Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 4
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G05590.1 | Thale cress | nucleus | 78.48 | 93.58 |
| CDY05185 | Canola | cytosol | 24.66 | 91.67 |
| CDY36892 | Canola | cytosol | 24.66 | 91.67 |
| GSMUA_Achr9P16300_001 | Banana | cytosol, mitochondrion | 36.32 | 89.01 |
| CDY25018 | Canola | cytosol | 75.78 | 85.79 |
| CDY66803 | Canola | cytosol | 76.23 | 85.0 |
| CDX74138 | Canola | extracellular | 80.27 | 84.04 |
| VIT_14s0060g01930.t01 | Wine grape | cytosol | 70.4 | 83.96 |
| PGSC0003DMT400081310 | Potato | nucleus | 69.96 | 83.42 |
| KRH33871 | Soybean | nucleus | 69.06 | 82.35 |
| KRH68205 | Soybean | nucleus | 68.61 | 81.82 |
| OQU92626 | Sorghum | cytosol | 68.16 | 81.28 |
| KRG96455 | Soybean | nucleus | 68.16 | 81.28 |
| KRG92914 | Soybean | nucleus | 68.16 | 81.28 |
| TraesCS2A01G109900.1 | Wheat | plastid | 67.71 | 80.75 |
| CDX99969 | Canola | cytosol, plastid | 75.78 | 80.48 |
| KRH68491 | Soybean | nucleus | 67.26 | 80.21 |
| HORVU2Hr1G018820.1 | Barley | cytosol | 67.26 | 80.21 |
| EER97722 | Sorghum | cytosol | 67.26 | 80.21 |
| TraesCS2B01G127900.1 | Wheat | cytosol | 67.26 | 80.21 |
| TraesCS2D01G110100.1 | Wheat | golgi, unclear | 67.26 | 80.21 |
| GSMUA_Achr5P27080_001 | Banana | cytosol | 47.98 | 79.85 |
| TraesCS4D01G169400.1 | Wheat | cytosol, unclear | 66.82 | 79.68 |
| Zm00001d022462_P001 | Maize | plastid | 66.82 | 79.68 |
| TraesCS4B01G166800.1 | Wheat | cytosol | 66.82 | 79.68 |
| VIT_05s0077g02070.t01 | Wine grape | cytosol | 52.47 | 79.59 |
| CDY40718 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 80.72 | 79.3 |
| EES17748 | Sorghum | cytosol | 66.82 | 79.26 |
| Os03t0341100-01 | Rice | nucleus | 66.37 | 79.14 |
| PGSC0003DMT400063593 | Potato | cytosol | 66.37 | 79.14 |
| CDY19736 | Canola | cytosol | 76.23 | 79.07 |
| Zm00001d009848_P001 | Maize | cytosol | 65.92 | 78.61 |
| GSMUA_Achr11P... | Banana | cytosol | 47.09 | 78.36 |
| Os05t0155100-01 | Rice | nucleus | 65.92 | 78.19 |
| TraesCS1D01G105500.2 | Wheat | golgi | 65.02 | 77.13 |
| TraesCS1A01G096500.2 | Wheat | cytosol | 64.57 | 77.01 |
| TraesCS1B01G127200.1 | Wheat | cytosol | 64.57 | 77.01 |
| Os07t0674700-01 | Rice | plasma membrane | 65.47 | 74.87 |
| GSMUA_Achr2P01730_001 | Banana | cytosol | 67.26 | 74.63 |
| CDX80616 | Canola | cytosol | 76.23 | 73.28 |
| CDY18813 | Canola | cytosol, mitochondrion | 80.27 | 71.89 |
| VIT_07s0005g00690.t01 | Wine grape | plastid | 70.85 | 70.22 |
| VIT_05s0077g02060.t01 | Wine grape | mitochondrion | 21.08 | 69.12 |
| Bra040533.1-P | Field mustard | nucleus | 79.82 | 68.73 |
| HORVU1Hr1G022570.1 | Barley | cytosol, plasma membrane | 66.37 | 68.2 |
| KRG96775 | Soybean | mitochondrion, nucleus | 68.16 | 67.26 |
| HORVU2Hr1G018840.4 | Barley | cytosol | 26.91 | 65.93 |
| Zm00001d037603_P002 | Maize | cytosol | 65.92 | 63.91 |
| VIT_14s0036g01220.t01 | Wine grape | cytosol | 33.18 | 62.18 |
| GSMUA_Achr8P10280_001 | Banana | cytosol | 65.92 | 59.27 |
| CDY46988 | Canola | cytosol | 14.8 | 39.76 |
| CDY27753 | Canola | cytosol, mitochondrion | 20.63 | 38.98 |
Protein Annotations
| MapMan:17.1.2.1.18 | Gene3D:3.100.10.10 | GO:A0A078EZT8 | EnsemblPlants:CDY05183 | ProteinID:CDY05183 | ProteinID:CDY05183.1 |
| GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00119987001 | InterPro:L18e/L15P_sf | PFAM:PF17135 | PANTHER:PTHR10934 |
| PANTHER:PTHR10934:SF9 | InterPro:Ribosomal_L18e | InterPro:Ribosomal_L18e/L15P | SUPFAM:SSF52080 | UniParc:UPI0004EDDAD4 | SEG:seg |
Description
BnaC05g46200D
Coordinates
chrLK031960:+:230607..231710
Molecular Weight (calculated)
25187.8 Da
IEP (calculated)
11.556
GRAVY (calculated)
-0.481
Length
223 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSVFNMSWG YLRRRRRHHI PGGGGYNDQF DRVFFLQGID LIAGGKSKKT KRTAPKSDDV YLSSPESFYR FLVRRTQSKF NAVILKRLFM SKVNKAPLSL
101: SRLVEFMTGK EDKIAVLVGT ITDDLRVHEI PAIKVTALRF TERARASIEK AGGECLTFDQ LALRAPLGQN TVLLRGPKNS REAVKHFGPA PGVPHSHSKP
201: YVRSKGRKFE KARGKRKSRG FKV
101: SRLVEFMTGK EDKIAVLVGT ITDDLRVHEI PAIKVTALRF TERARASIEK AGGECLTFDQ LALRAPLGQN TVLLRGPKNS REAVKHFGPA PGVPHSHSKP
201: YVRSKGRKFE KARGKRKSRG FKV
001: MSKVNKAPLS LSRLVEFMTG KEDKIAVLVG TITDDLRVHE IPAMKVTALR FTERARARIE KAGGECLTFD QLALRAPLGQ NTVLLRGPKN SREAVKHFGP
101: APGVPHSHSK PYVRAKGRKF EKARGKRKSR GFKV
101: APGVPHSHSK PYVRAKGRKF EKARGKRKSR GFKV
Arabidopsis Description
RPL18BRPL18 [Source:UniProtKB/TrEMBL;Acc:A0A178V8M9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.