Factsheet for Os08t0421850-00

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G225500.1	Wheat	mitochondrion	58.63	63.52
HORVU7Hr1G046920.1	Barley	mitochondrion	58.63	63.52
TraesCS7B01G194100.1	Wheat	mitochondrion	58.63	63.4
TraesCS7D01G229000.1	Wheat	mitochondrion	57.44	62.45
OQU80448	Sorghum	mitochondrion	52.31	53.4
Os09t0386200-01	Rice	plasma membrane	48.89	52.29
Zm00001d032264_P001	Maize	mitochondrion	51.11	52.18
GSMUA_Achr5P05220_001	Banana	mitochondrion	34.36	41.44
GSMUA_Achr3P06000_001	Banana	plastid	35.9	40.46
GSMUA_Achr7P19940_001	Banana	plastid	36.58	40.45
GSMUA_Achr10P...	Banana	cytosol	31.28	40.04
Os06t0238000-00	Rice	plasma membrane	35.38	39.96
GSMUA_Achr9P14450_001	Banana	plastid	31.45	39.57
Bra018108.1-P	Field mustard	cytosol	21.71	38.96
Os06t0238200-00	Rice	plasma membrane	32.48	38.7
CDY24151	Canola	cytosol	29.4	36.36
CDY69575	Canola	cytosol	29.91	35.86
PGSC0003DMT400001437	Potato	mitochondrion	28.72	34.57
Solyc02g087200.1.1	Tomato	mitochondrion	28.38	34.51
CDY36926	Canola	cytosol	29.74	33.85
CDY30728	Canola	cytosol	29.4	33.73
AT3G47820.1	Thale cress	cytosol	29.57	32.58
Bra029250.1-P	Field mustard	cytosol	30.43	32.25
KRH63473	Soybean	cytosol, plastid	28.89	32.19
Bra035890.1-P	Field mustard	mitochondrion, plastid	30.6	32.02
CDY16770	Canola	cytosol, mitochondrion	30.09	31.54
CDX87251	Canola	mitochondrion	30.26	31.44
AT5G62560.1	Thale cress	cytosol	29.91	31.31
KRH54443	Soybean	cytosol, mitochondrion	27.52	31.08
VIT_17s0000g07730.t01	Wine grape	cytosol, plastid	27.35	30.59
VIT_14s0066g01870.t01	Wine grape	cytosol, plastid	28.38	30.51
CDY44594	Canola	cytosol, plastid	28.21	30.05
Bra025605.1-P	Field mustard	cytosol, plastid	28.21	29.36
CDY53109	Canola	cytosol, plastid	27.69	29.24
Bra031875.1-P	Field mustard	mitochondrion	27.01	28.94
AT5G40140.1	Thale cress	plastid	27.01	28.73
CDY37807	Canola	mitochondrion	26.84	28.65
AT5G65200.1	Thale cress	cytosol, mitochondrion	27.18	28.6
CDY33979	Canola	mitochondrion	27.01	28.57
PGSC0003DMT400062863	Potato	cytosol	25.98	28.41
Solyc03g113870.1.1	Tomato	cytosol	25.64	28.41
KRG93403	Soybean	cytosol	25.47	26.23
KRH18582	Soybean	cytosol	26.67	25.7

Protein Annotations

Gene3D:1.25.10.110	MapMan:19.2.2.1.5.2.1	Gene3D:3.30.40.10	EntrezGene:9268476	InterPro:ARM-type_fold	InterPro:Armadillo
ProteinID:BAC24957.1	ProteinID:BAH94312.1	ProteinID:BAT05473.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003824
GO:GO:0004842	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000225	InterPro:IPR003613	InterPro:IPR013083
EnsemblPlantsGene:Os08g0421850	EnsemblPlants:Os08t0421850-00	PFAM:PF00514	PFAM:PF04564	PFscan:PS50176	PFscan:PS51698
PANTHER:PTHR23315	PANTHER:PTHR23315:SF221	UniProt:Q8H333	SMART:SM00185	SMART:SM00504	SUPFAM:SSF48371
SUPFAM:SSF57850	UniParc:UPI00000AD88E	InterPro:Ubox_domain	RefSeq:XP_015648503.1	InterPro:Znf_RING/FYVE/PHD	SEG:seg

Description

plant U-box-containing protein 17, U-box protein 17Similar to ubiquitin-protein ligase. (Os08t0421850-00)

Coordinates

chr8:-:20195730..20197487

Molecular Weight (calculated)

61748.1 Da

IEP (calculated)

7.097

GRAVY (calculated)

-0.104

Length

585 amino acids

Sequence
(BLAST)

001: MGAPRARRWK LLLPPFHSAK RKPPLPPPPP APVAVAPAPG KEEEEEVMPE EFLCPISGAP MADPVILPPG RTYERACVDA CAGLSLCPPG ASAATAAAIP
101: NDALRAAIRT WCARHGRAPP APPSAAEARE AALLRAVPAA AARTTTVAAM VPARSSSNLS CSSRASAAST SSSGSSSEMA TVEVPRAKEV AELRVAEAEE
201: EMEKEKEVAV LRVAEAEEEK EVAVLRVAEA KEEEEEVVMV VAKVVEKGDE DQVEAAMAVL LRETRESEER RRALCVPRLL AALRRVLHSK RHTPKAHADA
301: AAALANLTNE PENRIPIVRA GAVTALVEVL SLGTASPEAC EHAAGALFGL ALDEENRAAI GVLGAVQPLL DLFTSRDHAP RARRDAGMAL YHLSLSAVNQ
401: SKLARAPAAA KNLLSIASDS TTAEPMPIRR LALMVICNLA KCAEGRAALM DTGAVATVSA ILSDDTHRSE LEELCVVALF GMSRGNPRFR GLARAAGADR
501: PLILISERAP AGAHKEMARK ALRVVLGLGD DSERDLPDFM NSARNVNGIA GSSVPVHRRR AASWAAAPPA QTPPNAHQWR SVCID

Best Arabidopsis Sequence Match ( AT5G62560.1 )
(BLAST)

001: MGGNKQRWFS FHQRSSSATT TTLPQHKHDE TPPEFLCPIT GFLMSDPVVV SSGQTFERLS VQVCRNLGYI PDLLDGTRPD LSTVIPNLAM KSTIFSWCDR
101: QKVDHPRPPD AAYVEGVVRA RMDKDPNPSP GQSPGPGDKD PEPEILPPVE ENSPSDYDAV MEAIRARSKN SMSPTTSLES VTIGQSSYHP VRAVSMFSSS
201: TTSSSSGVFA GADSPFRNAM SFSSTDHSSS PMSPEEEEIF NKLRGTDIFD HEQGLILLRK MTRSSEDLRV SLCTDRILSF LRSLLVSRYN LVQTNAAASV
301: VNLSLEKQNK VKIVRSGFVP LLIDVLKSGT TEAQEHVAGA LFSLALEDEN KMVIGVLGAV EPLLHALRSS ESERARQDAA LALYHLSLIP SNRTRLVRAG
401: AVPTLLSMVR SGDSTSRILL VLCNLAACPD GKGAMLDGNA VAILVGKLRE VGGGDSEAAR ENCVAVLLTL CQGNLRFRGL ASEAGAEEVL MEVEENGNER
501: VKEKASKILL AMRGGGGGES EFGENAEARE WNRMLEATGL SRTQFQGGQN GGFAYSSQF

Arabidopsis Description

PUB41U-box domain-containing protein 41 [Source:UniProtKB/Swiss-Prot;Acc:Q0WUF6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.