | 17.6 |
| TraesCS3B01G033700.1 | Wheat | nucleus | 24.17 | 17.47 |
| EES17728 | Sorghum | cytosol, mitochondrion, nucleus | 27.01 | 17.43 |
| Zm00001d041049_P001 | Maize | nucleus | 26.54 | 17.13 |
| TraesCS3A01G031300.1 | Wheat | cytosol | 22.75 | 17.08 |
| PGSC0003DMT400043050 | Potato | nucleus | 30.81 | 17.06 |
| CDX96138 | Canola | nucleus | 27.49 | 17.06 |
| TraesCS3B01G052700.1 | Wheat | nucleus | 20.38 | 17.0 |
| TraesCS1D01G061700.1 | Wheat | nucleus | 27.96 | 16.76 |
| TraesCS3D01G029600.1 | Wheat | nucleus | 26.54 | 16.72 |
| Solyc03g034460.2.1 | Tomato | nucleus | 28.44 | 16.67 |
| Solyc03g042550.1.1 | Tomato | nucleus | 28.44 | 16.67 |
| TraesCS3B01G050200.1 | Wheat | nucleus | 19.43 | 16.6 |
| OQU78944 | Sorghum | nucleus | 25.59 | 16.56 |
| OQU77414 | Sorghum | mitochondrion, nucleus | 27.49 | 16.38 |
| CDX83363 | Canola | cytosol, nucleus, plasma membrane | 13.74 | 16.2 |
| TraesCS3A01G030100.1 | Wheat | nucleus | 22.75 | 16.16 |
| TraesCS3B01G054400.1 | Wheat | cytosol | 22.75 | 16.16 |
| OQU77422 | Sorghum | cytosol | 21.8 | 16.08 |
| CDY36211 | Canola | nucleus | 27.49 | 16.07 |
| CDY67278 | Canola | cytosol | 6.16 | 16.05 |
| TraesCS3D01G015600.1 | Wheat | cytosol | 22.27 | 15.82 |
| Solyc03g034450.2.1 | Tomato | nucleus | 29.38 | 15.82 |
| TraesCS3B01G050900.1 | Wheat | cytosol | 21.8 | 15.75 |
| TraesCSU01G045900.1 | Wheat | cytosol | 22.27 | 15.72 |
| EES00387 | Sorghum | nucleus | 23.7 | 15.67 |
| HORVU1Hr1G012490.3 | Barley | nucleus | 24.64 | 15.66 |
| TraesCS3B01G050700.1 | Wheat | nucleus | 22.75 | 15.64 |
| TraesCS3B01G028900.1 | Wheat | cytosol | 22.27 | 15.61 |
| TraesCS3B01G052400.1 | Wheat | nucleus | 25.12 | 15.59 |
| TraesCS3A01G032200.1 | Wheat | nucleus | 24.64 | 15.29 |
| CDY14808 | Canola | cytosol | 21.8 | 15.23 |
| TraesCS3D01G029300.1 | Wheat | nucleus | 24.17 | 15.0 |
| EES17731 | Sorghum | nucleus | 24.17 | 14.74 |
| CDY06889 | Canola | cytosol | 20.38 | 14.48 |
| CDY35390 | Canola | nucleus | 20.85 | 14.33 |
| CDY57244 | Canola | cytosol | 20.85 | 14.29 |
| HORVU0Hr1G006130.1 | Barley | nucleus | 22.27 | 14.24 |
| CDY22549 | Canola | nucleus | 20.85 | 14.24 |
| KXG21322 | Sorghum | nucleus | 25.12 | 14.17 |
| OQU77425 | Sorghum | nucleus | 25.12 | 14.1 |
| TraesCS1D01G102900.1 | Wheat | nucleus | 25.12 | 13.87 |
| CDX71977 | Canola | cytosol | 20.38 | 13.87 |
| Solyc03g042520.1.1 | Tomato | nucleus | 20.38 | 13.87 |
| CDX88968 | Canola | cytosol | 20.38 | 13.83 |
| CDY67927 | Canola | cytosol | 20.38 | 13.83 |
| CDX92848 | Canola | nucleus | 19.91 | 13.77 |
| PGSC0003DMT400043047 | Potato | cytosol | 11.85 | 13.59 |
| CDX97399 | Canola | nucleus | 19.91 | 13.08 |
| CDX89221 | Canola | nucleus | 19.91 | 13.04 |
| CDY19018 | Canola | nucleus | 19.91 | 13.04 |
| CDX67865 | Canola | nucleus | 19.91 | 13.0 |
| CDY25077 | Canola | nucleus | 19.91 | 13.0 |
| HORVU2Hr1G118560.2 | Barley | nucleus | 17.06 | 12.86 |
| CDY56244 | Canola | cytosol | 17.54 | 12.8 |
| HORVU3Hr1G005270.1 | Barley | nucleus | 20.38 | 12.61 |
| CDY14268 | Canola | nucleus | 18.96 | 12.5 |
| TraesCS3B01G032300.1 | Wheat | cytosol | 11.85 | 12.5 |
| TraesCS3B01G031100.1 | Wheat | nucleus | 23.7 | 12.35 |
| CDY43950 | Canola | nucleus | 18.96 | 12.31 |
| CDX89132 | Canola | cytosol | 18.96 | 12.27 |
| EES17735 | Sorghum | mitochondrion | 25.59 | 12.03 |
| TraesCS3B01G052300.1 | Wheat | nucleus | 26.07 | 11.85 |
| CDY06056 | Canola | cytosol | 14.69 | 11.83 |
| TraesCS3A01G032100.1 | Wheat | nucleus | 24.64 | 11.4 |
| TraesCS3D01G029400.1 | Wheat | nucleus | 24.17 | 11.11 |
| TraesCS2A01G589200.1 | Wheat | nucleus, plastid | 18.96 | 10.72 |
| TraesCS2A01G586400.1 | Wheat | nucleus | 18.48 | 10.68 |
| TraesCS2D01G600200.1 | Wheat | nucleus | 18.48 | 10.68 |
| TraesCSU01G021700.1 | Wheat | nucleus | 18.48 | 10.68 |
| TraesCS2B01G594500.1 | Wheat | nucleus, plastid | 18.96 | 10.67 |
| HORVU2Hr1G118840.1 | Barley | plastid | 18.48 | 10.51 |
| TraesCS2D01G564800.1 | Wheat | nucleus, plastid | 18.48 | 10.4 |
| TraesCS1A01G070000.1 | Wheat | plastid | 11.85 | 10.29 |
| TraesCSU01G231400.1 | Wheat | nucleus | 16.59 | 10.12 |
| EES02574 | Sorghum | nucleus | 20.38 | 9.6 |
| TraesCS3D01G029700.1 | Wheat | cytosol, mitochondrion, nucleus | 12.32 | 9.12 |
| CDX75727 | Canola | cytosol | 8.53 | 8.41 |
| CDX82523 | Canola | cytosol | 8.53 | 8.41 |
| OQU86453 | Sorghum | cytosol | 8.53 | 8.41 |
| CDY14650 | Canola | cytosol, nucleus, plastid | 8.53 | 8.14 |
| CDY38819 | Canola | nucleus | 7.11 | 7.73 |
| CDY67900 | Canola | cytosol, endoplasmic reticulum, plastid | 9.95 | 7.61 |
| CDY01757 | Canola | cytosol | 0.95 | 3.77 |
| CDY67899 | Canola | cytosol, plastid | 2.37 | 3.01 |
| CDY64066 | Canola | cytosol | 1.42 | 2.78 |
| Os05t0152700-00 | Rice | cytosol, extracellular | 0.0 | 0.0 |
Protein Annotations
| KEGG:00220+6.3.2.- | KEGG:00261+6.3.2.- | KEGG:00380+6.3.2.- | Gene3D:3.30.40.10 | MapMan:35.1 | GO:A0A078HFL7 |
| UniProt:A0A078HFL7 | EnsemblPlants:CDY36209 | ProteinID:CDY36209 | ProteinID:CDY36209.1 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006511 |
| GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009056 | GO:GO:0009987 |
| GO:GO:0019538 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00060119001 | InterPro:IPR001841 | InterPro:IPR008974 | InterPro:IPR013010 |
| InterPro:IPR013083 | PFscan:PS50089 | PFscan:PS51081 | PANTHER:PTHR10315 | PANTHER:PTHR10315:SF43 | InterPro:SINA-like |
| SUPFAM:SSF49599 | InterPro:TRAF-like | UniPathway:UPA00143 | UniParc:UPI0004EE2538 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD |
| InterPro:Znf_SIAH | SEG:seg | : | : | : | : |
Description
BnaC06g27530DBnaC06g27530D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HFL7]
Coordinates
chrLK032370:-:31965..33941
Molecular Weight (calculated)
23456.3 Da
IEP (calculated)
7.519
GRAVY (calculated)
-0.179
Length
211 amino acids
Sequence
(BLAST)
(BLAST)
001: MRTANCTNHA VSLGIVKKMN AEQAFTGRAA SSSHHQKRQR RLPSTVEEEK VGENGGGTRS ETEARYGTMF DLDLLDCLVC CHALTNPIFQ CENGHIACSS
101: CCLKLRSKCP VCRCRIMERD VEVIIVPCPN AKHGCTEKFS YGKEIAHEKE CGFALCYCPT PNCKYTGVGA WLSTSEKILI LHESSDGPLV VLHWEILLSS
201: FLLVWRCNND V
101: CCLKLRSKCP VCRCRIMERD VEVIIVPCPN AKHGCTEKFS YGKEIAHEKE CGFALCYCPT PNCKYTGVGA WLSTSEKILI LHESSDGPLV VLHWEILLSS
201: FLLVWRCNND V
001: MSGEASTSRR KRQRVPSSVE SVENGGGDAV ARSGTLFELD LLDCPICCHA LTSPIFQCDN GHIACSSCCT KLRNKCPSCA LPIGNFRSRI MERVVEAVMV
101: TCPNVKHGCT EKFSYGKELI HEKDCRFALC YCPAPNCNYS GVYKDLYSHF YVNHYDTWNQ IGCGNFAGAW LRISEKILVL QYGQGPLIAV QCFKETQGMY
201: VTVNCIAPCA PGVGELSFEL SYKMPMGGNS TMMFKSEEMN RIQKVSFQTP EKDFMLVPYY FLGDFSTLKM EICIRKLKKD EEEADEDEES EEEEDDDDDD
301: DDDDEEEDAD EEE
101: TCPNVKHGCT EKFSYGKELI HEKDCRFALC YCPAPNCNYS GVYKDLYSHF YVNHYDTWNQ IGCGNFAGAW LRISEKILVL QYGQGPLIAV QCFKETQGMY
201: VTVNCIAPCA PGVGELSFEL SYKMPMGGNS TMMFKSEEMN RIQKVSFQTP EKDFMLVPYY FLGDFSTLKM EICIRKLKKD EEEADEDEES EEEEDDDDDD
301: DDDDEEEDAD EEE
Arabidopsis Description
E3 ubiquitin-protein ligase SINA-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6H3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.