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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os05t0368300-01 Rice nucleus 87.7 84.03
EES18108 Sorghum cytosol 87.3 83.65
TraesCS1A01G092900.1 Wheat golgi, nucleus 85.71 81.51
GSMUA_Achr11P... Banana cytosol 77.78 79.35
KRH69777 Soybean endoplasmic reticulum 82.94 79.17
KRH08064 Soybean nucleus 82.94 79.17
GSMUA_Achr5P27000_001 Banana cytosol 77.38 78.95
AT2G17360.1 Thale cress mitochondrion 81.75 78.93
KRH73264 Soybean endoplasmic reticulum 82.54 78.79
AT5G07090.1 Thale cress mitochondrion 81.75 78.63
AT5G58420.1 Thale cress mitochondrion 81.75 78.63
KRH14914 Soybean nucleus 82.14 78.41
Bra028708.1-P Field mustard cytosol 81.35 78.24
KRH65626 Soybean nucleus 81.75 78.03
KRH76010 Soybean endoplasmic reticulum 81.75 78.03
VIT_00s0252g00080.t01 Wine grape nucleus 33.73 77.98
Solyc06g007360.2.1 Tomato plastid 81.35 77.65
Solyc02g070360.2.1 Tomato nucleus 80.95 77.27
Solyc02g070340.2.1 Tomato mitochondrion 80.56 76.89
Solyc02g070330.2.1 Tomato mitochondrion 80.56 76.89
Solyc02g070350.2.1 Tomato nucleus, unclear 80.56 76.89
VIT_13s0067g01820.t01 Wine grape cytosol 75.0 76.83
Solyc02g070320.2.1 Tomato nucleus, unclear 80.16 76.52
PGSC0003DMT400054543 Potato mitochondrion 80.16 76.52
CDX70008 Canola cytosol 80.95 75.84
Solyc04g016350.1.1 Tomato nucleus, unclear 75.0 75.6
CDX91445 Canola cytosol 48.02 74.69
CDY02821 Canola cytosol 80.16 73.45
CDY58877 Canola cytosol 80.95 73.12
CDX81032 Canola extracellular 80.95 73.12
Bra005923.1-P Field mustard cytosol 80.56 72.76
VIT_08s0058g00390.t01 Wine grape mitochondrion, plastid 80.95 72.34
CDY60025 Canola cytosol 81.35 71.93
CDY32986 Canola cytosol 81.75 71.53
CDX91447 Canola cytosol, mitochondrion 13.89 71.43
CDX99006 Canola extracellular 81.35 71.18
CDY14056 Canola cytosol 81.35 70.45
GSMUA_Achr3P23970_001 Banana cytosol 84.92 70.39
CDY57385 Canola cytosol, plastid 82.14 69.46
GSMUA_Achr3P00760_001 Banana cytosol, plasma membrane 84.52 69.16
GSMUA_Achr2P01640_001 Banana cytosol 84.13 68.17
VIT_06s0004g07150.t01 Wine grape cytosol 80.95 67.55
PGSC0003DMT400052955 Potato cytosol 49.6 67.2
CDY05015 Canola cytosol 80.95 66.89
CDY32700 Canola extracellular 79.37 66.45
Bra020369.1-P Field mustard cytosol 78.97 66.11
CDY69841 Canola mitochondrion 81.35 65.92
VIT_00s0252g00100.t01 Wine grape cytosol, mitochondrion 22.62 63.33
Bra005118.1-P Field mustard cytosol 24.6 50.82
CDY54450 Canola cytosol 24.6 50.82
KRH04718 Soybean cytosol 38.49 50.52
CDY52257 Canola cytosol, mitochondrion 7.94 48.78
KRH04720 Soybean cytosol, endoplasmic reticulum 38.1 47.06
Bra033109.1-P Field mustard cytosol 15.87 34.19
CDY68858 Canola cytosol 15.87 34.19
CDY04355 Canola cytosol 19.84 25.51
CDY42359 Canola cytosol 7.14 14.52
CDY00352 Canola cytosol 7.14 13.85
CDY71580 Canola cytosol 6.35 13.56
CDY36197 Canola cytosol 5.56 10.85
Protein Annotations
MapMan:17.1.3.1.5Gene3D:2.30.30.30Gene3D:2.40.50.740Gene3D:3.10.290.40InterPro:40S_S4_CGO:GO:0003674
GO:GO:0003676GO:GO:0003723GO:GO:0003735GO:GO:0005198GO:GO:0005488GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005840GO:GO:0006412GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0019538InterPro:IPR002942InterPro:IPR014722
InterPro:IPR038237InterPro:KOWHAMAP:MF_00485PFAM:PD002667PFAM:PF00467PFAM:PF00900
PFAM:PF01479PFAM:PF08071PFAM:PF16121PIRSF:PIRSF002116ScanProsite:PS00528PFscan:PS50889
PANTHER:PTHR11581PANTHER:PTHR11581:SF10InterPro:Rib_L2_dom2InterPro:Ribosomal_S4eInterPro:Ribosomal_S4e_NInterPro:Ribosomal_S4e_N_CS
InterPro:Ribosomal_S4e_central_regionInterPro:Ribosomal_S4e_central_sfInterPro:S4_RNA-bdSMART:SM00363SMART:SM00739EnsemblPlantsGene:TraesCS1A01G232700
EnsemblPlants:TraesCS1A01G232700.1TIGR:cd00165TIGR:cd06087SEG:seg::
Description
No Description!
Coordinates
chr1A:+:406154225..406156119
Molecular Weight (calculated)
28394.0 Da
IEP (calculated)
10.723
GRAVY (calculated)
-0.338
Length
252 amino acids
Sequence
(BLAST)
001: MARGLKKHVK RLNAPKHWMV EKLGGAFAPK PSSGPHKARE CLPLILMLRN RLKYALTYRE VVSIMMQRHI MVDGEVRTDK TYPAGFMDVV SIPKTGENFR
101: LLYDTKGRFF KLCKVRTVQC GQKGVPSLNT YDGRTIRYPD PAIKPNDTIK IELDTNKIVD FIKFEVGNFV MVTGGRNTGR IGVIKSREKH EGSFETIHVE
201: DALSHQFATR LANVFTIGKD RKAWVSLPKG KGIKLTIIEE ARKRIAAAAA EA
Best Arabidopsis Sequence Match ( AT5G58420.1 )
(BLAST)
001: MARGLKKHLK RLNAPKHWML DKLGGAFAPK PSSGPHKSRE CLPLVLIIRN RLKYALTYRE VISILMQRHI QVDGKVRTDK TYPAGFMDVV SIPKTNENFR
101: LLYDTKGRFR LHSIKDEEAK FKLCKVRSIQ FGQKGIPYLN TYDGRTIRYP DPLIKPNDTI KLDLEANKIV EFIKFDVGNV VMVTGGRNRG RVGVIKNREK
201: HKGSFETIHI QDSTGHEFAT RLGNVYTIGK GTKPWVSLPK GKGIKLTIIE EARKRLASQQ AA
Arabidopsis Description
RPS4D40S ribosomal protein S4-3 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYK6]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.