Factsheet for AT3G59000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT4G13960.2	Thale cress	cytosol	62.73	66.38
AT3G58820.1	Thale cress	cytosol	54.79	65.13
AT1G52650.1	Thale cress	cytosol	61.51	64.95
AT5G38390.1	Thale cress	vacuole	59.88	64.47
AT5G38386.2	Thale cress	cytosol	52.75	64.27
AT5G38396.1	Thale cress	cytosol	59.67	63.42
AT3G58950.1	Thale cress	cytosol	50.31	59.23
AT3G58910.1	Thale cress	cytosol, nucleus, peroxisome	25.66	58.88
AT3G58900.4	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	55.6	58.71
AT5G38392.1	Thale cress	cytosol	25.46	57.6
AT5G38391.1	Thale cress	cytosol	20.77	57.3
AT3G58930.1	Thale cress	cytosol	56.21	57.26
AT3G58860.1	Thale cress	cytosol	50.51	54.27
AT3G03040.1	Thale cress	cytosol	51.53	53.6
AT3G03030.1	Thale cress	cytosol	50.31	52.11
AT3G58880.1	Thale cress	cytosol	47.25	51.1
AT3G58890.1	Thale cress	extracellular	30.14	50.51
AT3G59210.1	Thale cress	cytosol, nucleus, peroxisome	40.33	40.91
AT3G59230.1	Thale cress	cytosol	40.53	40.53
AT3G59250.1	Thale cress	cytosol	34.62	40.0
AT4G14096.2	Thale cress	cytosol	37.68	39.53
AT3G59170.1	Thale cress	cytosol	37.88	39.32
AT3G58940.1	Thale cress	cytosol	49.49	39.32
AT3G59160.1	Thale cress	cytosol	37.07	39.22
AT2G42720.1	Thale cress	cytosol, nucleus, peroxisome	34.83	38.6
AT4G14103.2	Thale cress	cytosol	34.62	38.37
AT2G42730.1	Thale cress	cytosol	35.44	38.07
AT1G58310.1	Thale cress	cytosol	38.09	37.03
AT3G59200.1	Thale cress	cytosol	38.09	35.96
AT3G49150.1	Thale cress	cytosol	34.01	35.76
AT3G59240.1	Thale cress	cytosol	36.66	35.71
AT3G59150.1	Thale cress	cytosol	34.22	35.37
AT3G59190.2	Thale cress	cytosol, nucleus, plastid	37.07	35.07
AT5G41840.1	Thale cress	cytosol	38.49	35.0
AT5G41830.2	Thale cress	cytosol	35.23	33.66
AT4G00320.1	Thale cress	cytosol	34.62	33.53
AT3G59270.1	Thale cress	cytosol	22.4	32.84
AT5G41630.1	Thale cress	cytosol	30.35	32.75
AT3G59180.1	Thale cress	plasma membrane	31.36	32.42
AT5G35926.2	Thale cress	nucleus	25.87	29.33
AT1G56610.1	Thale cress	endoplasmic reticulum	30.14	27.66
GSMUA_Achr2P13780_001	Banana	cytosol	19.96	23.84

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	EntrezGene:825069	ProteinID:AEE79858.1	ProteinID:AEE79859.1	ArrayExpress:AT3G59000
EnsemblPlantsGene:AT3G59000	RefSeq:AT3G59000	TAIR:AT3G59000	RefSeq:AT3G59000-TAIR-G	EnsemblPlants:AT3G59000.1	TAIR:AT3G59000.1
EMBL:BT030471	ProteinID:CAB86928.1	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	InterPro:FBD	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016567	GO:GO:0019538
InterPro:IPR001810	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt_2	RefSeq:NP_001030887.1	RefSeq:NP_191459.2
PFAM:PF07723	PFAM:PF12937	PO:PO:0000013	PO:PO:0000037	PO:PO:0000084	PO:PO:0000230
PO:PO:0000293	PO:PO:0001017	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185
PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115
PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006
PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031
PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038
PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025195	PO:PO:0025281	PFscan:PS50181
PANTHER:PTHR31639	PANTHER:PTHR31639:SF6	UniProt:Q2V3N5	SMART:SM00256	SMART:SM00579	SUPFAM:SSF52047
SUPFAM:SSF81383	UniParc:UPI000034F02C	SEG:seg	:	:	:

Description

F-box protein At3g59000 [Source:UniProtKB/Swiss-Prot;Acc:Q2V3N5]

Coordinates

chr3:+:21799248..21801804

Molecular Weight (calculated)

55728.6 Da

IEP (calculated)

4.634

GRAVY (calculated)

0.041

Length

491 amino acids

Sequence
(BLAST)

001: MDRVGSLPDE LLSHILSFLT TKEAALTSLL SKRWRYLIAF VPNLAFDDIV FLHPEEGKPE RDEIRQSFMD FVDRVLALQA ESPIKKFSLK CRIGVDSDRV
101: DGWISNVLNR GVSELDLLII LGMTMEDSYR LSPKGFASKT LVKLEIGCGI DISWVAGSIF LPMLKTLVLD SVWFYVDKFE TLLLALPALE ELVLVDVNWL
201: DSDVTISNAS LKTLTIDSDG HLGTFSFDTP SLVYFCYSDY AAEDYPVVKM ENLREARIFL LVTDNEIERV RLPINDGLED AMDNVVLRFG HVGKLMNGIR
301: NVEYLELSAD TLEVLSLCCE SMPVFKNLKS LAIKSTEGRG WQAMPVLLRN CPHLEFLLIE GLLHHVTDKC GDACDCVPRE DKGRSLTSCP VNMLEIHGFR
401: GTKKEMQMIK HFLDYFPSLK EMDIYADEDG PTNLEAPGMF EQITQLFTLY DEFYTCDVQF MVRGSLYKKL TAQCCVFKEE NLPHRLVRTL G

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.