Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY05185 | Canola | cytosol | 100.0 | 100.0 |
| VIT_05s0077g02060.t01 | Wine grape | mitochondrion | 76.67 | 67.65 |
| GSMUA_Achr9P16300_001 | Banana | cytosol, mitochondrion | 76.67 | 50.55 |
| GSMUA_Achr5P27080_001 | Banana | cytosol | 75.0 | 33.58 |
| GSMUA_Achr11P... | Banana | cytosol | 73.33 | 32.84 |
| CDY25018 | Canola | cytosol | 91.67 | 27.92 |
| OQU92626 | Sorghum | cytosol | 86.67 | 27.81 |
| EER97722 | Sorghum | cytosol | 86.67 | 27.81 |
| CDY66803 | Canola | cytosol | 91.67 | 27.5 |
| Zm00001d022462_P001 | Maize | plastid | 85.0 | 27.27 |
| Zm00001d009848_P001 | Maize | cytosol | 83.33 | 26.74 |
| TraesCS4D01G169400.1 | Wheat | cytosol, unclear | 83.33 | 26.74 |
| TraesCS4B01G166800.1 | Wheat | cytosol | 83.33 | 26.74 |
| Os03t0341100-01 | Rice | nucleus | 83.33 | 26.74 |
| EES17748 | Sorghum | cytosol | 83.33 | 26.6 |
| Os05t0155100-01 | Rice | nucleus | 83.33 | 26.6 |
| CDX74138 | Canola | extracellular | 93.33 | 26.29 |
| VIT_14s0060g01930.t01 | Wine grape | cytosol | 81.67 | 26.2 |
| TraesCS2A01G109900.1 | Wheat | plastid | 81.67 | 26.2 |
| TraesCS2B01G127900.1 | Wheat | cytosol | 81.67 | 26.2 |
| PGSC0003DMT400081310 | Potato | nucleus | 81.67 | 26.2 |
| PGSC0003DMT400063593 | Potato | cytosol | 81.67 | 26.2 |
| KRH68205 | Soybean | nucleus | 81.67 | 26.2 |
| TraesCS2D01G110100.1 | Wheat | golgi, unclear | 81.67 | 26.2 |
| HORVU2Hr1G018820.1 | Barley | cytosol | 81.67 | 26.2 |
| KRH33871 | Soybean | nucleus | 80.0 | 25.67 |
| KRG92914 | Soybean | nucleus | 80.0 | 25.67 |
| KRH68491 | Soybean | nucleus | 80.0 | 25.67 |
| TraesCS1A01G096500.2 | Wheat | cytosol | 80.0 | 25.67 |
| TraesCS1B01G127200.1 | Wheat | cytosol | 80.0 | 25.67 |
| Os07t0674700-01 | Rice | plasma membrane | 83.33 | 25.64 |
| TraesCS1D01G105500.2 | Wheat | golgi | 80.0 | 25.53 |
| CDX99969 | Canola | cytosol, plastid | 88.33 | 25.24 |
| KRG96455 | Soybean | nucleus | 78.33 | 25.13 |
| CDY05183 | Canola | mitochondrion | 91.67 | 24.66 |
| CDY19736 | Canola | cytosol | 88.33 | 24.65 |
| GSMUA_Achr2P01730_001 | Banana | cytosol | 81.67 | 24.38 |
| CDY40718 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 91.67 | 24.23 |
| CDX80616 | Canola | cytosol | 91.67 | 23.71 |
| CDY18813 | Canola | cytosol, mitochondrion | 93.33 | 22.49 |
| HORVU1Hr1G022570.1 | Barley | cytosol, plasma membrane | 80.0 | 22.12 |
| Zm00001d037603_P002 | Maize | cytosol | 83.33 | 21.74 |
| VIT_07s0005g00690.t01 | Wine grape | plastid | 80.0 | 21.33 |
| KRG96775 | Soybean | mitochondrion, nucleus | 80.0 | 21.24 |
| GSMUA_Achr8P10280_001 | Banana | cytosol | 80.0 | 19.35 |
| VIT_05s0077g02070.t01 | Wine grape | cytosol | 16.67 | 6.8 |
| HORVU2Hr1G018840.4 | Barley | cytosol | 10.0 | 6.59 |
| VIT_14s0036g01220.t01 | Wine grape | cytosol | 8.33 | 4.2 |
| CDY27753 | Canola | cytosol, mitochondrion | 6.67 | 3.39 |
| CDY46988 | Canola | cytosol | 3.33 | 2.41 |
| Solyc09g025200.1.1 | Tomato | extracellular | 1.67 | 1.39 |
Protein Annotations
| Gene3D:3.100.10.10 | MapMan:35.1 | GO:A0A078ET83 | UniProt:A0A078ET83 | EnsemblPlants:CDY36892 | ProteinID:CDY36892 |
| ProteinID:CDY36892.1 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00063011001 | PFAM:PF17135 | PANTHER:PTHR10934 |
| PANTHER:PTHR10934:SF3 | InterPro:Ribosomal_L18e | InterPro:Ribosomal_L18e/L15P | UniParc:UPI0004EF45FB | : | : |
Description
BnaC07g01080DBnaC05g46180D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ET83]
Coordinates
chrLK032386:-:221590..221892
Molecular Weight (calculated)
6697.3 Da
IEP (calculated)
12.204
GRAVY (calculated)
-0.685
Length
60 amino acids
Sequence
(BLAST)
(BLAST)
1: MVILGLDSVL LRGLKNSREA VKHFGPAPGV PHSHSKPYVR SKGRKFEKAR GKRKSRGFKV
001: MSKVNKAPLS LSRLVEFMTG KEDKIAVLVG TITDDLRVHE IPAMKVTALR FTERARARIE KAGGECLTFD QLALRAPLGQ NTVLLRGPKN SREAVKHFGP
101: APGVPHSHSK PYVRAKGRKF EKARGKRKSR GFKV
101: APGVPHSHSK PYVRAKGRKF EKARGKRKSR GFKV
Arabidopsis Description
RPL18BRPL18 [Source:UniProtKB/TrEMBL;Acc:A0A178V8M9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.